Os02g0825100

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Revision as of 03:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0825100| Description = Cyclin-like F-box domain containing protein| Version = NM_001055114.2 GI:297600150 GeneID:4331209| Length = 5054 bp|...")
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Gene Name

Os02g0825100

Description

Cyclin-like F-box domain containing protein

Version

NM_001055114.2 GI:297600150 GeneID:4331209

Length

5054 bp

Definition

Oryza sativa Japonica Group Os02g0825100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36324416..36329469

Sequence Coding Region

36324416..36324439,36324623..36325045,36325230..36325919,36326269..36326361,36326733..36326867
,36327808..36328323,36328411..36329334,36329434..36329469

Expression

GEO Profiles:Os02g0825100

Genome Context

<gbrowseImage1> name=NC_008395:36324416..36329469 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36324416..36329469 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaataagaagggtagtcgccgcaaccgcaataaatcagcagctcacaataaccacctactagtagtggataggttcaccaagcttcctgatgatgtcctgctcaacatcctcgaacgcctcaacacccccgacgctgtcaggacatgcctcctttctaagaggacgatccaccttcgacatttgctctcaaacttaaacatttcgctgcattcctttttgccccattattatggttattatgccacctccaaggatgcaattcagattcagatgaatgctgctgtgtcagatgcaacagacaacatcctcaatttcagaaaccaagagattccccttcgccaactcagcataaccttctacctcaagtactatgattgtctcgccattggcaaagctgttgcccgagcaatggccacccacagccacaacctcgacagcgttgaattcattattctgacagggaagcgggcactatattgctctatcgacgatctccgccacaatggcaagctgctcatgacatttttcggtgcctgtactgatgcatttgccggccttacgcgtctccacctacgcaacttaaggcttgctgaagctgacattccaaacatcatcgccacatgcaaacggctagagtatttgaaattgtccgcgtgtcaaatagaggatagtgtattgcagctacagttggaacacccacaccttgttgagcttgatatctccactgcgaacttagacctagttgagctcaactccctaccaaacctcaaacgattggtttttagtgtgtgggtttgtccccaagaacccttgtcttttggcaacgttccattgctttcaagcctaagcctcactaatgtagccatgagatggcataaggttatcaggttaagtcagttccttgctaatatcaccttcataaaagacctgcacctcaatttcttaagtgagaagatttgggttcatccggagtgcccggaactgttgacgcctgttctccagaatctgcaagttttgaatctggatgaactccctgaagaatgtgatatcgcttggacaagtttctttcttgaggccgcaccctccctgaaggagatgtgcatcacagtttgggaccattggtgtgagattgagacagacaaggtggaacgggaagaacagggttactgcgacaaaacaaacttggagtggaggtcatctgcacgtgatggtttcaggcattacaacctgactaagtttaccatctatggtttccaaccaaatgagaacttccttggatacatcaggcacatcatggaagctgctgttaacctagaggacatatccctgtacgacaggaaggctcttgagtgctgtgaagacttggatcccaagatcaaggttgctccgtcaaggtatccgcagaacatcgtggagcaggagctgctgaggaagcaaattacggagggattggtgatggcgtcgcctcattatataaacaagtcaggaggagccgacgtccatcgcaataagcgcagcgcttgtctgttatggtcaggccccgccgttgaacattggaattcattaaccatgaagaacaagaagggtagtcgccgcaaccgcaataaatcagctcccgtaatggtggtggataggttcaccacgctacctgatgacatcctgctcaacatcatggaccgcctcgacacccccgatgccgagactatcgtgatgaacgccgccgtggccgatgcaacggacaatgttctcaatttcagagccaaagagatccctcttcgccaactcagcatatgtttctacttaaaatactacgattgtctcaccatcggcaaagctgttgcccgagccatggcaacccacaagcttgacagcgctgagttcagaattctgacagattataagctacattattacactttttatggtctccgcaacaatgggaaacggctcatgaccttttttggtgcttgtactgatgcctttgctgggcttacaagactctacttacagaacttgaggcttgctgaaactgacattcccaatattattgccacatgcaaacgattagagtctctgcgtatgttcatgtgtcaaacagagggtactgtgttgcagctgcaggtggaacaccagcggcttgttgagcttgatatctgccacggatgtttaaaactagtcaagctcaattctctaccgaaactcgaacggctggtctttaatagttggagacatccccaagaacccttgtattttggcaatgttccgcagctgtcaagcctaagcctcactaatgtaggtctgagattgcacaaccttatcagattaagtcagtttctttctaatgtaacctccataagagacctgcatctcaacctcaaaagtgaaagggatgtgataacacgcttctttcttgaagctgcacccttcctgaaggagctatgcatcacaatttgggaccattggtgtaatattgtgacggacaaggtggaacgggaagaagagggttactgtgacaaaacaaacgtgcagtgggagtcatcttcacctgatggtttcaggcattgcaatctggttaagctcaccatctacggtttccaacctgatgacaactttttgggatacatcaggcacatcatggaaaccgcggttaacatagaggagatatccctgtacgaccggaaggtggaagattgctgtgaagagttggatcccaaaatcaaggttgctccgtcaaagtatccgcagaccgtcgaggagcaggagttgctgaggaagcaaattacagagggattggtgatggcatcgcctcatgccagtaacttggatatactataa</cdnaseq>

Protein Sequence

<aaseq>MKNKKGSRRNRNKSAAHNNHLLVVDRFTKLPDDVLLNILERLNT PDAVRTCLLSKRTIHLRHLLSNLNISLHSFLPHYYGYYATSKDAIQIQMNAAVSDATD NILNFRNQEIPLRQLSITFYLKYYDCLAIGKAVARAMATHSHNLDSVEFIILTGKRAL YCSIDDLRHNGKLLMTFFGACTDAFAGLTRLHLRNLRLAEADIPNIIATCKRLEYLKL SACQIEDSVLQLQLEHPHLVELDISTANLDLVELNSLPNLKRLVFSVWVCPQEPLSFG NVPLLSSLSLTNVAMRWHKVIRLSQFLANITFIKDLHLNFLSEKIWVHPECPELLTPV LQNLQVLNLDELPEECDIAWTSFFLEAAPSLKEMCITVWDHWCEIETDKVEREEQGYC DKTNLEWRSSARDGFRHYNLTKFTIYGFQPNENFLGYIRHIMEAAVNLEDISLYDRKA LECCEDLDPKIKVAPSRYPQNIVEQELLRKQITEGLVMASPHYINKSGGADVHRNKRS ACLLWSGPAVEHWNSLTMKNKKGSRRNRNKSAPVMVVDRFTTLPDDILLNIMDRLDTP DAETIVMNAAVADATDNVLNFRAKEIPLRQLSICFYLKYYDCLTIGKAVARAMATHKL DSAEFRILTDYKLHYYTFYGLRNNGKRLMTFFGACTDAFAGLTRLYLQNLRLAETDIP NIIATCKRLESLRMFMCQTEGTVLQLQVEHQRLVELDICHGCLKLVKLNSLPKLERLV FNSWRHPQEPLYFGNVPQLSSLSLTNVGLRLHNLIRLSQFLSNVTSIRDLHLNLKSER DVITRFFLEAAPFLKELCITIWDHWCNIVTDKVEREEEGYCDKTNVQWESSSPDGFRH CNLVKLTIYGFQPDDNFLGYIRHIMETAVNIEEISLYDRKVEDCCEELDPKIKVAPSK YPQTVEEQELLRKQITEGLVMASPHASNLDIL</aaseq>

Gene Sequence

<dnaseqindica>5031..5054#4425..4847#3551..4240#3109..3201#2603..2737#1147..1662#136..1059#1..36#atgaagaataagaagggtagtcgccgcaaccgcaatgtaagcctttttcttcatctttcgcttccttcattttgcatttacctatttacttgttatatttgcttaatcctgtttcgcaaaattatattgatgcagaaatcagcagctcacaataaccacctactagtagtggataggttcaccaagcttcctgatgatgtcctgctcaacatcctcgaacgcctcaacacccccgacgctgtcaggacatgcctcctttctaagaggacgatccaccttcgacatttgctctcaaacttaaacatttcgctgcattcctttttgccccattattatggttattatgccacctccaaggatgcaattcagattcagatgaatgctgctgtgtcagatgcaacagacaacatcctcaatttcagaaaccaagagattccccttcgccaactcagcataaccttctacctcaagtactatgattgtctcgccattggcaaagctgttgcccgagcaatggccacccacagccacaacctcgacagcgttgaattcattattctgacagggaagcgggcactatattgctctatcgacgatctccgccacaatggcaagctgctcatgacatttttcggtgcctgtactgatgcatttgccggccttacgcgtctccacctacgcaacttaaggcttgctgaagctgacattccaaacatcatcgccacatgcaaacggctagagtatttgaaattgtccgcgtgtcaaatagaggatagtgtattgcagctacagttggaacacccacaccttgttgagcttgatatctccactgcgaacttagacctagttgagctcaactccctaccaaacctcaaacgattggtttttagtgtgtgggtttgtccccaagaacccttgtcttttggcaacgttccattgctttcaagcctaagcctcactaatgtagccatgagatggcataaggttatcaggttaagtcagttccttgctaatatcaccttcataaaagacctgcacctcaatttcttaagtgagaaggtaatttactttaagcaatcctctctggttatttgttccttgttcttgacataaatctgaatcctttattattgatatgtactgcagatttgggttcatccggagtgcccggaactgttgacgcctgttctccagaatctgcaagttttgaatctggatgaactccctgaagaatgtgatatcgcttggacaagtttctttcttgaggccgcaccctccctgaaggagatgtgcatcacagtttgggaccattggtgtgagattgagacagacaaggtggaacgggaagaacagggttactgcgacaaaacaaacttggagtggaggtcatctgcacgtgatggtttcaggcattacaacctgactaagtttaccatctatggtttccaaccaaatgagaacttccttggatacatcaggcacatcatggaagctgctgttaacctagaggacatatccctgtacgacaggaaggctcttgagtgctgtgaagacttggatcccaagatcaaggttgctccgtcaaggtatccgcagaacatcgtggagcaggagctgctgaggaagcaaattacggagggattggtgatggcgtcgcctcatgtaattcacttccggtcttaattttgctcggtgcaaaactgtgattcgctgtgtggtactggaaataatatatgctgaatgttctgaatattttggttccttttccttctttgttatgaaatattctggtttcaaacgtttaaaggcattgattgaacttgtcttctttcctgcaaccttggtttcaggccggtagccagcacatatttaagcttgctgcataataatatatatcctgaatattctggtttcccttttctatttggtgcaatgaaatattttccaccctttgtccagtaagagaacttgccatccagctcacagctgaagcaaatgtgttttgttcaagtaccaccaagagattggtgttcaatctcttatcagtggtactagattcaagcgagatcaaaggcgtttataatctaatcaatgccaggtttgtaatatttactgacctactgaagatgaaggtaaaaagactggtaactgtttgtctgaagtgtgtgtatatataggctatgtttagattcgaagtttggattcaaatttcagtccttttctatcacatcaatctatcatacacataactttttagtcacattatctctaatttcaattaaaattcaaactttacgttgaactaaacataaccatattagcaatcggtttcgttccgtagccttcgcctggaaaagtctatccggacacgccacgcctccatccatcagctggtgactagtactagtattgagtttctattgttgattgattcctttaaccaatttattccaaaaaaaaaagtatatataaacagctcatgcaatcgaatcagtctcgaatgcgatgaaaagccataaaaatcatcgagtgtgtccaatattttcctattctaatcggattcagtcggaggcgccttcttttcctcttcttctcctctcagtatataaacaagtcaggaggagccgacgtccatcgcaataagcgcagcgcttgtctgttatggtcaggccccgccgttgaacattggaattcattaaccatgaagaacaagaagggtagtcgccgcaaccgcaatgtaagccgtctattcccttcctactacctccatattttaatgtatgacgccgttgactttttattaaatgtttgatcattcgttttatctaaaaaatttatataattatcatttattttattatgatttgattcgtcattaaatgttctttaaacatgacataaatattttcatatttgtataagaatttcgaataaaacgaatggtcaaacgttggtcgaaaaatcaatggcttcataaatacgaagggagtacttactgatttgcattgcatctgtcatgtcagtcttctctttccctgtcgatccatgactactgttgcactaattaatttattattagtttcacaaataaacactatatcgatgcagaaatcagctcccgtaatggtggtggataggttcaccacgctacctgatgacatcctgctcaacatcatggaccgcctcgacacccccgatgccgtcagaacctgcctcctctctaagaggacgctccacctccgacacatgctttcgcgctttcaaattggcctactcgctccgtcccaaaaaaaaagacaaaccctggtttccgtgtccaacgttttaccatccgtcttatttaaaaaaattaaaaaaaaattaaaaagacaagtcacgcataaaatattaatcatgttttattatctaacaataatgaaaatacgaattataaaaaaattttatataaaacggacaatcaaagttggacacggaaactcagatttgactttttttttggatggagggagtagtttcgttcgcgccagatcctgattatatcacttttaaggagactatcgtgatgaacgccgccgtggccgatgcaacggacaatgttctcaatttcagagccaaagagatccctcttcgccaactcagcatatgtttctacttaaaatactacgattgtctcaccatcggcaaagctgttgcccgagccatggcaacccacaagcttgacagcgctgagttcagaattctgacagattataagctacattattacactttttatggtctccgcaacaatgggaaacggctcatgaccttttttggtgcttgtactgatgcctttgctgggcttacaagactctacttacagaacttgaggcttgctgaaactgacattcccaatattattgccacatgcaaacgattagagtctctgcgtatgttcatgtgtcaaacagagggtactgtgttgcagctgcaggtggaacaccagcggcttgttgagcttgatatctgccacggatgtttaaaactagtcaagctcaattctctaccgaaactcgaacggctggtctttaatagttggagacatccccaagaacccttgtattttggcaatgttccgcagctgtcaagcctaagcctcactaatgtaggtctgagattgcacaaccttatcagattaagtcagtttctttctaatgtaacctccataagagacctgcatctcaacctcaaaagtgaaagggtaattaatttaagcaagtctctctctctatcatgttatgaacatctcattctcaacttaacccctgcatccttcctttatgacttgtttgtattacagatttgggttcagccagagtgcccgaaactgctggcgcctgttctccagaatctgcaagttttgactctggatgatctccgtgaaggatgtgataacacgcttctttcttgaagctgcacccttcctgaaggagctatgcatcacaatttgggaccattggtgtaatattgtgacggacaaggtggaacgggaagaagagggttactgtgacaaaacaaacgtgcagtgggagtcatcttcacctgatggtttcaggcattgcaatctggttaagctcaccatctacggtttccaacctgatgacaactttttgggatacatcaggcacatcatggaaaccgcggttaacatagaggagatatccctgtacgaccggaaggtggaagattgctgtgaagagttggatcccaaaatcaaggttgctccgtcaaagtatccgcagaccgtcgaggagcaggagttgctgaggaagcaaattacagagggattggtgatggcatcgcctcatgtaattaacttccggtcttaattcatcagcgcgaaaatgcgattagctgagtagcaataatgtatgctgaatgttctgaatatttttggtttcttcttctttccttttgtgacgaaacactctagtttcaaacgtttcaaggcatgcattagaattctcttgtttcctgcaacttggtttcaggccagtaacttggatatactataa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0825100, RefSeq:Os02g0825100