Os02g0827900

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Revision as of 03:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0827900| Description = Similar to Signal peptidase 18 subunit (Fragment)| Version = NM_001055131.1 GI:115449970 GeneID:4331226| Length = 57...")
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Gene Name

Os02g0827900

Description

Similar to Signal peptidase 18 subunit (Fragment)

Version

NM_001055131.1 GI:115449970 GeneID:4331226

Length

5760 bp

Definition

Oryza sativa Japonica Group Os02g0827900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36459259..36465018

Sequence Coding Region

36460064..36460189,36463529..36463586,36463693..36463780,36463959..36464004,36464111..36464146
,36464313..36464381,36464521..36464633,36464871..36464910

Expression

GEO Profiles:Os02g0827900

Genome Context

<gbrowseImage1> name=NC_008395:36459259..36465018 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36459259..36465018 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagattcgccacgccctcgtccacctcattaccctggggatggttatcagctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagttgtggttctatctgaaagcatggagcttggatttgaaaggggggatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgttttcaatgatggccgtgaaattccaatcgtccatcgcgttattgaggttcacgaacgacgggataatgcacaagttgatttcctcacaaaaggtgacaacaatcctatggacgaccgaattctttacacacatgggcagctttggcttcagcaacatcacatcatgggacgggccatagggtatctacccaaagctgggtgggtgacattggtgatgactgagaaaccagttattaagacaaatcaagctgcaaatttgcaggtgatggggtgcttcaattccaaaccaaacaatgccggtgcgatcagaagaagacatgggagggtagaagtggatgtttgcgcctggattatgagttcctga</cdnaseq>

Protein Sequence

<aaseq>MQIRHALVHLITLGMVISSALMIWKGLIIMTGSESPLVVVLSES MELGFERGDILFLQMSKHPIRTGDIVVFNDGREIPIVHRVIEVHERRDNAQVDFLTKG DNNPMDDRILYTHGQLWLQQHHIMGRAIGYLPKAGWVTLVMTEKPVIKTNQAANLQVM GCFNSKPNNAGAIRRRHGRVEVDVCAWIMSS</aaseq>

Gene Sequence

<dnaseqindica>4830..4955#1433..1490#1239..1326#1015..1060#873..908#638..706#386..498#109..148#gtagtagctgcttctcctcccgatcgagcagaggcagtagtagcttagctagcagatatatactgtagcgatggagtaatatgatcgtcgatcgagccgatccgcgcgatgcagattcgccacgccctcgtccacctcattaccctgggtaacaatcgatcctttttttcttttcttttttgcataatattacgcctttttgcgcttcgattaaattgctagtgcctgtagaccttgtcccttcatatgcctgactgactgactccaaacaggcgtgaattcaatggataaagacagtgaattttgattagaattagtgtgtttgtatatgctgctcgttctccctccccgtttagttaatctgtttgttgtttggcactgacagggatggttatcagctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagttgtggttctatctgaaagcatggagcttggatttgaaagggtctgtttattttccttcctccatcccatggcatgaattcactactaatcactctaccattttcttcaaactgttgtcatctatatgtcctagcttgtgattcacctgatcaatgttagtgtgtttgcttgcctggcagggggatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgttttcaatgatgtaagtccctactgaattgtcactggtttatcgatcaccataaaaatattttctgaatcatcaacaaagcagccctttctccaaccttgttttaatgatgctaatacacgtgcatcatttgcaaggcactaattaacttattgcgatttgcctctttgatttgtagggccgtgaaattccaatcgtccatcgcgttattgaggtcgttaagctttgtaatatccacaccaatcagtctccccttacatttgatctcaggtattatgtctgaaaattttccttgttaattatattatatctccttgtaggttcacgaacgacgggataatgcacaagttgatttcctcacaaaaggtatacttacacttattactattttctatcagtggttttgacctcctaattttgttccttgcatattaattaagtaatctgaatcatatatatctgttggctcaagtgatgagcatgaattaatttgtactgtgaatagcgctgcgttatactgatcgatgaactgtctcattatcaggtgacaacaatcctatggacgaccgaattctttacacacatgggcagctttggcttcagcaacatcacatcatgggacgggccatagggtaaaaatactttcaccttggcttaattgtctactggagtagtacttgtgaatttgtgttttggtgatgggctgattaatatactgttcttctgtaatgttaacaggtatctacccaaagctgggtgggtgacattggtgatgactgagaaaccagttattaaggtatgcacatttacccttattatattactggtctatatagctataagcatatactagtgttgcaagagtcctactgtgagctttgcatcggtgcaaagaagttaattagttcgtgttttgtctgaaatgtgttgtttacctgctgatcgatgcgctggggctgctgctcatcacatcaagctagtacaacaaattggtcggaacatgtttctaacactcagggaattggaggaaagcattggtttttggaaggctaaaaaaaccagcagcatacttgtgtttagaggagtattaattagctactcctacagtattgtaatgtcgagggattttgcatattcttccgcccggacggttgggttcagaatgctatccaaaacttgtttaacaatgcgggatgcatacggaacctcacttagcttttacaactttctcgtttatcataaattcgcttaccaaactattaaatattctgtaaatatttttatattaaaaaaatttaaaataaacttatttttcaagtttatagctagtacactaatcatgttttttttttcattttgtgtacggcaaaaagcaaagcttccgagcatagactaaggccttgtttgtttcaatttaacattactgtaatccagattattgtaatctttaacgacttgggaaaaaaaattcaacaacaactttgaaataaaatttcccttgcaatctggaccgttcagtctgtggatcagacggcaaggcagatacactcgtcgtcatcggctgctactagtagtagcaccttgagtaagaggtgattcccgctgatggcgccgcctcccgccggcgtggaggccgtctgcgccgccgtcatcaaatccacgctaacccaaccccacaaccaccaccacctgctcgcggcctcgccctccctcctcgccgccgtcctccaccgcctctccccgctcccctccaccgcgctcgccttcttccgctccctgcctccgccccacccgctcgacgcctccctcgccctcctccgcctcctcgccccccacccgcgccaccaccccaccgcccgctccctcctccgcgacctctccctccgccacccgctctcctccccgctcctcctcccttccctcctcgccgacccccacctccccagctggctcctcctcctcctctcccagtccgcccgcccgcacgacgccctccgcgtcttcgaccacatgcgcgcgcgcgaggtcgtccccgacgcgcatgcctcctccgcgctcctcaccgcgctcgcgaagtcccggatgacggccaccgcgcgcaaggtgttcgaccaaatgacgcgggccggggttgccatgaacacccacgtgtacaacgccatgctgcacgtctgcttgaaggccggggacgccgcgctcgctgagtctctgatgacgcggatggacgccgccggtgtgccgctcgataggttctccttcaacaccgtcatcgcgctctactgcaggaagggcatgcagtacgaggccatgtgcgtacgggagcggatggagaatcagggtgtcaaggctgacgtcgtcacatggaactcattgatccatggcttgtgtaaggagcgcagggtgaaggaggcgagtcagctgctgagagagatggcgatggcaggggtggcaccggaccatgtcacatacaccacgcttgttgatgggtactgtcgagcaggcgacttggaggaggcggtcaagctgcgaggggagatggaggcaatggggatgctaccaggtgtcgcgacatacaatgcgattctcaggaagctctgtgaagatggcaagatgaaggaggtcaatgtgttacttaatgagatggatgagaggaaggtgcaggctgatcatgtaacgtgcaacacgctgatcaacgcatactgcaagagaggggacatgacctcagcgctcaaggtgaaaagaaggatgatggagtcagggctacagttggatcagttcacttacaaggctctcgtccatggtttctgtaaggccaaggagctggatgaagccaaggaagccttgtttgagatgatgggtgcaggtactacaaatctaactaaaatttatggctctgattggtagcgatagtacatcatcaagacttaataatgcatattgagagatcctttttgttataatagaaaagcatgcagcatctttgactctgttttatcagttatcaatccatatcagtattttctaatgatgtttggtatatcttgtgttttttccccttgtacgcaggattttcacccaattatagtgtgttgtcatggattgtcgatggtttatgcaacaagaataatgcagttgcagttctagccattcctgatgaacttatgaaaagaggatttccaccagataaagcagtatataggtctctgatccgaaggctatgcaagaaagggtttattgatcttgctgggaatgtgttcaatgaaatgcaaggcaaaggtctagaagctgactgtcttgtgtatgctacacttgcgtgtgcatatctgactgctgggaagccagttgctgctttggatatcttgaatgagatggcgaagaagcagttgtacataacaccccagatttacaactgtatgtgtacctcttatgctgatgagaagggatcgcttaatatgctctgggttcatgccattgagagaggcctaatcacaaagagcgtatacaaagtgatgcaccaagcaagaatgaaatcttcaaatcctgcagtctagaatgcgaggaggggaatgctcatatttcagggatgaacttttcagagactgtgaattgagagtgggctatagaaatagtcttgcactttggtcttttgatgtcgatgatgctcgtgagtcacttaattggttccctctgttggctggcacttaatttactaaatcatagcaattagttagcacaagcagtttctttcttgtaccttccacatgtccctttgcatcattgatttctgctgtctgcaagaggtggcaccttgtgttctctggcttggtaaattcccatctctattccctttcatcctgcccggaacagagtggaggcgtgatgtttgtgatatgtaggtagggcagattgctagtgcttacatttcaatggcctgcctgccatttcttttagttttattggaaggaactctatctttctttatcaccttaattatcaatgcttgcattgcatgtacgcctgtatacatattagttcagttttctatgtctgattgattcttcagcccaccaatcattcaggtttttgtccaatgctattctgctttaaattgatgtttctttttctgaattcacagacaaatcaagctgcaaatttgcaggtgatggggtgcttcaattccaaaccaaacaatgccggtgcgatcagaagaagacatgggagggtagaagtggatgtttgcgcctggattatgagttcctgaggctcagaggagctgcgtcgaggacttggataattttcatggctactcgctactcatgagcactactcctgactaggcccaggaggcgcacgatcactcttcatggttcattcatggcacatctgctaaattgattatcaagaagaataatggcagaggtgatgaactaactgtctgaattcagtgttttttttttcgccgggaaggctgaaggagaccatccgagtatattaagaaggagtaaaagttacaagaaaaacaccacaactgaattcagtgcttgctggactgctgatcttctgcaggctttggaggattatttgcctctgctcttctcagcctagtcaaagatgataacctgatttccccttctttttaattggtctgaatgaaatccaggagatttgtgtcagtcgaggttgaattcttttacagggagcgagttggaagatagtacaattttgcatttatgaacgaagaggatgatgcagaggtccgcgtgcacctatattgttgcatgtggtgtaggacaataggagtgatactgtactgtgtttgatcatctatttgtcttgtgtaccgtcaatgcccagtgcttagaatgagatgctacctgttgtcttggacacgtgacggctatgctgcattcgtccgaagcaatttttgtgcgtcttcctaagacatgtattgagggataccatgctaatataaggtatctgagggtctggagcaatatgtaagcatatgagatacagataattagactctgaaactttgtgtttgtattccatgataagtttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0827900, RefSeq:Os02g0827900