Os02g0823800

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Revision as of 03:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0823800| Description = Conserved hypothetical protein| Version = NM_001055106.1 GI:115449868 GeneID:4331200| Length = 5120 bp| Definition ...")
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Gene Name

Os02g0823800

Description

Conserved hypothetical protein

Version

NM_001055106.1 GI:115449868 GeneID:4331200

Length

5120 bp

Definition

Oryza sativa Japonica Group Os02g0823800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36266239..36271358

Sequence Coding Region

36266316..36266666,36267305..36270106,36270194..36270245,36270451..36270710

Expression

GEO Profiles:Os02g0823800

Genome Context

<gbrowseImage1> name=NC_008395:36266239..36271358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36266239..36271358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccgccgcctcaggcgggcccctccccggccgtccgcgtcctctcccgcacgcccccgccacccgcctcctcctccccctccccgccgccccccgccgccaccccgccctcccacgacggcgtcgtcgccgtcggcttcgtcggcggcgggggcactgcccgcctcgccgaccggatcctggacgcccatgtgttctcccctggtggctccgccaggaccctcgcgggcggagtcaggtaccaccgcgacggggagaagagggtggtgttcctgcacctcgctccgtcgccgccgacacctctggagggggcgggcgatctacgggagctgctcttcatgttctccgtttgccatgtaataatatttctccaagaaggcttccggttcgacacacagattttgaagaaattccgtctgttgcaatcctcaaagcatgctattgcaccgtttgtgaagtcactagtagctcctgcagtgccatcaaaagttgctcgctctaatactccaacaaagcctactcacagggcctcatccatctctcctcctgcacgccgtggaggtcgtcatccctcagcaatctcgttgatgtcaggaactggctcacatccttgtatgctgccagggctatgcatccctgttgttctgtttgtctttgaggatgatatcactgatgctccaggtgctccgacaagtccggatgatacgaacgacacatcatcaaatcaagcttctaacactgatggcttgccaaaacctaacatgacttcaaaaggttctagttcagtggttatgcttgctaggccagcaatcagatctgatggtactttcagcaagaagctgcattcctctgtagaaggtcagatacgtttcttgctaaagaagtgtcggacacttgtgggtctagagccagggcatattgtttcgaggggtgtcagtaatgtgagccacctacctctgttctcacttgatacatcaagggtcgttgcactgttggatcggtcaattagtaagaaacgtgagccattggatatcattgcaggactgtttgaagactctttgacatccaaatcatcattggatgtttcttcgctggagaacaattgccatccagcaacccatgaagatgttcagttcatcaaggattttatatttcgacaatcagatgggctgagaggaagagggggacactcaagcaatacaactgctggtcctgtttctggtgttggaatggtggcagcagcagcagctgctgctgcagcatcagcagcatccgggaagcaaatgagtgctcctgatctccctactttcgatacatggttgtctataagttcatctattttgtctgcactgtttagtggggaagatgggttaagtagttcccaaaacatgaaggcatcacctactcatacaagttcatttccaaagaacgatcaacttccttcagcaggatccaacgcaattcaaactgctttatcttgcttggaaggcaataaggggcttaatgtgaaattttcttcatcatggtgccaaaggatacttccagctgctaaggaggtgtatttgaaagatttgcctgccttttacccaaccagcatgcatgaagtacagctacagaaagctttacgatccttccactcaatggttaaaggaccggctgtccaagtattctccaagaagctaaaagatgaatgccaagcaatatgggaatctggaaggcagcaatgcgatgctgtcagtcttactggcagaccatgtaagcaccagagacacggtaaatcctctccatcagatgcagcgttacagcattctagtggatatgttttcctccatgcatgtgcctgtggccggtcacgccgtcttagggatgacccttttgattttgaggcagcgaacatgacctttaactgcttctctaattgtgaagatctgttacctactcttgtgcttccaagagagaccaatgctggtgcatttccagtatcctcttggcgtttggtgcggcttggaggagcaagatattacaaaccaacaaaaggattgctccaagcaggtttttgctccaaggaaaaatatcttttaaggtggacgatttctcttgggaaaggacaagggaaacatggcactcatgctaccaataaacctttctccacggcatctaatgcagatcctcaggctccccctattgttgctggagaagtaaaatcggccgtgacccaagtcacagcagaaattaaatctatgaaacttgaaaattctagaaaacaacctgaagtcgagtcaatgaacaattcaagtattaattttggtaaaggtcttccaaactttactatgaagaagccttttgctgaagttgttgctggccacacagcaagggattctgagtttcctgctctccaacagaagaggccattaaaacctggcaactggaaagatgagcggcaagtgagtggagcagaccaaactaatggccgtggtcatccagctcttagtcaaggacctatagctgacaatgaatctgagaaagtgagcagagataagagtaatggaagtgctggcggaaagccatttctacagatagggagcaatatagtgccaatggttgtcggaaaagagactaaagaagttaatcaatctatacagcagttcatggtatatgtcggatttgagcacgagtgttcctatggtcatcgtttcttactgtcagagaaacatctcaaggagattgattcgtcttatttgcagtttgaaagatctaatctaaataatgaagcagaaagcaaacatggttcacaaaagttgccccaaaatgcatctagattagcagcaacaatggatgtgaccagcggagggaagctcaataggccaatggattcatcagggagaaacagccagcagcaattgcttaagcccagggttgacgctgagaccttgcagccttctcactggctttcagatccacagaatgaaagaaagggagagctttctcttcattatgttacacttgatgatggtggagaagcattttcacttctaaacagaaatctgcccatatatatgcactgcccacattgcaagagctcagataggaagggaaatcaagatgcaaaggttgctgctgctgtgtcacaacttcaacggatttttattgtcacacctgatttccctgttctgctggcaagctgcccagttgtacagtttgaggcctcatgtttgccttcaaatgcttctgaccatgatcaacaaggatcgttcagtcttggttgtcgagttgtccttccacctgagagctttcttaccatgagacttccatttgtctatggtgttgagacaagagatggaaatacagctcccctgaaataccttgaggaacaaccagaactcacagcttggcttgttggaggcacagctttgcagattgtatcagtagggcatactaatgagaaagaagcaccactgtga</cdnaseq>

Protein Sequence

<aaseq>MEPPPQAGPSPAVRVLSRTPPPPASSSPSPPPPAATPPSHDGVV AVGFVGGGGTARLADRILDAHVFSPGGSARTLAGGVRYHRDGEKRVVFLHLAPSPPTP LEGAGDLRELLFMFSVCHVIIFLQEGFRFDTQILKKFRLLQSSKHAIAPFVKSLVAPA VPSKVARSNTPTKPTHRASSISPPARRGGRHPSAISLMSGTGSHPCMLPGLCIPVVLF VFEDDITDAPGAPTSPDDTNDTSSNQASNTDGLPKPNMTSKGSSSVVMLARPAIRSDG TFSKKLHSSVEGQIRFLLKKCRTLVGLEPGHIVSRGVSNVSHLPLFSLDTSRVVALLD RSISKKREPLDIIAGLFEDSLTSKSSLDVSSLENNCHPATHEDVQFIKDFIFRQSDGL RGRGGHSSNTTAGPVSGVGMVAAAAAAAAASAASGKQMSAPDLPTFDTWLSISSSILS ALFSGEDGLSSSQNMKASPTHTSSFPKNDQLPSAGSNAIQTALSCLEGNKGLNVKFSS SWCQRILPAAKEVYLKDLPAFYPTSMHEVQLQKALRSFHSMVKGPAVQVFSKKLKDEC QAIWESGRQQCDAVSLTGRPCKHQRHGKSSPSDAALQHSSGYVFLHACACGRSRRLRD DPFDFEAANMTFNCFSNCEDLLPTLVLPRETNAGAFPVSSWRLVRLGGARYYKPTKGL LQAGFCSKEKYLLRWTISLGKGQGKHGTHATNKPFSTASNADPQAPPIVAGEVKSAVT QVTAEIKSMKLENSRKQPEVESMNNSSINFGKGLPNFTMKKPFAEVVAGHTARDSEFP ALQQKRPLKPGNWKDERQVSGADQTNGRGHPALSQGPIADNESEKVSRDKSNGSAGGK PFLQIGSNIVPMVVGKETKEVNQSIQQFMVYVGFEHECSYGHRFLLSEKHLKEIDSSY LQFERSNLNNEAESKHGSQKLPQNASRLAATMDVTSGGKLNRPMDSSGRNSQQQLLKP RVDAETLQPSHWLSDPQNERKGELSLHYVTLDDGGEAFSLLNRNLPIYMHCPHCKSSD RKGNQDAKVAAAVSQLQRIFIVTPDFPVLLASCPVVQFEASCLPSNASDHDQQGSFSL GCRVVLPPESFLTMRLPFVYGVETRDGNTAPLKYLEEQPELTAWLVGGTALQIVSVGH TNEKEAPL</aaseq>

Gene Sequence

<dnaseqindica>78..428#1067..3868#3956..4007#4213..4472#agttggcgtctcgcaatacacagacagaggttgctgctactgcggcggcgccacccacccccacctcgccgccggcgatggagccgccgcctcaggcgggcccctccccggccgtccgcgtcctctcccgcacgcccccgccacccgcctcctcctccccctccccgccgccccccgccgccaccccgccctcccacgacggcgtcgtcgccgtcggcttcgtcggcggcgggggcactgcccgcctcgccgaccggatcctggacgcccatgtgttctcccctggtggctccgccaggaccctcgcgggcggagtcaggtaccaccgcgacggggagaagagggtggtgttcctgcacctcgctccgtcgccgccgacacctctggagggggcgggcgatctacgggagctgctcttcatgttctccgtgagtgtttataatcgtttcgatgtagatcatgagatggtgattctagctgtgaaggaggtctcagcttttgttttgccctgatatgatatgaagctatcatagcgcggtctctacatttgtattaggtcatctacctctaaattgtcacgctgtgtagcagccaatgcaaactacagaacttggtacagtaatttagtggctgggttcaatctttctcatgcctaactggataactttgacaactacgatcggttagttttgaagtggcgatgttgtgggagataggggcatcatttatccagctgttacctggaccgtgggaatgcaaaataaactaaaaaaaaaatctgtggttagctgataaatgcacttgtttcctaacttgatttgccagggagaaaaatttaagatgacacttttaagtttgtttatccagttgtagcaattaaattaacctatttgttgtggttttcctaccttgcttgcaaatcctcgtgcgattcaaatttgtcagtaacatttgattggtgctctgatcctagaagttaccgtcaaactttagctaatggaaatttaggattcagttgtttggtaatgttgattttgatttgcttttattttctatacgttgccaggtttgccatgtaataatatttctccaagaaggcttccggttcgacacacagattttgaagaaattccgtctgttgcaatcctcaaagcatgctattgcaccgtttgtgaagtcactagtagctcctgcagtgccatcaaaagttgctcgctctaatactccaacaaagcctactcacagggcctcatccatctctcctcctgcacgccgtggaggtcgtcatccctcagcaatctcgttgatgtcaggaactggctcacatccttgtatgctgccagggctatgcatccctgttgttctgtttgtctttgaggatgatatcactgatgctccaggtgctccgacaagtccggatgatacgaacgacacatcatcaaatcaagcttctaacactgatggcttgccaaaacctaacatgacttcaaaaggttctagttcagtggttatgcttgctaggccagcaatcagatctgatggtactttcagcaagaagctgcattcctctgtagaaggtcagatacgtttcttgctaaagaagtgtcggacacttgtgggtctagagccagggcatattgtttcgaggggtgtcagtaatgtgagccacctacctctgttctcacttgatacatcaagggtcgttgcactgttggatcggtcaattagtaagaaacgtgagccattggatatcattgcaggactgtttgaagactctttgacatccaaatcatcattggatgtttcttcgctggagaacaattgccatccagcaacccatgaagatgttcagttcatcaaggattttatatttcgacaatcagatgggctgagaggaagagggggacactcaagcaatacaactgctggtcctgtttctggtgttggaatggtggcagcagcagcagctgctgctgcagcatcagcagcatccgggaagcaaatgagtgctcctgatctccctactttcgatacatggttgtctataagttcatctattttgtctgcactgtttagtggggaagatgggttaagtagttcccaaaacatgaaggcatcacctactcatacaagttcatttccaaagaacgatcaacttccttcagcaggatccaacgcaattcaaactgctttatcttgcttggaaggcaataaggggcttaatgtgaaattttcttcatcatggtgccaaaggatacttccagctgctaaggaggtgtatttgaaagatttgcctgccttttacccaaccagcatgcatgaagtacagctacagaaagctttacgatccttccactcaatggttaaaggaccggctgtccaagtattctccaagaagctaaaagatgaatgccaagcaatatgggaatctggaaggcagcaatgcgatgctgtcagtcttactggcagaccatgtaagcaccagagacacggtaaatcctctccatcagatgcagcgttacagcattctagtggatatgttttcctccatgcatgtgcctgtggccggtcacgccgtcttagggatgacccttttgattttgaggcagcgaacatgacctttaactgcttctctaattgtgaagatctgttacctactcttgtgcttccaagagagaccaatgctggtgcatttccagtatcctcttggcgtttggtgcggcttggaggagcaagatattacaaaccaacaaaaggattgctccaagcaggtttttgctccaaggaaaaatatcttttaaggtggacgatttctcttgggaaaggacaagggaaacatggcactcatgctaccaataaacctttctccacggcatctaatgcagatcctcaggctccccctattgttgctggagaagtaaaatcggccgtgacccaagtcacagcagaaattaaatctatgaaacttgaaaattctagaaaacaacctgaagtcgagtcaatgaacaattcaagtattaattttggtaaaggtcttccaaactttactatgaagaagccttttgctgaagttgttgctggccacacagcaagggattctgagtttcctgctctccaacagaagaggccattaaaacctggcaactggaaagatgagcggcaagtgagtggagcagaccaaactaatggccgtggtcatccagctcttagtcaaggacctatagctgacaatgaatctgagaaagtgagcagagataagagtaatggaagtgctggcggaaagccatttctacagatagggagcaatatagtgccaatggttgtcggaaaagagactaaagaagttaatcaatctatacagcagttcatggtatatgtcggatttgagcacgagtgttcctatggtcatcgtttcttactgtcagagaaacatctcaaggagattgattcgtcttatttgcagtttgaaagatctaatctaaataatgaagcagaaagcaaacatggttcacaaaagttgccccaaaatgcatctagattagcagcaacaatggatgtgaccagcggagggaagctcaataggccaatggattcatcagggagaaacagccagcagcaattgcttaagcccagggttgacgctgagaccttgcagccttctcactggctttcagatccacagaatgaaagaaagggagagctttctcttcattatgttacacttgatgatggtggagaagcattttcacttctaaacagaaatctgcccatatatatgcactgcccacattgcaagagctcagataggaagggaaatcaagatgcaaaggttgctgctgctgtgtcacaacttcaacggatttttattgtaagctgctctccttttgaaccttgtagtatttatctgttctttaatattgtcttttcactgatacggctactctttttggtgaaggtcacacctgatttccctgttctgctggcaagctgcccagttgtacagtttgaggcaagtacaatcatccctactcatgtagtcgttttatcttctcaatgttctagtatcaagcaaatgaatctcttcttgatattttagtatcgaacaaatgaaattctcacttgtaaactgggatcatgggatgcaatttttttttacgacatgcatttcttaaatattatgcgagttaagtttcgttttatctcactggcatcaggcctcatgtttgccttcaaatgcttctgaccatgatcaacaaggatcgttcagtcttggttgtcgagttgtccttccacctgagagctttcttaccatgagacttccatttgtctatggtgttgagacaagagatggaaatacagctcccctgaaataccttgaggaacaaccagaactcacagcttggcttgttggaggcacagctttgcagattgtatcagtagggcatactaatgagaaagaagcaccactgtgaagtgcgaaacgtgggctcttaagatttattcgttttggtgtatcctatttttgcattcagtgatgggcaattggtaagatgatgcactgatattgtactttggtcattacccatctttagtcaacttatatggatattatctacttcattcatttttcaggttccagcattgaatttcaggattccggcaagtgtaatggctcatgatgtttacatggaggtctcgcctctcctgctggatttacgatgctatgctattgatacaactctagcttccttttgcattgagaaacaggagctctcttgacaagatgaatgatgcacaatggatgcattggagtgagctggtgatgcaggtacgcaatgtcagttctaaactttcactgtagtacacgagatgggattggtatatccagtgaacccgatgtttgttattgatgcagggaactggacatgtacattaataggtgtcaggtaaaatttcactgttgtatattaatagatgttccacgacaattcgcctttgtctcagaattttagtcccatgagttagtccgttttagcatgtaatggtttaggcttttagtcagtctaaatgctgctgtactgttgggcataataataaattttacactgtctttgtaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0823800, RefSeq:Os02g0823800