Os02g0802200

From RiceWiki
Revision as of 02:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0802200| Description = Glycoside hydrolase family 79, N-terminal protein| Version = NM_001054955.1 GI:115449280 GeneID:4331042| Length = 41...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0802200

Description

Glycoside hydrolase family 79, N-terminal protein

Version

NM_001054955.1 GI:115449280 GeneID:4331042

Length

4164 bp

Definition

Oryza sativa Japonica Group Os02g0802200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35086402..35090565

Sequence Coding Region

35086586..35086831,35087511..35087547,35087818..35088001,35088093..35088241,35088639..35088872
,35088960..35089149,35089231..35089356,35089754..35089853,35089966..35090325

Expression

GEO Profiles:Os02g0802200

Genome Context

<gbrowseImage1> name=NC_008395:35086402..35090565 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35086402..35090565 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggggctactgctgaagctggtcgggttctgcttctgggccgtcttctggctcggcggcgccgccaccgtcagcaccaacgccggcggcgaggcggcggcggcggcggtggtggtggacgcgcggtccgccattgctgtgacggacgaggacttcgtgtgcgcgacgctggattggtggccgccggacaagtgcgactacggcacctgcagctggggactcgccaccctcctcaacatggatctttcaaacaaaatcctgttgaatgccgtcaaagcattctcacctctgaagcttaggctgggaggatccttgcaggatgtgttgatatacgacaccggcgatcctcggcagccgtgcactccgttcacgaagaactcatcggccatgttcggtttcactcaaggttgcctgccgttgcatagatgggacgagctcaatgcattcttccaaaaatcaggagcaaaaattatctttgggctgaatgctctgaatggtagggttccaatgtctgatgattctttaggagggccatggaattacaccaatgcggcttccttcattcgctacactgtcagcaagggctatgacatccatggatgggaactcggaaatgaactcagtggcagtggagttggagctcgagttgatgcagaccaatatgcacaagatgttctagctctgaaacaaatcattgacaactcctaccaaggccatgcatcaaagccactggtgatcgcaccgggaggtttctttgatgcagcctggttcactgagcttatcagcagaacaaagccaaaccagatggatgtgatgactcaccacatctacaatctaggccctggcgtcgacacgcacctgattgataaaattcttgacccgtcttacctcgacggcgaggccggcacattcagcagtctccaggggatactgaagtctgcagggacgtccaccgtcgcgtgggtcggcgaggctggaggcgcttacaacagtggtcaccaccttgtaactgatgcttttgtgttcagcttctggtacttggatcagctaggaatgtcatctaagtatgacacaaagacctactgcagacagaccttgattggagggaactatggtctgctcaacacaacaacgtttgaaccaaaccctgattactacagtgctttactatggaaccgcctcatgggaaccaaggttctctcggcaacattcaacggcaccaacaagatccgcgcttacgcacattgcgcaagagattcacgtgggatcactctactcctgatcaacctcagtggcaacaacacaaaccatatctacgtgacgagcgaaggcgtgcaaccttacagcacaaagaaggagggccgcagaaggttcggacgcatccccgggctcggcgaagaagctcagctcatcagagaagagtaccatctcacccccaaagatgggagcctgcagagccagcatgtgctgctgaatggcaatgtgttggcacctgatgccaatggagagatccctaagctggagcctgtgcaggtggagggaacacagcccataacagtggctccttactccattgtgtttgctcatattcccagattctatgctcctgcctgtaggtag</cdnaseq>

Protein Sequence

<aaseq>MAAGLLLKLVGFCFWAVFWLGGAATVSTNAGGEAAAAAVVVDAR SAIAVTDEDFVCATLDWWPPDKCDYGTCSWGLATLLNMDLSNKILLNAVKAFSPLKLR LGGSLQDVLIYDTGDPRQPCTPFTKNSSAMFGFTQGCLPLHRWDELNAFFQKSGAKII FGLNALNGRVPMSDDSLGGPWNYTNAASFIRYTVSKGYDIHGWELGNELSGSGVGARV DADQYAQDVLALKQIIDNSYQGHASKPLVIAPGGFFDAAWFTELISRTKPNQMDVMTH HIYNLGPGVDTHLIDKILDPSYLDGEAGTFSSLQGILKSAGTSTVAWVGEAGGAYNSG HHLVTDAFVFSFWYLDQLGMSSKYDTKTYCRQTLIGGNYGLLNTTTFEPNPDYYSALL WNRLMGTKVLSATFNGTNKIRAYAHCARDSRGITLLLINLSGNNTNHIYVTSEGVQPY STKKEGRRRFGRIPGLGEEAQLIREEYHLTPKDGSLQSQHVLLNGNVLAPDANGEIPK LEPVQVEGTQPITVAPYSIVFAHIPRFYAPACR</aaseq>

Gene Sequence

<dnaseqindica>185..430#1110..1146#1417..1600#1692..1840#2238..2471#2559..2748#2830..2955#3353..3452#3565..3924#actgcttcctcctgatgcttttcatggtggagatggcaagaagcttccctcttcctcctcctcctcctccccaaaggtgcaatgccctcgcctttgcatcatctttctggttaatttagcttctcccctttctcgtgtccttagatttcttggttcttggtaacgccgcctctgctgccggaaaatggcggcggggctactgctgaagctggtcgggttctgcttctgggccgtcttctggctcggcggcgccgccaccgtcagcaccaacgccggcggcgaggcggcggcggcggcggtggtggtggacgcgcggtccgccattgctgtgacggacgaggacttcgtgtgcgcgacgctggattggtggccgccggacaagtgcgactacggcacctgcagctggggactcgccaccctcctcaacatggtctgtgtttttctttcttttcttttctttttttttcctttcccatttcatgttaagttgtttggaaagtttttcaaatttgagttccagaattgacagtaaatttagtagtttagtatatcatctcgttgcaatgcgattccgtagaacatggacgtggttttcaaggatgtttcttgtgcaaatgcatttctttctctctttttttttatgtagtcggcaacggtttggtttggatctttttgggagctgtgttggataggaatttgacggcctagggagtttcatggacctataattttgtcggtccatttgcatttccatttgcatcacaaccttttcctaccaaatcatgtgcaaatgtaaagcctactaccttaaagaatgtttgggtcaggtttttatgaaaagaggtacacagtggtaggaaaggtagcaacagtagtttattttgttgcgtgcctcttcaactcaactgtgattttttaaaaaaaaaaagaagaagaagaagaagaagaagcaagaactcaactgtgctagcttggaagttgggattctttggttgctaccttgcaaaagtgtacaataattatggtcatgagcacgggtgattatctgattgacacaggtctttaatgattatctgattgacacaggtctttaatgttttcctccgcaggatctttcaaacaaaatcctgttgaatgccgtcaaaggtaagctactacatggtcatcactttcagttgcatgaatgctgtcttactgtccaatcaaaagaagaagaaaattttttaggtccatgtcatgcttcaagaatctttcagaataaaaattaaacatgagacaagcaagctcaagaagttgaccggcaaaacgatttcctgtctttgctgggaatatttcagagccgtccattttcaatctgacaacggtaattcgcagttggtacaatggtcaagtgactgcagctaattcattttgcagcattctcacctctgaagcttaggctgggaggatccttgcaggatgtgttgatatacgacaccggcgatcctcggcagccgtgcactccgttcacgaagaactcatcggccatgttcggtttcactcaaggttgcctgccgttgcatagatgggacgagctcaatgcattcttccaaaaatcagggtacttccagtgtattcagctcgattcagcctcaaaaaagcaatgttttgtttggacttttgattactgattggatactttatggatgcagagcaaaaattatctttgggctgaatgctctgaatggtagggttccaatgtctgatgattctttaggagggccatggaattacaccaatgcggcttccttcattcgctacactgtcagcaagggctatgacatccatggatgggaactcggtatgtttgtttttgtgagctatcttagattaaagaacttctctctcttttgcaatggtattattctcaagctactttaggttaggaaaagaaatctgataggttggcaggaatgagtccagacaagtatgtcgacatcgatttagatagtgttgagctatctattagtataacgatcatagatgatgcttttactggcttttcacgcgtcaatctacaaaagggaatactttcatgtcatgttctttgctttccaaagttttgcttaaagagcaatttatatctgaacaatacttttgtactagcattctaggaactcaaacatacagtccttgtttttttttaaaaaaaaaaaagggaatccttttgtctaaaagaaaacatactgtccttgtaggaaatgaactcagtggcagtggagttggagctcgagttgatgcagaccaatatgcacaagatgttctagctctgaaacaaatcattgacaactcctaccaaggccatgcatcaaagccactggtgatcgcaccgggaggtttctttgatgcagcctggttcactgagcttatcagcagaacaaagccaaaccagatggatgtgatgactcaccacatctacaatctaggccctggtatgatccctgtcactgaccgtgaattcagtacatgagctcaaagcttcgaatctgcctaaatggacaaaattctgaatatttcaggcgtcgacacgcacctgattgataaaattcttgacccgtcttacctcgacggcgaggccggcacattcagcagtctccaggggatactgaagtctgcagggacgtccaccgtcgcgtgggtcggcgaggctggaggcgcttacaacagtggtcaccaccttgtaactgatgcttttgtgttcagcttctggtaaagattttggagcatcattttcttctcaagttatcctctgaagaagccattactgattaggctttaacaatttttcaggtacttggatcagctaggaatgtcatctaagtatgacacaaagacctactgcagacagaccttgattggagggaactatggtctgctcaacacaacaacgtttgaaccaaaccctgattactacaggtaaatacatctgcatgtctattttttttttcttggaaaggttttacctaatgtggaagtacttcattggaacatagttgtcctacgctggatcataaataacaatacttaatcatccatggtgatgaactggcaccataaacttattagaattaatgggggcatatgccctacatgtgcagaatatattccagctattagaatcttttctttccgggaacaaccaattataagaatctgacagcacatacctaatataaccaagctaaagattggttccactgcattcaatcttatagcaaagctaaaaagatcgtttccactgcattcaatcttatagagtgaaacagtgtaccaaggtcaccatcttcatccaacttttctggctctctttcagtgctttactatggaaccgcctcatgggaaccaaggttctctcggcaacattcaacggcaccaacaagatccgcgcttacgcacattgcgcaagagattcagtaagtagtataacatgcaattcaaacaaacaaagaaggagatcccctttatccgtctgcgacgaagtgtatcagctaactgaacactaccaaatttcctctgaattttcagcgtgggatcactctactcctgatcaacctcagtggcaacaacacaaaccatatctacgtgacgagcgaaggcgtgcaaccttacagcacaaagaaggagggccgcagaaggttcggacgcatccccgggctcggcgaagaagctcagctcatcagagaagagtaccatctcacccccaaagatgggagcctgcagagccagcatgtgctgctgaatggcaatgtgttggcacctgatgccaatggagagatccctaagctggagcctgtgcaggtggagggaacacagcccataacagtggctccttactccattgtgtttgctcatattcccagattctatgctcctgcctgtaggtagatattgttgattgttgattggtttttgtgtgaatttgggatgatgtttattatcttcatagatttagagtaattgtgggtgagaggcaaagcatgctcacctgctgcaaaatgaagtaaactgtaaggctgaaagctctgtgatttgccattcttttaggtggaaaaagggttaaggaaatgtatgaacaaaaggatgtgaattgaaaagaagaaataatagtaagttccaatttgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0802200, RefSeq:Os02g0802200