Os02g0816000

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Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0816000| Description = C2 domain containing protein| Version = NM_001055043.2 GI:297600118 GeneID:4331135| Length = 3596 bp| Definition = ...")
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Gene Name

Os02g0816000

Description

C2 domain containing protein

Version

NM_001055043.2 GI:297600118 GeneID:4331135

Length

3596 bp

Definition

Oryza sativa Japonica Group Os02g0816000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35844873..35848468

Sequence Coding Region

35845182..35848181

Expression

GEO Profiles:Os02g0816000

Genome Context

<gbrowseImage1> name=NC_008395:35844873..35848468 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35844873..35848468 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaaggcggcggagaagctggtggtggaggtggtggcggcgcacaacctcatgcccaaggacgggcaggggtcctcgtcggcgtacgtggaggtggagttcgagcaccagaggcggcggacgcgtgccaggcccaaggagctcaaccccgtctggaacgagcgcctcgtcttcgccgtcgccgaccccgacgatctcccctaccgcgccatcgacgtcggcgtctacaacgaccgcgccgcgtccgggggggtcgccggcggcggcggggcggcgccgcacggccgcaacttcctcggcaaggtccgcgtcccggccgccggcgtgccggcccccggggaggaggtggtgccgcagctcttcacgcttgagaagcgcagcctgttctcccacatccgcggcgagatcaccttgaagatttatcgcaccaactccggggaggttgtcgtcaagtccaagccggagaagccggtgaaggcggtggtgtcgggcccggaggtggtggccgcgccgccggtcaccgggcccaagaagcagcagcagcagcagccggtggtggccgtgcagccgccgcctccgcagccggaggcgcccatggacatcctgccgcccccggccccggtgctcatgaagccggtaatgctcgccgacccctaccccgcctcggccgtgttctccggccccggcgacttctctctcaaggagacgcggccccgcctcggcggcggcacgacggccgacaaggcgagcgcgacctacgacctggtcgagcagatgcagtacctgtacgtgcgcgtggtgcgcgcgcgcggcgtggcggcggtgggcgagaccgtcgcggaggtgaagctgggcaactaccgcggcgtgacgcccgccaccgccgcgcaccactgggaccaggtgttcgccttctccaaggagaccatccagtcctcgttcgtcgaggtgttcgtgcgcgcgcgcggcagcgacgaccacgtcggccgcgtctggttcgacctctccgaggtgccgcgccgagctccaccggacagcacgctcgcgccgcagtggcacatcatggaggaccgcaagggcgagcgcggcgccgcggaggtgatgatcgccgtctggttcggcacccaggccgacgaggccttcgccgaggcctggcattctaaggcggccggcgtccatggctacggaccattgggctccatcaagtccaaggtgtacgttgcccccaagctgtggtaccttcgtgtgtccgtcattgaggcgcaggacttgatccctatggacaagggaccaatggcgattggccggtatccggagctctttgtgcgtgcgcaggttgggagtcaaatgctgcgcacacggcctgcgccagtggcggcgaatcgaggaccatcaagcccgttctggaatgaagacctgatgtttgtggttgctgagccatttgaggagttcttggtgttgtctctggaggatcatgtgtcaccaggaagggatgatgtgcttggccgtcttgttgttccagtatcctccattgagaggcgctgggatgagaagcttgttgtctccaggtggtttgggctggatcgtggcactggtggtggcaatgttgcaagtggcaatacaaataggtttgggagccgtgtgcatctccgcttaagtcttgatgggggataccatgttctggatgaggctactgcttacagcagcgatctccggcctactggaaagcagctgtggcagccacatgttggggtgcttgagctcggtgtgcttggtgcgactggattgataccgatgaaggcccgtgatggcagaggtgcaacctcggatgcatactgtgttgcaaagtatggccagaagtggatccgcactcgtactgtcgtcgactctgtatgccctcggtggaatgagcagtacacatgggaggtgtttgacccttgcactgtcatcacggttggtgtgtttgacaattgccatgttgacaagccagcttctgggaataccacattggctgtccgtgataattgcattggcaaagtacgtatccggctttcaacattggagactgatagggtgtatacacatgcctacccacttctcatgctgcatccatcaggggtcaagaagatgggagagcttcacttagctgtgcgcttctgctgtggcaatgctggcaacatgttccatgcctatgtgcgtccgctgcttccaaagatgcactatattgagccactgcttgtgcgccaggttgagagcctccgctttcaggctaccaatgttgtagcagctcgccttggccgtgctgagccaccacttggcagagaggttgttgagtacatgctagaccaccgttcacatctatggagtatgagacgcagcaaagcaaactttttccgccttgtcactgtactctctggaccgatcactattggcagatggtttgaacttgtccgctcttggaatcgcccggtgcattcatgccttgctgtattcacattcctggtgtttgtcacaatgccggagctgattcttccgacggcattcttggcaatggcattcactgggttatggaggtaccgtgtccgctcaaggcacccgccccacatggagatgaggttgtctcatgcagacgcagccactgtggatgagctagatgaggagtttgacacattcccttcgagcaggggagatgttgtgcgcttcaggtatgaccgccttcgcagcgttgctgggagggtgcagacagtggttggcgacatagcaacacagggtgagcgaatgcaggcccttctcagctggcgtgacccgagggcaacagtgcttttctcgatcgcctgtgtccttgctgcggtcattgcatataccattccgatgaaggtgctggttgggctctggggcctgtatgctatgcgtccgccaagattccgcagcaggatgccatctccgctgatgaacttcttcaggaggctgccatccaaggctgacagccttctctga</cdnaseq>

Protein Sequence

<aaseq>MAKAAEKLVVEVVAAHNLMPKDGQGSSSAYVEVEFEHQRRRTRA RPKELNPVWNERLVFAVADPDDLPYRAIDVGVYNDRAASGGVAGGGGAAPHGRNFLGK VRVPAAGVPAPGEEVVPQLFTLEKRSLFSHIRGEITLKIYRTNSGEVVVKSKPEKPVK AVVSGPEVVAAPPVTGPKKQQQQQPVVAVQPPPPQPEAPMDILPPPAPVLMKPVMLAD PYPASAVFSGPGDFSLKETRPRLGGGTTADKASATYDLVEQMQYLYVRVVRARGVAAV GETVAEVKLGNYRGVTPATAAHHWDQVFAFSKETIQSSFVEVFVRARGSDDHVGRVWF DLSEVPRRAPPDSTLAPQWHIMEDRKGERGAAEVMIAVWFGTQADEAFAEAWHSKAAG VHGYGPLGSIKSKVYVAPKLWYLRVSVIEAQDLIPMDKGPMAIGRYPELFVRAQVGSQ MLRTRPAPVAANRGPSSPFWNEDLMFVVAEPFEEFLVLSLEDHVSPGRDDVLGRLVVP VSSIERRWDEKLVVSRWFGLDRGTGGGNVASGNTNRFGSRVHLRLSLDGGYHVLDEAT AYSSDLRPTGKQLWQPHVGVLELGVLGATGLIPMKARDGRGATSDAYCVAKYGQKWIR TRTVVDSVCPRWNEQYTWEVFDPCTVITVGVFDNCHVDKPASGNTTLAVRDNCIGKVR IRLSTLETDRVYTHAYPLLMLHPSGVKKMGELHLAVRFCCGNAGNMFHAYVRPLLPKM HYIEPLLVRQVESLRFQATNVVAARLGRAEPPLGREVVEYMLDHRSHLWSMRRSKANF FRLVTVLSGPITIGRWFELVRSWNRPVHSCLAVFTFLVFVTMPELILPTAFLAMAFTG LWRYRVRSRHPPHMEMRLSHADAATVDELDEEFDTFPSSRGDVVRFRYDRLRSVAGRV QTVVGDIATQGERMQALLSWRDPRATVLFSIACVLAAVIAYTIPMKVLVGLWGLYAMR PPRFRSRMPSPLMNFFRRLPSKADSLL</aaseq>

Gene Sequence

<dnaseqindica>310..3309#ggaagagagctgtcagtccaagcctccaaagccaaaaccaacgcgaagcgaagcagcagagcgccaccgccatttccaccaccgcgtctgagagcttgagcgctgctgcgcctgcgagcagggagcccacctctcctcctccctgacctcacctcccatcgattgcgatgatggagattcctccacgcgcgcctgcctagctcttcgtctccccataaacccttttcccaaaacccctcaagccaccatcctctgtttgaaatcttgagcaagtttttttgtgaatctttgggaggaaaatcgattgggatggcgaaggcggcggagaagctggtggtggaggtggtggcggcgcacaacctcatgcccaaggacgggcaggggtcctcgtcggcgtacgtggaggtggagttcgagcaccagaggcggcggacgcgtgccaggcccaaggagctcaaccccgtctggaacgagcgcctcgtcttcgccgtcgccgaccccgacgatctcccctaccgcgccatcgacgtcggcgtctacaacgaccgcgccgcgtccgggggggtcgccggcggcggcggggcggcgccgcacggccgcaacttcctcggcaaggtccgcgtcccggccgccggcgtgccggcccccggggaggaggtggtgccgcagctcttcacgcttgagaagcgcagcctgttctcccacatccgcggcgagatcaccttgaagatttatcgcaccaactccggggaggttgtcgtcaagtccaagccggagaagccggtgaaggcggtggtgtcgggcccggaggtggtggccgcgccgccggtcaccgggcccaagaagcagcagcagcagcagccggtggtggccgtgcagccgccgcctccgcagccggaggcgcccatggacatcctgccgcccccggccccggtgctcatgaagccggtaatgctcgccgacccctaccccgcctcggccgtgttctccggccccggcgacttctctctcaaggagacgcggccccgcctcggcggcggcacgacggccgacaaggcgagcgcgacctacgacctggtcgagcagatgcagtacctgtacgtgcgcgtggtgcgcgcgcgcggcgtggcggcggtgggcgagaccgtcgcggaggtgaagctgggcaactaccgcggcgtgacgcccgccaccgccgcgcaccactgggaccaggtgttcgccttctccaaggagaccatccagtcctcgttcgtcgaggtgttcgtgcgcgcgcgcggcagcgacgaccacgtcggccgcgtctggttcgacctctccgaggtgccgcgccgagctccaccggacagcacgctcgcgccgcagtggcacatcatggaggaccgcaagggcgagcgcggcgccgcggaggtgatgatcgccgtctggttcggcacccaggccgacgaggccttcgccgaggcctggcattctaaggcggccggcgtccatggctacggaccattgggctccatcaagtccaaggtgtacgttgcccccaagctgtggtaccttcgtgtgtccgtcattgaggcgcaggacttgatccctatggacaagggaccaatggcgattggccggtatccggagctctttgtgcgtgcgcaggttgggagtcaaatgctgcgcacacggcctgcgccagtggcggcgaatcgaggaccatcaagcccgttctggaatgaagacctgatgtttgtggttgctgagccatttgaggagttcttggtgttgtctctggaggatcatgtgtcaccaggaagggatgatgtgcttggccgtcttgttgttccagtatcctccattgagaggcgctgggatgagaagcttgttgtctccaggtggtttgggctggatcgtggcactggtggtggcaatgttgcaagtggcaatacaaataggtttgggagccgtgtgcatctccgcttaagtcttgatgggggataccatgttctggatgaggctactgcttacagcagcgatctccggcctactggaaagcagctgtggcagccacatgttggggtgcttgagctcggtgtgcttggtgcgactggattgataccgatgaaggcccgtgatggcagaggtgcaacctcggatgcatactgtgttgcaaagtatggccagaagtggatccgcactcgtactgtcgtcgactctgtatgccctcggtggaatgagcagtacacatgggaggtgtttgacccttgcactgtcatcacggttggtgtgtttgacaattgccatgttgacaagccagcttctgggaataccacattggctgtccgtgataattgcattggcaaagtacgtatccggctttcaacattggagactgatagggtgtatacacatgcctacccacttctcatgctgcatccatcaggggtcaagaagatgggagagcttcacttagctgtgcgcttctgctgtggcaatgctggcaacatgttccatgcctatgtgcgtccgctgcttccaaagatgcactatattgagccactgcttgtgcgccaggttgagagcctccgctttcaggctaccaatgttgtagcagctcgccttggccgtgctgagccaccacttggcagagaggttgttgagtacatgctagaccaccgttcacatctatggagtatgagacgcagcaaagcaaactttttccgccttgtcactgtactctctggaccgatcactattggcagatggtttgaacttgtccgctcttggaatcgcccggtgcattcatgccttgctgtattcacattcctggtgtttgtcacaatgccggagctgattcttccgacggcattcttggcaatggcattcactgggttatggaggtaccgtgtccgctcaaggcacccgccccacatggagatgaggttgtctcatgcagacgcagccactgtggatgagctagatgaggagtttgacacattcccttcgagcaggggagatgttgtgcgcttcaggtatgaccgccttcgcagcgttgctgggagggtgcagacagtggttggcgacatagcaacacagggtgagcgaatgcaggcccttctcagctggcgtgacccgagggcaacagtgcttttctcgatcgcctgtgtccttgctgcggtcattgcatataccattccgatgaaggtgctggttgggctctggggcctgtatgctatgcgtccgccaagattccgcagcaggatgccatctccgctgatgaacttcttcaggaggctgccatccaaggctgacagccttctctgatcctcattgttgtgcagctgtagctaaccttgtggtctgataggtgattttggcccgaaggagatgcttcaaaggaatctaggaagaaacaaacttgcagtaggttcaggttgcttgcttgcttagtttaatgcttttaggtaatgtatgcttctctatgatgcaacttatagcagttgcagacttgttcttgtgcctttcagttccagttgtgcgaaaaggctagttgtgatggtaatgtgtaatgtggtgatgatgaattaatcaagttgatatttgaacttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0816000, RefSeq:Os02g0816000