Os02g0798200

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Revision as of 02:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0798200| Description = Zinc finger, RING-type domain containing protein| Version = NM_001054936.1 GI:115449242 GeneID:4331022| Length = 174...")
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Gene Name

Os02g0798200

Description

Zinc finger, RING-type domain containing protein

Version

NM_001054936.1 GI:115449242 GeneID:4331022

Length

1749 bp

Definition

Oryza sativa Japonica Group Os02g0798200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34863475..34865223

Sequence Coding Region

34863809..34863967,34864086..34864216,34864493..34864835

Expression

GEO Profiles:Os02g0798200

Genome Context

<gbrowseImage1> name=NC_008395:34863475..34865223 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34863475..34865223 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtactgatggccgggatgcttcccggagtggagtgcgcgcggcggcgacgtctccggcagggcggcggggaggcgccgtgcgggacgcggcggccgtcattgtgcctgtacgccggcggccacgaccacgccctccttggctcctccgcttgtaagcagcagaggagcgcgtgcgaggagcagcagcccgggtggtggacgctggacagcaacgtgcgggaggcgaaggagaggctggaccagaagctgcggagccagagggaatccgccgtcgtcgtcgtcaagaggcataacaaagcgcaggtggcaggaacgagcagtgacggcggcgagcagtcaacggcaactacggcggcgccgcagtgggaggtgtacacgaggaaagaagggcggcggcggatgtggttcaggaggttggggcggaggccgacgccggaggaggaggaggagtgcgcggtgtgtctagaggagctgcgtgccggggaggcggtggcgcacctcccctgcacgcaccgcttccactggggctgcgccgtgccatgggtccagaccgcctcccgctgccccgtctgtcgcgccgccgtctacctcacctcaccggcgccggcggccagcaacaactacaactag</cdnaseq>

Protein Sequence

<aaseq>MVLMAGMLPGVECARRRRLRQGGGEAPCGTRRPSLCLYAGGHDH ALLGSSACKQQRSACEEQQPGWWTLDSNVREAKERLDQKLRSQRESAVVVVKRHNKAQ VAGTSSDGGEQSTATTAAPQWEVYTRKEGRRRMWFRRLGRRPTPEEEEECAVCLEELR AGEAVAHLPCTHRFHWGCAVPWVQTASRCPVCRAAVYLTSPAPAASNNYN</aaseq>

Gene Sequence

<dnaseqindica>335..493#612..742#1019..1361#atgcgttagagagagagagagagagagagtgcatgagcatgatgagctctccttctccctctccttaatttagacataaacttaattagctatgccgctcctctctctaatctcccctccaaagattatggttggtaggagatggatgagttcctgatcatcttcttgctctaaaatggaaggtttccaatggattccagcttctgaatcttgcagctagctaggtaggtaggtagctggtagcttagctaggcagtcaggcagatggtgtgttgttgcttctgctgtgatcgctcgcatacgtagataaggttagaggttgatcgctcggtagatggtactgatggccgggatgcttcccggagtggagtgcgcgcggcggcgacgtctccggcagggcggcggggaggcgccgtgcgggacgcggcggccgtcattgtgcctgtacgccggcggccacgaccacgccctccttggctcctccgcttgtaaggtagagatttcgagatcatgaactaatgttacatcttttttaaacacaaatacaggacaatcatagatcagatattgaatttgaaatcgcggtatttggaattggaattatgttgcagcagcagaggagcgcgtgcgaggagcagcagcccgggtggtggacgctggacagcaacgtgcgggaggcgaaggagaggctggaccagaagctgcggagccagagggaatccgccgtcgtcgtcgtcaagaggtgctcctctaatactccctccgtttttaaatgtttgacaccgttaactttttagcacatatttaaccgttcgtcttatttaaaaaattttatgaaatatgtaaaactatatacatacataaaaaagaattaataattacttaatttttttaataaaacaaatggtcaaacatgtttaaaaaaatcaatggcgtcaattatttagaaatagagggagtataatctaatctccttgagtttgactgtttactaataattaattttgcatgcatgcaggcataacaaagcgcaggtggcaggaacgagcagtgacggcggcgagcagtcaacggcaactacggcggcgccgcagtgggaggtgtacacgaggaaagaagggcggcggcggatgtggttcaggaggttggggcggaggccgacgccggaggaggaggaggagtgcgcggtgtgtctagaggagctgcgtgccggggaggcggtggcgcacctcccctgcacgcaccgcttccactggggctgcgccgtgccatgggtccagaccgcctcccgctgccccgtctgtcgcgccgccgtctacctcacctcaccggcgccggcggccagcaacaactacaactagctagacggaagcggatcctccaacgtaaactttctcctgacgcggttactgatatgtggacccgtgaacgatgggatctatatgtcagtcacatgttcctttgacttcctaatcccaactagacagcttattaaacggatcgccagttcgccgctgctaactgtcactggtcactactacccgcatcctttaattttgattgattccatcaacttaattatatatcgtcgtttcctctcgcatctcctggtctctctctaccatgcacatgtcgcctgcctatgctacagtattatgtctcgatcaaactctctgtaatagtgtacttcctccgtttaacaatgtaagttgttatagtatttctcacatttatatatttagattcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0798200, RefSeq:Os02g0798200