Os02g0817700

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Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0817700| Description = Similar to 3-ketoacyl-CoA thiolase (Fragment)| Version = NM_001055058.1 GI:115449668 GeneID:4331150| Length = 4318 b...")
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Gene Name

Os02g0817700

Description

Similar to 3-ketoacyl-CoA thiolase (Fragment)

Version

NM_001055058.1 GI:115449668 GeneID:4331150

Length

4318 bp

Definition

Oryza sativa Japonica Group Os02g0817700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35967740..35972057

Sequence Coding Region

35968310..35968386,35968506..35968589,35968735..35968843,35968932..35969055,35969525..35969621
,35969743..35969875,35970022..35970099,35970189..35970296,35970379..35970446
,35970549..35970647,35970747..35970873,35970991..35971075,35971665..35971741
,35971850..35971930

Expression

GEO Profiles:Os02g0817700

Genome Context

<gbrowseImage1> name=NC_008395:35967740..35972057 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35967740..35972057 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcctcctccgaccaatcgctcctctccgcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggggacgacgtcgtcgtcgtcgctgcctacaggacacccatatgcaaggccaagcgaggaggtttcaaggatacatacccagaggaccttcttactgttgttctaaaggctgttctggacaacactaagatcaaccctggtgaaattggtgacattgtagttggcacggtgctaggtccaggctcgcagcgtgcaatcgagtgcagggctgcggctttctatgctggagttcccgaaaacgttcctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgttgccgcggccattaaagctgggttctacgacatagggattggtgcaggcctggaatccatgtcagtaaatgctatgggttgggaaggacaagtaaaccctaaagtaaatgaagtccagaaagcacaggattgtcttttgcccatggggataacgtccgaaaatgttgcgcaccgatatggtgtaacaagacaagagcaggatcaggctgctgctgagtctcataggagggctgctgcagccacagctgctgggaaattcaaagatgagattgttccggtgcctacaaagattgttgaccccaagactggagaggaaaagaaagttgtgatatcagttgatgatggaattaggccagggaccacagcatctggattggcaaagcttaaaccagttttccggaaggatggtaccacaactgcaggcaactctagtcaagtgagcgatggtgctggagctgttcttctcatgaggagggacgtagcgatgaagaagggacttcctattcttggtgttttcaggagctttgctgctgttggagtagatcctgctgttatgggtgttggtcctgcagtagcaataccagctgcagtgaagtctgctggactccagattgaagacattgatctgtttgaattgaatgaggccttcgcttcgcagttcgtgtattgctgcaacaagctgggactggacaggtcaaaagtaaacgtgaatggaggcgcaatcgccctaggacatcctcttggtgcaacaggtgcccggtgcgtcgcaactcttctgaatgaaatgaagcgccggggcagggactgcagattcggtgttgtcaccatgtgcattggatctggcatgggggcagcagctgtgtttgagcggggtgactcggtcgaccaattctcaaacgtgcgccaccattag</cdnaseq>

Protein Sequence

<aaseq>MEKAIDRQRVLLAHLLPSSSSDQSLLSASACAAGDSAAYQRTSA YGDDVVVVAAYRTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTV LGPGSQRAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA GLESMSVNAMGWEGQVNPKVNEVQKAQDCLLPMGITSENVAHRYGVTRQEQDQAAAES HRRAAAATAAGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPV FRKDGTTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGVFRSFAAVGVDPAVMGVGP AVAIPAAVKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAIALGHPL GATGARCVATLLNEMKRRGRDCRFGVVTMCIGSGMGAAAVFERGDSVDQFSNVRHH</aaseq>

Gene Sequence

<dnaseqindica>3672..3748#3469..3552#3215..3323#3003..3126#2437..2533#2183..2315#1959..2036#1762..1869#1612..1679#1411..1509#1185..1311#983..1067#317..393#128..208#aagtaatcggcgctttcgcgagagagagcgatacgaacaagagaaaatcttctccagacaccgcggcgggcttccccaccccatcggaaggaagaagacgaccagctcgcgcgctcggatctcagccatggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcctcctccgaccaatcgctcctctccgtgagtcaattcctcttcctctctctcgcaattctctttgtaatctccatctctctctctctctctcactggactcaattcaattcgattgttggttgattggttcaggcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggggacgacgtcgtcgtcgtcgcgtaagcttttacatccctaatccctttttttttcctactactacctgttattacttacacggaacaccaattaaggtcacctgttaatggcggatgtttgactaccactagttgctgccatgtttgaggaatagtagtaaattcaagcaactgcgctgattgacttttcttacgaatcaggattactgtaggtgcttggtatcgcgatgtacgcccatccaagtcaaatgcgttttgttgaagttaacctctttagttttaggataaaccttgtactagtagctgaaatcatactaaatcaagagtttgttacccccgcaaaaaaaaaagaagagtttgttactgctattttgcaacaagataaaagatcgcaaactctacaagtcaattctatctcttcaccacctatcacccaaagtgtattacaaactacaagttctaagctttgttttttttttagtgtttcttttttggctgtagcatgttttgtgtgcttagccatgtgaatatgccaccacgtatctgaatcgatcaacggatgtgatagatactcttctaaccactttattccatgtttatccacctgcagtgcctacaggacacccatatgcaaggccaagcgaggaggtttcaaggatacatacccagaggaccttcttactgttgttctaaaggtttgcgcctgctaatattgcccttcatgtatgctgtgattcagtggttacttcgaatttagagactatgcgttctcaatcaatcgtttgctccttttttttctatgtattttctaggctgttctggacaacactaagatcaaccctggtgaaattggtgacattgtagttggcacggtgctaggtccaggctcgcagcgtgcaatcgagtgcagggctgcggctttctatgctggagttcccggtaatactgtgtttgcggttatatcaccatatgaagacagggcttctttattatggacactggtttcatttgcttgattttacttttctgtcgatgcagaaaacgttcctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgttgccgcggccattaaagctgggttctacgacataggtaattaactagttactcgttctagacaatatggttatgctaactctgctacatggttgcttcatttaaaggtgctaatttgtctttttccatcaaaaacagggattggtgcaggcctggaatccatgtcagtaaatgctatgggttgggaaggacaagtaaaccctaaagtatgaattctatgagcaccagagcatcctctgtatttctgttgttctctggtgatgccttgtaacaccacgtactttgtaggtaaatgaagtccagaaagcacaggattgtcttttgcccatggggataacgtccgaaaatgttgcgcaccgatatggtgtaacaagacaagagcaggatcaggctgctgtgagtcacttgcatacattctgtttgtgttttttcttcccactgcttccttttactcaaaacactgtcgaaatttttgtttttaacaggctgagtctcataggagggctgctgcagccacagctgctgggaaattcaaagatgagattgttccggtgcctacaaaggtaagaggctctgggatttagttcatgtgatgtaacctagtttattgttcatggttattgttgactcatgaatggttgttgtcactggatttttcttttgctaatcaggacctgtgcaaggttcactgatattctttcctgtgcagattgttgaccccaagactggagaggaaaagaaagttgtgatatcagttgatgatggaattaggccagggaccacagcatctggattggcaaagcttaaaccagttttccggaaggatggtaccacaactgcaggtattgcagcactcttagcttttttttctgctgacactactattgcaaccaggctttgtttgtccattgcttgttacattgtgtatgtgttttttttttttaatttaacgaatctatgtaggcaactctagtcaagtgagcgatggtgctggagctgttcttctcatgaggagggacgtagcgatgaagaagggacttcctattcttggtgttttcaggtgctgcattttgcatttccttgtatatacagcatttggttcagtcttaacatgtgttcctgaatgctgtatgagatactccctctattccaaaatataaggcacaaccacccttaacccaaagaccaagaaataattattatcatcttgtagtttggatcatcctaataaatataatgcatgcatccaataggattagatagcatgagagtggaggatttaaaaaagtaataatttaatggagaagatgtcatagttaattgcatgtttgcatgtataccttatattatggaacatctaagaaaagtggttgtgccttatattatggaatggagggagtgtatcttattgttaggtgtgaacggagtttgtgatcatcattgttattgctattgctgttgggacctaatatattatcacattttcttttaactgatccatccatatgttgcctccaatcatcatttaggagctttgctgctgttggagtagatcctgctgttatgggtgttggtcctgcagtagcaataccagctgcagtgaagtctgctggactccagattgaagacattgatctgtttgaattgaatgaggtttgttactttttacaatattagctcactcgtttactcgtacctagctacaatggttgatacccatgccatctgtattcttgtataggccttcgcttcgcagttcgtgtattgctgcaacaagctgggactggacaggtcaaaagtaaacgtgaatggaggcgcaatcgccctaggacatcctcttggtgcaacaggtaatcaaatacttgtatgggagatcgtcattctggctttagaatgtgcaggtgtcaatggaagtagcattgctgtctgttagtacctgctacagatcatccaagcatgtcttctaaatggggtgattgttcctctgttggtcaggtgcccggtgcgtcgcaactcttctgaatgaaatgaagcgccggggcagggactgcagattcggtgttgtcaccatgtgcattggtgagttctttttctctggatttctctgtgtgcaggagaatgcatgcaagtagccctcgttgttaaacttccatgacatcttgtgtactagtatgtaactatgcatgaattggttgcaggatctggcatgggggcagcagctgtgtttgagcggggtgactcggtcgaccaattctcaaacgtgcgccaccattagcggcagttttctaagagaaatgcaaagcaaagcagtggtgcaaaatcatcatggtggtcagtccaatggagcatactctggcagtaagatctataccgaaaactaaatgcaggaaacacgtaatcttctccggtgaaaggtgtaacagtatattgaagatcttttcatgtaacattttgcactaataataatttatgcgaataaggggcatgcatgctcaatgtttgttttgtcaagtgttccacacgaaacactgagaggagcacagtggttgcaaatgttgaagggcctgataagggtaggcctgatcatggataatttggcccaaatcaaatctggcctggcctgatcgttgtccaaaatacttagtactactttctctgtaaaaaaataatacagtataaaacaatttattttgcttgttaggacaatgctttaatcaccaactgctttattaatatattatatttatgtgacacagaagtataattacaggaaagcatttgtgaatataaatctaatagcactcattacttttgaatgtaaatctaatgacattaattttgtctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0817700, RefSeq:Os02g0817700