Os02g0813600

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Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0813600| Description = Very-long-chain 3-ketoacyl-CoA synthase family protein| Version = NM_001055021.1 GI:115449520 GeneID:4331113| Length...")
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Gene Name

Os02g0813600

Description

Very-long-chain 3-ketoacyl-CoA synthase family protein

Version

NM_001055021.1 GI:115449520 GeneID:4331113

Length

1708 bp

Definition

Oryza sativa Japonica Group Os02g0813600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35740648..35742355

Sequence Coding Region

35740716..35742107

Expression

GEO Profiles:Os02g0813600

Genome Context

<gbrowseImage1> name=NC_008395:35740648..35742355 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35740648..35742355 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttgctgccgctggtgacgctgctgctgctggcgcacgcggcggcgtgggtggcgtggcaggcggcggcgcggcggcggcgggcgacctgctacctcctcgactacgcgtgccacaagccctccgacgaccgcaaggtcacgacggagctcgccggcgccatcatcgagcgcaacaagcgcctcggcctccccgagtaccgcttcctcctcaaggtcatcgtcaactccggcatcggcgagcacacctactccccccgcaacgtcctcgacgcccgcgaggactgccccaccctgcgcgacgccctcgacgagatggacgacttcttcgacgacgccgtcgccgccgtcctcgccagggccgccgtctcgccgcgcgacgtcgacctgctcgtcatcaacgtcggctccttctcgccctcgccgtcgctcgccgacagggtcgtcaggcggttcgggttgcgggacgacgtcatggcgtacaacctctccgggatggggtgcagcgccgggctcgtctccgtcgacctcgcccgcaacgtcatgctcacgcgcccgcgcaccatggcactcgtcctcacctccgagtcgtgcgcccccaactggtacacggggaccgacaagtccatgatgctgggcaactgcctcttccggtgcggcggcgccgccgcgctgctcaccaacgacccggcgttccggtcgcgcgccaagatggagctccgctgcctcgtgcgcgcgcacatcggcgcccacgacgacgcccacgccgccgccgtgcaccgcgaggacgccgacggccgcctcggggtcagcctcagcaaggcgctcccgaaggccgccgtgcgcgccttcaccgagaacctccagcgcctggcgccgcgcatcctccccgccggcgagctcgcccgcttcgccgcccgcctcctcctccgcaagcttctccgccgcaaggccgccgccggcgccgccgccaagatcaacttcaagaccggcgtcgaccacttctgtctccaccccggcgggacggcggtgatcgaggcggtgaggaagagcctcgggctggacagctacgacgtggagccggcgaggatggcgttgcaccggtgggggaacacgtcggcgagcagcctctggtacgtgctgtcctacatggaggcgaagcggcggctcaacgccggcgaccgggtgctcatggtgaccttcgggtcggggttcaagtgcaacagcagctactgggtggtgaccaaggacctcgccgacgccggcgcctgggaagattgcatccacgactacccgccggcgaacttggtcaacccttacatggagaagttcggctgggtcaacgaccttcccagccagggtcagggaggcgcatttcccttcttttaa</cdnaseq>

Protein Sequence

<aaseq>MDLLPLVTLLLLAHAAAWVAWQAAARRRRATCYLLDYACHKPSD DRKVTTELAGAIIERNKRLGLPEYRFLLKVIVNSGIGEHTYSPRNVLDAREDCPTLRD ALDEMDDFFDDAVAAVLARAAVSPRDVDLLVINVGSFSPSPSLADRVVRRFGLRDDVM AYNLSGMGCSAGLVSVDLARNVMLTRPRTMALVLTSESCAPNWYTGTDKSMMLGNCLF RCGGAAALLTNDPAFRSRAKMELRCLVRAHIGAHDDAHAAAVHREDADGRLGVSLSKA LPKAAVRAFTENLQRLAPRILPAGELARFAARLLLRKLLRRKAAAGAAAKINFKTGVD HFCLHPGGTAVIEAVRKSLGLDSYDVEPARMALHRWGNTSASSLWYVLSYMEAKRRLN AGDRVLMVTFGSGFKCNSSYWVVTKDLADAGAWEDCIHDYPPANLVNPYMEKFGWVND LPSQGQGGAFPFF</aaseq>

Gene Sequence

<dnaseqindica>69..1460#accacgatccaacgcattttcttccacaattgcacgtacgtggagtatcacggtatcagtagtacgtaatggatttgctgccgctggtgacgctgctgctgctggcgcacgcggcggcgtgggtggcgtggcaggcggcggcgcggcggcggcgggcgacctgctacctcctcgactacgcgtgccacaagccctccgacgaccgcaaggtcacgacggagctcgccggcgccatcatcgagcgcaacaagcgcctcggcctccccgagtaccgcttcctcctcaaggtcatcgtcaactccggcatcggcgagcacacctactccccccgcaacgtcctcgacgcccgcgaggactgccccaccctgcgcgacgccctcgacgagatggacgacttcttcgacgacgccgtcgccgccgtcctcgccagggccgccgtctcgccgcgcgacgtcgacctgctcgtcatcaacgtcggctccttctcgccctcgccgtcgctcgccgacagggtcgtcaggcggttcgggttgcgggacgacgtcatggcgtacaacctctccgggatggggtgcagcgccgggctcgtctccgtcgacctcgcccgcaacgtcatgctcacgcgcccgcgcaccatggcactcgtcctcacctccgagtcgtgcgcccccaactggtacacggggaccgacaagtccatgatgctgggcaactgcctcttccggtgcggcggcgccgccgcgctgctcaccaacgacccggcgttccggtcgcgcgccaagatggagctccgctgcctcgtgcgcgcgcacatcggcgcccacgacgacgcccacgccgccgccgtgcaccgcgaggacgccgacggccgcctcggggtcagcctcagcaaggcgctcccgaaggccgccgtgcgcgccttcaccgagaacctccagcgcctggcgccgcgcatcctccccgccggcgagctcgcccgcttcgccgcccgcctcctcctccgcaagcttctccgccgcaaggccgccgccggcgccgccgccaagatcaacttcaagaccggcgtcgaccacttctgtctccaccccggcgggacggcggtgatcgaggcggtgaggaagagcctcgggctggacagctacgacgtggagccggcgaggatggcgttgcaccggtgggggaacacgtcggcgagcagcctctggtacgtgctgtcctacatggaggcgaagcggcggctcaacgccggcgaccgggtgctcatggtgaccttcgggtcggggttcaagtgcaacagcagctactgggtggtgaccaaggacctcgccgacgccggcgcctgggaagattgcatccacgactacccgccggcgaacttggtcaacccttacatggagaagttcggctgggtcaacgaccttcccagccagggtcagggaggcgcatttcccttcttttaattaattattactattactggtagtactgattaatttatactcaatttattattactaccatgaatccgtataatacatatagcagttctgactgtggtttcttagttaattaagccgtcaaaattaagaaactacagtcagaattgactcaactgttaaaacttgaaaacaatcgtcacacaggctgtgtgtaagggactgtatgtacggtgtttatacggtatttttttgtggttttatgtgttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0813600, RefSeq:Os02g0813600