Os02g0816100

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Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0816100| Description = HAD-superfamily hydrolase, subfamily IA, variant 2 protein| Version = NM_001055044.1 GI:115449612 GeneID:4331136| Le...")
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Gene Name

Os02g0816100

Description

HAD-superfamily hydrolase, subfamily IA, variant 2 protein

Version

NM_001055044.1 GI:115449612 GeneID:4331136

Length

2947 bp

Definition

Oryza sativa Japonica Group Os02g0816100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35850517..35853463

Sequence Coding Region

35850874..35851059,35851324..35851458,35851786..35851846,35852883..35852925,35853042..35853393

Expression

GEO Profiles:Os02g0816100

Genome Context

<gbrowseImage1> name=NC_008395:35850517..35853463 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35850517..35853463 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcccccgcttgctcctcgcccaccgcctcctcgccggcgccgccgctcctctcccccgccgccggacggccgccgccatgtccgccgcggcgccggggacgcggctgctgcgcggcgtggtgttcgacatggacgggaccctgacggtgcccgtcatcgacttcccggccatgtaccgcgaggtgctcggcggggacgaggcctacgcggcggcgcgcgcggcgggcgggggctccgtcgacatactccactgcatcgagggctgggcgcccgacgagcagcgccgcgcctacgaggtcatcgcgcggttcgagcaggatggcctcgaccgcctccagatcatgcccggtgcctctgagctctgcgggttcctggacgcaaagcagatcagaagaggtttaatcacccgcaatgtgaagaccgcagttgatttgtttcaccaaaggtttggtatgatgttttctccagccttaagtagagaattccgcccctataagccagatccagctcccctgcttcatatttgctccacttggaatattccaccaaatgaggtggtcatggttggtgatagcctcaaggatgatgtcgtctgtggtaagagagcaggagcttttacttgcttgcttgacgaaacaggacgatacggtccccatgattctttgcctgaaggtgttcgacctgacttcaaggtttcttcgctttccgaagtattctctgtgctggaagagcattttgatttggcaccggtggtttcagagagtagaatctga</cdnaseq>

Protein Sequence

<aaseq>MFPRLLLAHRLLAGAAAPLPRRRTAAAMSAAAPGTRLLRGVVFD MDGTLTVPVIDFPAMYREVLGGDEAYAAARAAGGGSVDILHCIEGWAPDEQRRAYEVI ARFEQDGLDRLQIMPGASELCGFLDAKQIRRGLITRNVKTAVDLFHQRFGMMFSPALS REFRPYKPDPAPLLHICSTWNIPPNEVVMVGDSLKDDVVCGKRAGAFTCLLDETGRYG PHDSLPEGVRPDFKVSSLSEVFSVLEEHFDLAPVVSESRI</aaseq>

Gene Sequence

<dnaseqindica>2405..2590#2006..2140#1618..1678#539..581#71..422#accaccaccacacacacgggccacacacaccgcggaggaatccaatccagcggctgagatcgcgccacgtatgttcccccgcttgctcctcgcccaccgcctcctcgccggcgccgccgctcctctcccccgccgccggacggccgccgccatgtccgccgcggcgccggggacgcggctgctgcgcggcgtggtgttcgacatggacgggaccctgacggtgcccgtcatcgacttcccggccatgtaccgcgaggtgctcggcggggacgaggcctacgcggcggcgcgcgcggcgggcgggggctccgtcgacatactccactgcatcgagggctgggcgcccgacgagcagcgccgcgcctacgaggtcatcgcgcggttcgagcaggatggcctcgaccgcctccagatcatgcccggtaagcctcttggcatgcgttcgatggcgatttctaatgccaaggctgtgcagtgctatcttggtttctcaacctactgaggactactgaggtcgcaatttgggtggatgttgcaggtgcctctgagctctgcgggttcctggacgcaaagcagatcaggtgagcgttcttggcttattgggccccgtctggtagagccaccggttctgatactttggttcagaaatgtagctcaatgtgcttctttatcttcgtcaagatgcttagttcaaatgaattgatcttgcttagtaagaatgattttttgcaagaagctagttctggataaactacaaactgtacaattgctgatgcacttgcctgtatcatctggtagtcggtagagctcccagtttttattcccagttcttattcctaaatggctaaatgtatctatgcactatacactccatccagtttgagctgaattaatcttgcttcttaagattgattttgtgcaagaaaccaattctggagaccggacaaactatacaaattgtacatttgctgctgcacctggtagataagttgtttgaattaaagcggtgcttcctgaaatttgaacagatgataaatatgcaagctatatgtcagaataattgacaaatagttatggagctattggtcattggttgactgcagtgtaggtgggaaactgtatggctgtaaagttcaatatactactgccctctgtttttttgctgtttaattgatacacagtttatctctgttcatcatcttccttttctcttgcaataaaggaattttcttgttctcacaatgctgagctcatgtgctctatcaacctcaaatatgcatacatcgcaatttaatgacttctaggatcaataaatatcaatacaccatgtatcaaaatgttgtgttttgatttgtgactaggttttaactagatcataaatcatgtggctatttttgttgtgcctctattcttggattgatctgaaacagcctccttgtagtgcctatgcatgcttgtttagtatgcgctgttatcatcctgtaaaacagcggaattatttatgcaccacacataaataacaacaataattaactgtattctctgttattacctcattatattagcaacccttatgatatcagtgcggcactgagacctaccctctatatttttcagaagaggtttaatcacccgcaatgtgaagaccgcagttgatttgtttcaccaaaggtttggtgtaagttgctgcacttgtattattctgatcttctattgttcatgcatgtctgatagtttccactgctctgacctattgaatattgtttatacttgggtacacattacggaatgcatgtttttttattggatatgtttgtcaagccttccctgtgttttgctgaattcaagagattatataatgttctgagttgaattttctggataactgtcttctaatgttctcatacactcaatcgacctggttcattgctagctatcagccaaaggttgcagttatgcatttatcttcaatatgctaactatggacatctgaactcttctgcagatgatgttttctccagccttaagtagagaattccgcccctataagccagatccagctcccctgcttcatatttgctccacttggaatattccaccaaatgaggtggtcatggttggtgatagcctcaaggatgatgtaagaattctttataaattgtttctaaatagtttgctttgtcccatggttttaatttcagtctgcagttgagctaaattgttctagtgttgtttttttatatgccccttaactgtaatacttgcataagctaagttactagggtattggacaatgcccttttagctcacaattcacagttttctgaactcagaaagatgcttcagtagcttatggacgctaatatgttgtttctgaaatagttttcactgaaaacatgtgcaggtcgtctgtggtaagagagcaggagcttttacttgcttgcttgacgaaacaggacgatacggtccccatgattctttgcctgaaggtgttcgacctgacttcaaggtttcttcgctttccgaagtattctctgtgctggaagagcattttgatttggcaccggtggtttcagagagtagaatctgacaggaaagtattagttatctgtgatctaacatggaacccagctcctgtgtcttaatactatgaacctccatcagtggtgtttcaagtaccagaaacccttacggcctatgaagattatgctctccaccaaagtggattgcagtttgattttgccacttgccctcaaaatgattcatcgttcattgtcagccggtttgatgtatatcactatgtcctgtccactatacctgttagtattctgtggcacggacagtgcgttctgttatagacaaaaatcaaccctcgcgatgactggcagaatttgccgtagtatttgggtgattcagaatcttttatctgtggccatctttcatattc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0816100, RefSeq:Os02g0816100