Os02g0795000

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Revision as of 02:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0795000| Description = Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein| Version = NM_001054916.1 GI:115449202 GeneID:4...")
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Gene Name

Os02g0795000

Description

Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein

Version

NM_001054916.1 GI:115449202 GeneID:4331000

Length

6395 bp

Definition

Oryza sativa Japonica Group Os02g0795000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34684227..34690621

Sequence Coding Region

34684344..34684595,34684986..34685100,34685517..34685627,34685735..34685907,34686006..34686332
,34686435..34686560,34687183..34688493,34688589..34688750,34688917..34689640
,34689726..34689819,34690192..34690354

Expression

GEO Profiles:Os02g0795000

Genome Context

<gbrowseImage1> name=NC_008395:34684227..34690621 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34684227..34690621 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgggggaggcggaggaggggctgatgcacaggaggattgagttccacgcggcgaggaggccgccgcgtgcggtggagggggcgggagggaggttttgggtggagatcctgagcccggatgccgataaggcggcggtggtggcggcggcgaggagcgaggggctggtcagggggttggagaagggggagggtagcgggggtgggatcgacccggagcttcgcgtcgcgaggatgtacttgcggagaattggagctggcttgcaaaattttggcaatacctgctacctcaactcggttctgcaatgcttgacgtataccgagccgttcgtggcctacttgcagagtggggagcacatgtcctcatgtcggactatcggattctgtgctttatgtgctcttcaaagacatgtaaattctgctctacagtcaactgggaagatattgagacctgtgcacattgtcagaaatttaagatgcatttctcgtagtttccgcatctcaaggcaggaagacgcacatgagctaatggttagcttgcttgagtccatgcacaaatgttgtttaccttctggtgtaccaagtgggtcgccaagtgcttatgagaagagcctagttcacagaatatttggtggtctcttaagaagtcaggtgagatgcacaacttgctcacactgttccaacaaatttgatcctttcctggatctcagccttgaaattgccaatgctgctactctggtaaaagcacttcaacactttactgcggaagagctactggatggtggggaaaagcagtacaactgcgagcactgcaggcagaaagtagtagccaagaagaggtttatgattgagaaggctccctctgtgttgacaattcatctaaagcgctttagtcctttcaaccctcgtcacaagatcgacaaaaaagtgcagtttcaaccaactttaaatttaaagccatatgtcagcaatcctgagggtatggagttcaaatacagcctttatggtgttttggttcatgctggttggaatacacagtcaggtcactattattgctttgttcggacttctagtggcatatggcacaatcttgatgataacaaggtttaccaagttcgtgaggcagatgtgctgaggcagaaagcatacatgctattttatgtgcgcgacagaacaaggagctcagtgatgtacagtgataattgtactgttaatttatcagtaaataaaatgatctccgagaagatcacatgtatgaatggttcaattaaaaaagatacagtggaaacgaaaacactgagagttccctcacttgtcaaagaagatgtgaacttgaagaaacagaactcagaaaatggtcaatctagcaatattagcaatgctccacaggaccagtgttcaaaaagtcatagcaacactgaagtgcttgaagctgcagcatccccaaacaatgacccagcttcaacacagaaagcttcttgcatacgtccagatacagctgctgttaacttgcccatgaaaacagagcaaacagctccagacaatcgaagggaaataacatctccagcacaagctgatgtttctgttcttcacaatgcaagtttcaatcagaagttgtatgagaagcagctacaggagcatcaactagaaactgatgatgcacttactgattccaggaaagatgcccctgctgccttgtgcacatatggtgttggggatggtttgttggggagaaatggccagtcttctgaacctcacataggtccatgccctgctgctcttcctatacacaatggtggtgaaggattgctgggggcaaatggccaggcatctgaagctcactcaggtccttgctcttctgcctttcctatacataatggtggcgaaggattgttgggggcaagtggccagtcttctgaacctcacacaggtccatgccctgctgctcttcctatacacgatggtggtcaaggattattggggccaaatggccaggcttctgaacctcacacagattcttgccctgctgcctttcctatacacagtggcggtgaaggactgttgggggcaaatggtcaggcttctgaacttcacacagatccttgccctgctgcctttcctatacacagtggcggtgaaggattgttgggggcaaatggtcaggcttctgaacctcacacagatccttgccctgctgcctttcctatacacagtgccggtgaaggattgttgggggcaaatggccaggattctgaacatcgaacaggtccaatccctgctgcctttcctgtatggaatggcactggtgtaatattggagaaatatggtcaggtttctgggccagcagatccattttgcaagccaactcctaccataagtgatacagtgtctattgcacaaatcatcccaactgagcatgctgctgtttctaatggaacagtatctagtagtgatgatttaactggcaatactgaagctaacgagtcatcagagtttgtaaagaattacggcgaacaagttatggtgagggatctttctgcagagacctctggtgatagagcaaatgcagatgagcagacttcaatgcagaataacacactggaagttggtaaggatgttgcaaaggacactgataatgtggcaaatgccgaggagcaggtattgaaccaccccttggccgagcaggtaaaatctgagaagcaaatatatcctggaatttctacaacattgatttgctctgaagacacaacacagttgatagataaggatacaggcagtggcaaattaaataaaaagatgaattgcaagtcaaagaggcaagtgaagtatcctgctgttcgcatgttttttgggcccaaacaactgttactggcatcagtaaaactgcacaagaaaaggaaacacaagagatccaaaaaacaccatgcactttctgtgcacattgaaagcatcatcactgatcagcagacatcaacatcagaaactgttttctcaaagatcatatcacataaatcccgtggacagaaacgttcttgtgccagtgcaagttctgaggatggcactcagctgttcaacaagaaacagcatatcgaaggaaccaccaacagtgttcccatggacaacaacgatacaaaacttgctagcgctgacagcaacgatgcaaaacttgctagcgccgagctaccaagctcatgtacaaactctctggtgaaccagactgattcaagaaacaatgtaaatgcaaatgagagaggcccctggcattttaatctcctcacaaggggtttaagagaaattactgtgccacgttgggatgacactgagattaaaaatacgaaggaaacagagatactacatccaaggactagaagcatcggctatgtgctagatgaatgggacgaggagtatgatcgcggcaagagaaagaagatcaggaaaccaaagcatggcttcagtgggccgaaccctttccaggagacggccaacatcagatcacggcagaggatgagactacagtctgaccagaccaaatctgggaaccagcctctcaggatataa</cdnaseq>

Protein Sequence

<aaseq>MMGEAEEGLMHRRIEFHAARRPPRAVEGAGGRFWVEILSPDADK AAVVAAARSEGLVRGLEKGEGSGGGIDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQ CLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQSTGKILRPVHIVRNLRC ISRSFRISRQEDAHELMVSLLESMHKCCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQV RCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVV AKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSL YGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQKAYMLFYVRDRT RSSVMYSDNCTVNLSVNKMISEKITCMNGSIKKDTVETKTLRVPSLVKEDVNLKKQNS ENGQSSNISNAPQDQCSKSHSNTEVLEAAASPNNDPASTQKASCIRPDTAAVNLPMKT EQTAPDNRREITSPAQADVSVLHNASFNQKLYEKQLQEHQLETDDALTDSRKDAPAAL CTYGVGDGLLGRNGQSSEPHIGPCPAALPIHNGGEGLLGANGQASEAHSGPCSSAFPI HNGGEGLLGASGQSSEPHTGPCPAALPIHDGGQGLLGPNGQASEPHTDSCPAAFPIHS GGEGLLGANGQASELHTDPCPAAFPIHSGGEGLLGANGQASEPHTDPCPAAFPIHSAG EGLLGANGQDSEHRTGPIPAAFPVWNGTGVILEKYGQVSGPADPFCKPTPTISDTVSI AQIIPTEHAAVSNGTVSSSDDLTGNTEANESSEFVKNYGEQVMVRDLSAETSGDRANA DEQTSMQNNTLEVGKDVAKDTDNVANAEEQVLNHPLAEQVKSEKQIYPGISTTLICSE DTTQLIDKDTGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASVKLHKKRKHKRSK KHHALSVHIESIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDGTQLFNKKQHI EGTTNSVPMDNNDTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVNANERGPWH FNLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRK PKHGFSGPNPFQETANIRSRQRMRLQSDQTKSGNQPLRI</aaseq>

Gene Sequence

<dnaseqindica>118..369#760..874#1291..1401#1509..1681#1780..2106#2209..2334#2957..4267#4363..4524#4691..5414#5500..5593#5966..6128#gccgaggcgaaaaatcacactatccaatcccaaaatcgatcgaagccgcaggttttaatccgagaaattgccccgaaaatccggtgatcctccgatccgtgcgagcgcgaaaaccctatgatgggggaggcggaggaggggctgatgcacaggaggattgagttccacgcggcgaggaggccgccgcgtgcggtggagggggcgggagggaggttttgggtggagatcctgagcccggatgccgataaggcggcggtggtggcggcggcgaggagcgaggggctggtcagggggttggagaagggggagggtagcgggggtgggatcgacccggagcttcgcgtcgcgaggatgtacttgcggagaattgtgagtgtgtaagcctgcaatttttcgtttcacattttgttgaatctaggtagcatagtatatacatgtagggtaggtggttttagttgttgcagttcagattattagaggggttttggtttacgaatagaatcagtaattataagatacattttatgaattttccttcagaaatgctggtttgttgttctgtaatgaaaaaaatatattcacgtttaactgtattatgttttgtttagaatacattttggaatagttatgcgcaaaaatttgcatccgcgtattgaaggtcctttttactggagtaatctgctcattcacctgaaacacgaggctttgcaagtgaatacttcactaaagatgccctattgccctatctatgtaaaacagggagctggcttgcaaaattttggcaatacctgctacctcaactcggttctgcaatgcttgacgtataccgagccgttcgtggcctacttgcagagtggggagcacatgtcctcatgtaagttcattgcgtctggtcgcgatcagcaattcagatactctgcatgatatgatgatgttgtcaatgaaagtcgagagtagtgaaccatcctttgttgctgtctgtgagcactctgcattttcttatcggatgttctatggtggtggttatcaaatatatttcctctctctataatcagtctcgaggcatctagagctagagctgcttcttatctatttggattgaacgaaacagatataaattttagtttacatgccttgaccaatgtactatgtctcatcacctgttctggagcaacctctgttttttgcggctgtatcatttctccagagaacaatataataacattttctgttttcttggcaagccctgtttctgtagttacttataatatcactttattattttttaaggtcggactatcggattctgtgctttatgtgctcttcaaagacatgtaaattctgctctacagtcaactgggaagatattgagacctgtgcacattgtcagaaatttaagatgtatcctttcatatgctattgcaaaataattgatccactttattttgaaataccgtatctatctataattttattcaacccttgtgcaatctttaactgcaaggtaggcatttctcgtagtttccgcatctcaaggcaggaagacgcacatgagctaatggttagcttgcttgagtccatgcacaaatgttgtttaccttctggtgtaccaagtgggtcgccaagtgcttatgagaagagcctagttcacagaatatttggtggtctcttaagaagtcaggtaaattgccaaatgcttaattaacttattactagtataatagcaagtaaaactttacccatatggccactggctgactatatctatatgcatgacaggtgagatgcacaacttgctcacactgttccaacaaatttgatcctttcctggatctcagccttgaaattgccaatgctgctactctggtaaaagcacttcaacactttactgcggaagagctactggatggtggggaaaagcagtacaactgcgagcactgcaggcagaaagtagtagccaagaagaggtttatgattgagaaggctccctctgtgttgacaattcatctaaagcgctttagtcctttcaaccctcgtcacaagatcgacaaaaaagtgcagtttcaaccaactttaaatttaaagccatatgtcagcaatcctgaggtatgtaatttttaatggtgttcttttttttttaacataagtttggacatgtttttaataagattctctttcatgctcatagtccttagtttatgtgtgtagggtatggagttcaaatacagcctttatggtgttttggttcatgctggttggaatacacagtcaggtcactattattgctttgttcggacttctagtggcatatggcacaatcttgatgataacaaggttattcttttttatgttgtgatgaatttattcttactgtttatcattgacacaacccttttttacattaatgcaagtcacatccttgtattgtgccatattgcttttttaaagttactcttttttttcttttgcctccatcaaccatgtcttgtcctgtgtaataacaaataccagccaaaatacaccatgttatatccaaaaacattcaatggtgaagtcgaccaactctatagtctatacttatgtccctcactctctgctcacaagagttcaccttgtaatatgtcttcttaaaatagtactagtactttatgaatgctagagaacttgttttgtcaggcaccttcttcgtgcactatattatgtagtggtctacagtcaacttaagggaggatatggggaatgtgttcactttgagggatggagggtaatccttttctttggcctgtttatgtgttcattttctgttggtgggattggtacaccaagttgtagttgagctgatcttatgttaattcagtactttctcatctgcactcctggcattctttattcagtttcttcctctctttttttttattttgaagtttgttttgttgatatacattaatacacccaggtttaccaagttcgtgaggcagatgtgctgaggcagaaagcatacatgctattttatgtgcgcgacagaacaaggagctcagtgatgtacagtgataattgtactgttaatttatcagtaaataaaatgatctccgagaagatcacatgtatgaatggttcaattaaaaaagatacagtggaaacgaaaacactgagagttccctcacttgtcaaagaagatgtgaacttgaagaaacagaactcagaaaatggtcaatctagcaatattagcaatgctccacaggaccagtgttcaaaaagtcatagcaacactgaagtgcttgaagctgcagcatccccaaacaatgacccagcttcaacacagaaagcttcttgcatacgtccagatacagctgctgttaacttgcccatgaaaacagagcaaacagctccagacaatcgaagggaaataacatctccagcacaagctgatgtttctgttcttcacaatgcaagtttcaatcagaagttgtatgagaagcagctacaggagcatcaactagaaactgatgatgcacttactgattccaggaaagatgcccctgctgccttgtgcacatatggtgttggggatggtttgttggggagaaatggccagtcttctgaacctcacataggtccatgccctgctgctcttcctatacacaatggtggtgaaggattgctgggggcaaatggccaggcatctgaagctcactcaggtccttgctcttctgcctttcctatacataatggtggcgaaggattgttgggggcaagtggccagtcttctgaacctcacacaggtccatgccctgctgctcttcctatacacgatggtggtcaaggattattggggccaaatggccaggcttctgaacctcacacagattcttgccctgctgcctttcctatacacagtggcggtgaaggactgttgggggcaaatggtcaggcttctgaacttcacacagatccttgccctgctgcctttcctatacacagtggcggtgaaggattgttgggggcaaatggtcaggcttctgaacctcacacagatccttgccctgctgcctttcctatacacagtgccggtgaaggattgttgggggcaaatggccaggattctgaacatcgaacaggtccaatccctgctgcctttcctgtatggaatggcactggtgtaatattggagaaatatggtcaggtttctgggccagcagatccattttgcaagccaactcctaccataagtgatacagtgtctattgcacaaatcatcccaactgaggtaactgtatgatgtttcctattgatctctctctctttttaatttttaaacacattattaatgttaattctgctgctcacatcacaatatggcagcatgctgctgtttctaatggaacagtatctagtagtgatgatttaactggcaatactgaagctaacgagtcatcagagtttgtaaagaattacggcgaacaagttatggtgagggatctttctgcagagacctctggtgatagagcaaatgcagatgagcaggtatttcctctctaccttttatgttgtttgcagatgtattttcatccatgctgtggtcccatattacaatggatataccatgtgttctctgctgttctatgcatgaaaacagaccttttattcgtattggtgcatgtaagtttatttgttaaaaactactttgcagacttcaatgcagaataacacactggaagttggtaaggatgttgcaaaggacactgataatgtggcaaatgccgaggagcaggtattgaaccaccccttggccgagcaggtaaaatctgagaagcaaatatatcctggaatttctacaacattgatttgctctgaagacacaacacagttgatagataaggatacaggcagtggcaaattaaataaaaagatgaattgcaagtcaaagaggcaagtgaagtatcctgctgttcgcatgttttttgggcccaaacaactgttactggcatcagtaaaactgcacaagaaaaggaaacacaagagatccaaaaaacaccatgcactttctgtgcacattgaaagcatcatcactgatcagcagacatcaacatcagaaactgttttctcaaagatcatatcacataaatcccgtggacagaaacgttcttgtgccagtgcaagttctgaggatggcactcagctgttcaacaagaaacagcatatcgaaggaaccaccaacagtgttcccatggacaacaacgatacaaaacttgctagcgctgacagcaacgatgcaaaacttgctagcgccgagctaccaagctcatgtacaaactctctggtgaaccagactgattcaagaaacaatgtaaatgcaaatgagagaggcccctggcattttaatctcctcacaaggggtttaagagaaattactggttaacatctcttcgcaagaaatttctcattttccatcctgctgtcaacactagaaatttataactcattgttttgtttttgcagtgccacgttgggatgacactgagattaaaaatacgaaggaaacagagatactacatccaaggactagaagcatcggctatgtgctagatgaatggtaagcctgttaactgcagttaaatttctttctgatggtgatgttggatgtctcaattctcttgatgctgaaattcggaaaatcctccacccataccaaatctttgctaaacttctgagtaatatacgaacaactggcaggaacataacactggttcctaggtccgacttgaactaattttagaatcctactagaatatgcaaccagcagcagattcttctttgctgtgactaagatctgagatgaatataaagccctcttctttttttgtatatatctcggttttcctcttgcctgtttgttatccttgaaactgtcttattcggaagataaacatgatccttaacaagatgcacctaatcgttgtgtcagggacgaggagtatgatcgcggcaagagaaagaagatcaggaaaccaaagcatggcttcagtgggccgaaccctttccaggagacggccaacatcagatcacggcagaggatgagactacagtctgaccagaccaaatctgggaaccagcctctcaggatataattgatatactggagcagcaacctgttgttgtatccttcagttttggaacagtaactacttctctagtagaactattatcctccccatgttttttttttcagttatgtgtagtgtcatcagagagtaagatttaggcctcatggctcagtcatttgtctgattgattagccgaggaacgaagcggactcttgtttgttgtcccatttctgtcgagcttatcatgccaatttttttttacgtcaatgcattcacacgtgttattcatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0795000, RefSeq:Os02g0795000