Os02g0816400

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Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0816400| Description = Conserved hypothetical protein| Version = NM_001055047.1 GI:115449624 GeneID:4331139| Length = 5212 bp| Definition ...")
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Gene Name

Os02g0816400

Description

Conserved hypothetical protein

Version

NM_001055047.1 GI:115449624 GeneID:4331139

Length

5212 bp

Definition

Oryza sativa Japonica Group Os02g0816400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35878111..35883322

Sequence Coding Region

35879939..35880092,35880186..35880265,35880376..35882148,35882283..35882436,35882526..35883169

Expression

GEO Profiles:Os02g0816400

Genome Context

<gbrowseImage1> name=NC_008395:35878111..35883322 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35878111..35883322 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaggggttcaagataggaagcagaagaagaagcaggacctgcaggttctcgggcccttccctggatgcttgggtaggatgataaacatgtttgacctcagcaatggcgtggtcgcgaccaagatgctcacagagaaagcgcatagagatgtttctccagcaggtaaagaccgtggtaatgctttcaagatggcaattggtccattctcatcacagatagaagataaaaagagagatagtcagcctagaaagcagtccccaactaaaagattgagctcaccaactaaaagatctggtgaggctcctgttaaattgctcatggagcaggacatgtggaaagaagggatgtctggcgaggagccactgaatgttgttgccagattgatgggtctaaatgatgctgccggccaccaatctgatctgaaatcgggaaaaagatcagacaaggaatatcgatctggtggttttgatgagaacagtcggaatctcagaccaaagaaggacagcaaaggccacccaaaccaaaaggcaggaacacacagtgaaccatgcagtggtttcagtgatcaaactttaagaatgaatagcagcaggaataaacaccaagggaaggagccttcttgtgagaagagaatgacccttgtgcgtgaaaaatttgctgaagcaaaacgtctggctacagatgagaagcttctccacacaaaggagttccaagaagcattgcagtttttaagctcaaataaagatctgttcttgaaattccttgatgagccaaatccactgttatcacacaacaattatgagttccaacctgataccccaccttcggagacaaagcaaataaccatactgaagccatcagactcaatcaagagaaatggcaacactcttgtagggaggcagctctattcagacggagatgaaagtgaagggaacaggtgcaggcgtcatcagagtttaagtgtttccccaacaaattcaacattgtctgaaccaacaagaattgtagtactaaagccaggacttgtaaagtcccaggaacccaagattctgaggtccccttcatcatcatcaactgcagctgatagtgaagatgatagtatgtcggcagttgatgagacagtgccaagctcaagaagactggccaaagagatcacttggcagatgaggatgcgtttgaaagacaagcaggatgaagaaaacctactctcttatgagttccatgatatttatattggagatgactccttcagcaagtcagaagttgagaatgcaaaagaagtgtctggtgaaataagtgaggatttggagttcggtactcctacttctggccgttcctgggatttcctgagcaggagtggcagcccttactctgcatcatgctctagtcagacatcccatcggcgtgaaccatcagtggtcagagaagccaaaaaaaggatttttgagagattgtcaattgtatcatccaccgtcggtggtgaggaagaaagggaagcacgcagaagtatgggcacactaggtgagatgcttaccattccagaagtcaagaaagaccaagaagtgtttgggggagtcacattggagaacccatcacctgagatggattccgaagaaccgttcttgtgtttgccacggtctcgatctgttccgatttctttgtcttttggaggcactgagctaaatggagtagcgaccggttgtcaggaagccgagaaggaaaagaacaggaagtcattatcatttagggaaaaggtttccagtctgttctctaaaaataggaaagtggctcgggggaagctagatccatctggaattccatcaactgatgatagactcaagcatggaaattctgctactgttaatgatttcagcgaaaacgctgatcattctgcactggacaatccgcttaactgtactatacagaatgtcgatgatatttctatgccaaggctcatggctagttcttggcacatgaatgatatggaaaacatgcctgccaaggatatttcttccatcccggttattggtgccccaggaatctttggtgagtcacaggaccaaccaagtcctgtgtctgtactagatggaccatttctctccgataacagcaggagcttgctgtgctcatctgaaagtttcatcaccgcatccccacaagctttgtcgagatctccacttatcggatcattttcacgctcactttcatgggaagatcccccactggaagtcatgtcgccaaattccttgagactatcaaggcttttctctaaggctgacgaagatcaagactcattgacatttatccagaagttagtctgctctgctggcatagatagagaaggttgcatgttatccggtcctttggaactgtatttgcttgagaagttctcagattaccaagaagagggaaccaaattacgggaaaggcggtcgaaagagaagtttctattcgatgctgtcaatgaggcactcacagagctcacttggactgcagaactgatggcgtatccattgggaaggtcatcttctttggaacgcaaagattgtgagaatgctttcagtaactcggcagctgatgaaatttggcgagtcataaggaactggtcgattcttgacaagtatccacccggagaaactattgaaagaaacctcctggtggaaatgatactgaagagagaggtgttggaggcggccagcagcgacacgacacgattggagacattcgagctcaccagtatggtctgtacaatggtcttggaggacctgattgcagatgcagttgtagatctgagtgcctga</cdnaseq>

Protein Sequence

<aaseq>MRGVQDRKQKKKQDLQVLGPFPGCLGRMINMFDLSNGVVATKML TEKAHRDVSPAGKDRGNAFKMAIGPFSSQIEDKKRDSQPRKQSPTKRLSSPTKRSGEA PVKLLMEQDMWKEGMSGEEPLNVVARLMGLNDAAGHQSDLKSGKRSDKEYRSGGFDEN SRNLRPKKDSKGHPNQKAGTHSEPCSGFSDQTLRMNSSRNKHQGKEPSCEKRMTLVRE KFAEAKRLATDEKLLHTKEFQEALQFLSSNKDLFLKFLDEPNPLLSHNNYEFQPDTPP SETKQITILKPSDSIKRNGNTLVGRQLYSDGDESEGNRCRRHQSLSVSPTNSTLSEPT RIVVLKPGLVKSQEPKILRSPSSSSTAADSEDDSMSAVDETVPSSRRLAKEITWQMRM RLKDKQDEENLLSYEFHDIYIGDDSFSKSEVENAKEVSGEISEDLEFGTPTSGRSWDF LSRSGSPYSASCSSQTSHRREPSVVREAKKRIFERLSIVSSTVGGEEEREARRSMGTL GEMLTIPEVKKDQEVFGGVTLENPSPEMDSEEPFLCLPRSRSVPISLSFGGTELNGVA TGCQEAEKEKNRKSLSFREKVSSLFSKNRKVARGKLDPSGIPSTDDRLKHGNSATVND FSENADHSALDNPLNCTIQNVDDISMPRLMASSWHMNDMENMPAKDISSIPVIGAPGI FGESQDQPSPVSVLDGPFLSDNSRSLLCSSESFITASPQALSRSPLIGSFSRSLSWED PPLEVMSPNSLRLSRLFSKADEDQDSLTFIQKLVCSAGIDREGCMLSGPLELYLLEKF SDYQEEGTKLRERRSKEKFLFDAVNEALTELTWTAELMAYPLGRSSSLERKDCENAFS NSAADEIWRVIRNWSILDKYPPGETIERNLLVEMILKREVLEAASSDTTRLETFELTS MVCTMVLEDLIADAVVDLSA</aaseq>

Gene Sequence

<dnaseqindica>1829..1982#2076..2155#2266..4038#4173..4326#4416..5059#acctcctcctcctcctcctcttcttcctccccatctctctcctctccctcttcctctctcctttccgtgtgcgccattgcaacccagagaggcagaccacgcacactgcacttggacacgaagacgagagcggtttccggtctcttccccccaaccaccattccctcctcttcccgtctccggctcgccggagcgcgagagctgctgctgcggcggcgtgggcccgatcaccggccggcctcctgctccgccgccgcggctgcaatggcgcgctagctagatccgacccatccggcgcggtttaatacctcggtgtatctctccggtcaccgccggcggcggcgacggcggaggcggcggttgcgggctcgccggcggcgaagcaagcggtgcaggtatgaacaaaaagagaggaaggctagtcactccctcttttttggttaatttagttttggtgagagcgtatttcgtttgccgttttcggggagggagggaggtgaccgtttccttcccttccgtcgctttcgtctccaaaagcggcgccttttcaggtgggattaatcaatgaatcccctctcgctttccctaatcttttcttttcattgccgctgtttgttaatttgtttgatatgataggagtagtaataggagtaggaagaggaagaagagctctctcctctcctctcctcgtctttaatggattctactggtactacttcttctactactaatcttgttcgtctcgtcttctcctaccacctaccaaatcaatcccatctgctgtctactactaaccggatccatccatggggaccatgccgatcgatcaactatttcctctcccgcctctcgcattggctacaaactgcaaagcaaagtagtagcaaacatgatctcctcctgcccacttcttcttcttcttcgtggcatttccatggattcataataatagcccccaatcacgggacatccatggattctttaactttggctttgttcctgattttcgccgctacccacctctggctttgatttggttgggccttttaccacacatccattctctatttctctctctgggtaagaaaagccggtgcctttctgaggagagaatgcgagctgagctgagctttcttgcggctgcctgctttccctttcgtgtggatttgatctccccggccggacgcatcgccacccatgtcgtcccgttccggtaagaaatttcccacctttcgcggcgcggttgcgacatgtgcaagcttagcttctcttacctgcatttgcgtgatgctgctgcagtattttaatttggagattacccagggcaaaaaaaaaaagaagaaaaaaaagaggcaaagctttacatatagctttgcttttgctaccgtattcttttctgtgcatcttctttggctgctactactactactgtactgtggcctttccaggccccggggtgaagtgtgatgattagttcttgtgccatctcgcatgatagttccctgcatttctctctccctgccatattgtttgttcttctcctcggggatgcggtgggggtgagtgcatttcacgtgttgattccttgcttcccactcgttgttgtttgggatgcagttgtttctttctttgttcgtttcgttcttggccggtttgtcttgtctggttcttctctcctctccctcttcccatcgttcaaaaaaagataaaatttggagctgcttgattgttcagtgtgaatttcgaactttgaaatcttggtgatacttgcgtattctcgtgatatatcatgtatgctattttggatatttgcttgcagtgttgagagatgagaggggttcaagataggaagcagaagaagaagcaggacctgcaggttctcgggcccttccctggatgcttgggtaggatgataaacatgtttgacctcagcaatggcgtggtcgcgaccaagatgctcacagagaaagcgcatagagatggtatgcgtcttcgtctacttctgtttcccccttcttgttatgcaagattggtgctagaccaagctctgatgcaatgcagcatacgccttgcagtttctccagcaggtaaagaccgtggtaatgctttcaagatggcaattggtccattctcatcacagatagaagataaaaaggttagtgaattgtctgtccccctttgtttcctgttgcttttgaactacaaacgaactcaagcataacctggtacttagtatgtatatgtttttatttggttttactacagagagatagtcagcctagaaagcagtccccaactaaaagattgagctcaccaactaaaagatctggtgaggctcctgttaaattgctcatggagcaggacatgtggaaagaagggatgtctggcgaggagccactgaatgttgttgccagattgatgggtctaaatgatgctgccggccaccaatctgatctgaaatcgggaaaaagatcagacaaggaatatcgatctggtggttttgatgagaacagtcggaatctcagaccaaagaaggacagcaaaggccacccaaaccaaaaggcaggaacacacagtgaaccatgcagtggtttcagtgatcaaactttaagaatgaatagcagcaggaataaacaccaagggaaggagccttcttgtgagaagagaatgacccttgtgcgtgaaaaatttgctgaagcaaaacgtctggctacagatgagaagcttctccacacaaaggagttccaagaagcattgcagtttttaagctcaaataaagatctgttcttgaaattccttgatgagccaaatccactgttatcacacaacaattatgagttccaacctgataccccaccttcggagacaaagcaaataaccatactgaagccatcagactcaatcaagagaaatggcaacactcttgtagggaggcagctctattcagacggagatgaaagtgaagggaacaggtgcaggcgtcatcagagtttaagtgtttccccaacaaattcaacattgtctgaaccaacaagaattgtagtactaaagccaggacttgtaaagtcccaggaacccaagattctgaggtccccttcatcatcatcaactgcagctgatagtgaagatgatagtatgtcggcagttgatgagacagtgccaagctcaagaagactggccaaagagatcacttggcagatgaggatgcgtttgaaagacaagcaggatgaagaaaacctactctcttatgagttccatgatatttatattggagatgactccttcagcaagtcagaagttgagaatgcaaaagaagtgtctggtgaaataagtgaggatttggagttcggtactcctacttctggccgttcctgggatttcctgagcaggagtggcagcccttactctgcatcatgctctagtcagacatcccatcggcgtgaaccatcagtggtcagagaagccaaaaaaaggatttttgagagattgtcaattgtatcatccaccgtcggtggtgaggaagaaagggaagcacgcagaagtatgggcacactaggtgagatgcttaccattccagaagtcaagaaagaccaagaagtgtttgggggagtcacattggagaacccatcacctgagatggattccgaagaaccgttcttgtgtttgccacggtctcgatctgttccgatttctttgtcttttggaggcactgagctaaatggagtagcgaccggttgtcaggaagccgagaaggaaaagaacaggaagtcattatcatttagggaaaaggtttccagtctgttctctaaaaataggaaagtggctcgggggaagctagatccatctggaattccatcaactgatgatagactcaagcatggaaattctgctactgttaatgatttcagcgaaaacgctgatcattctgcactggacaatccgcttaactgtactatacagaatgtcgatgatatttctatgccaaggctcatggctagttcttggcacatgaatgatatggaaaacatgcctgccaaggtattgagcatgttatgctctgctcaaacttactttaccgattttataaaaaaaaaaggcttgtatatgtttgtgccctttcttctatagtcatccaaagttcaaaatatgaaattttggctctattttgtcaggatatttcttccatcccggttattggtgccccaggaatctttggtgagtcacaggaccaaccaagtcctgtgtctgtactagatggaccatttctctccgataacagcaggagcttgctgtgctcatctgaaagtttcatcaccgcatccccacgtaagctgaaaacccttttcatccaactatgaaatataaacagttcttcgtaatatatatgtaaatgacatctgggtgtgtgtgtgcagaagctttgtcgagatctccacttatcggatcattttcacgctcactttcatgggaagatcccccactggaagtcatgtcgccaaattccttgagactatcaaggcttttctctaaggctgacgaagatcaagactcattgacatttatccagaagttagtctgctctgctggcatagatagagaaggttgcatgttatccggtcctttggaactgtatttgcttgagaagttctcagattaccaagaagagggaaccaaattacgggaaaggcggtcgaaagagaagtttctattcgatgctgtcaatgaggcactcacagagctcacttggactgcagaactgatggcgtatccattgggaaggtcatcttctttggaacgcaaagattgtgagaatgctttcagtaactcggcagctgatgaaatttggcgagtcataaggaactggtcgattcttgacaagtatccacccggagaaactattgaaagaaacctcctggtggaaatgatactgaagagagaggtgttggaggcggccagcagcgacacgacacgattggagacattcgagctcaccagtatggtctgtacaatggtcttggaggacctgattgcagatgcagttgtagatctgagtgcctgactaacaactagcgaggtacctccacttttctaaccactaattttgcttatgcctcctaacattgctgtttcacgcgatacttgctgctgtaacactgcttcattcattcacatcaccacagaaatgcatgtgatgccaaatgtgccttttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0816400, RefSeq:Os02g0816400