Os02g0815500

From RiceWiki
Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0815500| Description = Alcohol dehydrogenase class III (EC 1.1.1.1) (Glutathione-dependent formaldehyde dehydrogenase) (EC 1.2.1.1) (FDH) (FA...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0815500

Description

Alcohol dehydrogenase class III (EC 1.1.1.1) (Glutathione-dependent formaldehyde dehydrogenase) (EC 1.2.1.1) (FDH) (FALDH) (GSH-FDH)

Version

NM_001055038.1 GI:115449588 GeneID:4331130

Length

3700 bp

Definition

Oryza sativa Japonica Group Os02g0815500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35817184..35820883

Sequence Coding Region

35817267..35817306,35817454..35817590,35818222..35818268,35818358..35818683,35819008..35819090
,35819169..35819244,35819867..35820024,35820347..35820508,35820603..35820719

Expression

GEO Profiles:Os02g0815500

Genome Context

<gbrowseImage1> name=NC_008395:35817184..35820883 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35817184..35820883 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcctcgacccagggccaggtcatcacctgcaaagcggcggtggcatgggaggccaacaggccgatgacgatcgaggacgtgcaggtggcgccgccgcaggccggcgaggtccgtgtcaagatcctcttcaccgcgctctgccacaccgaccactacacctggagcggcaaggatcctgagggtctatttccttgcattcttggtcatgaagctgctggaattgttgaaagtgttggggaaggagtaactgaggtgcagcctggggaccatgtcattccttgttaccaagcagaatgcagagaatgcaagttttgcaagagtggaaagaccaacctctgtggcaaagttcgtgctgccacaggggtcggtgtcatgatgaatgatcgcaagagccgtttctcaataaatggaaaacccatttatcatttcatgggaacatctacattcagccagtatactgttgtgcacgatgtcagtgtcgcaaagataaacccacaggcacctctagacaaagtttgcctgcttggctgcggtgtttctactggcctcggagcagtatggaataccgcaaaggttgaagcaggttccatcgttgctatttttggacttggcacagttggacttgcagttgctgagggggcaaaatcagctggtgcttctcggattattggcatcgacattgatagcaaaaagtttgatgtcgcaaagaactttggggttacagaatttgtgaacccaaaggaccatgacaaaccaatccaacaggtcatagttgaccttacagacggtggtgtggactacagctttgaatgcattggaaatgtttctgttatgaggtctgcattggagtgctgccacaagggctggggaacctctgtcatcgttggtgtagctgcttctgggcaagaaatctctacacgaccattccagctcgtcactggccgtgtctggaagggaacagctttcggcggtttcaagagccgaagccaagttccatggctcgttgagaagtacttgaacaaggaaatcaaggtggacgagtacgttactcacagcatgaacctgactgacatcaacaaggcgtttgacctgctgcatgaaggtggctgcctgcggtgtgttctggcaactgataaatga</cdnaseq>

Protein Sequence

<aaseq>MASSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKIL FTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR ECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV SVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKS AGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGN VSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVP WLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATDK</aaseq>

Gene Sequence

<dnaseqindica>84..123#271..407#1039..1085#1175..1500#1825..1907#1986..2061#2684..2841#3164..3325#3420..3536#gcaatcacatcctcttcccttctcttctccatcgcatctaccaccgagcgtgcaaggaggggggggggggggggggggtgaaaatggcttcctcgacccagggccaggtcatcacctgcaaaggtaacctcttggttcccctctcttagtatcgtggattcgtggtggtagatttgctagtgtgctagagttggatgtatggttgctgtttcttggagtgttcttggtttgatctggagtgggggatccccggtgtggtggtgggtgcagcggcggtggcatgggaggccaacaggccgatgacgatcgaggacgtgcaggtggcgccgccgcaggccggcgaggtccgtgtcaagatcctcttcaccgcgctctgccacaccgaccactacacctggagcggcaaggtttctctctctctgtcccaccgactcttactcgccgtgtttcttcgaaatctagatttctcgaactcgccatttacactggtagtagggtagtatactctttccaaccacgtatctggtgatggtagttggtgaccgcactggatggaacccgattcatttttttgtttaattagtggattagtatttaattgtcaagtaacatcgttatgttattgtttcaaggatttaggtgtttcttcagattattatgaatgggaagattaaacaattttgtactagaggactctgggtttcttctaggcttctagctagcgttgcatgagttcgtcctatatttttattttccttgactgcaaaatgggtgtagattgatggcaatcatctgtaggaaatcaaaattactggcagaaacctggaagtgttgagtatttctacagtggtctctactggcaagcagtagaccatcagtattctcgtcagtagtagcatctaaaccgttgacttgagttctactagtataatacaatattctaccgccagtagattactgtaccttgtggcaaatgttggcaacattattatataccaaccaaacaggcccttatcaagtgatttacgtgccatgcaggatcctgagggtctatttccttgcattcttggtcatgaagctgctgggtaagcatatagatgtgctaattacatatatgatcatgcacagctaagataattgagcatcgatatgtttcttctgtttatgtttatagaattgttgaaagtgttggggaaggagtaactgaggtgcagcctggggaccatgtcattccttgttaccaagcagaatgcagagaatgcaagttttgcaagagtggaaagaccaacctctgtggcaaagttcgtgctgccacaggggtcggtgtcatgatgaatgatcgcaagagccgtttctcaataaatggaaaacccatttatcatttcatgggaacatctacattcagccagtatactgttgtgcacgatgtcagtgtcgcaaagataaacccacaggcacctctagacaaagtttgcctgcttggctgcggtgtttctactggtaggttcttcattggaggccaaacttttattcaccaattatagttccttttgtacctactatcattttgtagctttacaaaccttacatgcagagctcgttgggttgtttgaatgcattgtgcttgattttttttaccatatttcataaatatggaaagcctcactatatctgtgtcaatgatacctccaaatttccaattattacttttcttttggtacactggatacaatattacataccattgcctcgcacattcttgttattctcttctagataattatgatatattcgtatgtgtatctcacaaattactattgttaggcctcggagcagtatggaataccgcaaaggttgaagcaggttccatcgttgctatttttggacttggcacagttggacttgcagtaagtcaaaatatgtccatgcacatttaacatgttagtctggaaagagagctttgacatctaagattttcattttaggttgctgagggggcaaaatcagctggtgcttctcggattattggcatcgacattgatagcaaaaagtttgatgtcggtatgtttcataatttccatttttctgtttattgcaccttttggttggtagagtaaagggcatattccactctcttaagtatatctggtgaaagcaggcaatccatgtctggtggtgcaacttgctaatagacctttctctcttgaatcgaacctgaaagtgcaaatctacgtattgtttgattatcaacaaatactagaataaattccaaaggcttactatccctttatagtaattcgtttttgacttgcaaaggcagtgatgcaccatcaacaattcctgaatttgccaccattgtatttgtctgagttgtgataggaaagattttgatctgtgatccattgttaacttgttattaccatttatcctcttttgcttgcatgcaccttgctcttattaatcatcacattgcttttcggcatcaggtccagagatcaaacttattattatttgtttatttccgcccatatgcaccacaaatgtgttcttacaaattggatgctttgtatgtgttattgaatgataaagaatgtattacattgcatgagttatttcataaaaattgtctgcaaatcaaacatagcttattttccaactctttttctgctgttattgtttgcagcaaagaactttggggttacagaatttgtgaacccaaaggaccatgacaaaccaatccaacaggtcatagttgaccttacagacggtggtgtggactacagctttgaatgcattggaaatgtttctgttatgaggtctgcattggagtgctgccacaaggtaagctacggctgcagcttttattcggacatctttgtgaattttgtcgcctggtacaaattaatgacaaacttcaaaagaattaataaattgagttgaatcatttggtgcggtaatgtctatttctaaatgaattaatgacatttgatctgaatcatatcttaactgtgttgcattgtcatttggataaactgcttttatttgaaatacagcgtatctgtttttatatttccatttatagatcaatcatactgttttccacccatcacaaagtaaaatattttcgctttcaactgttaaatttctgtgggtattactgtagggctggggaacctctgtcatcgttggtgtagctgcttctgggcaagaaatctctacacgaccattccagctcgtcactggccgtgtctggaagggaacagctttcggcggtttcaagagccgaagccaagttccatggctcgttgagaagtacttgaacaaggtaacaaatcatcactgtctaaactctaaacctgcagaagtttcgtcaatctgtagtgattcatctgaccagaattctcatgtaatccgcacaggaaatcaaggtggacgagtacgttactcacagcatgaacctgactgacatcaacaaggcgtttgacctgctgcatgaaggtggctgcctgcggtgtgttctggcaactgataaatgaaccgatgatggttcatctgcttttggctgtgcttctgagctatgtcacgccaaattgtaatccagatctaccagccttggaaattgaattattctgctcgtttcgcttagaagcactttgaactgtgacaccactctgctataataatatatgtgctgtttgga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0815500, RefSeq:Os02g0815500