Os02g0830700

From RiceWiki
Revision as of 03:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0830700| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001055149.1 GI:115450025 GeneID:4331246| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0830700

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001055149.1 GI:115450025 GeneID:4331246

Length

5087 bp

Definition

Oryza sativa Japonica Group Os02g0830700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36592574..36597660

Sequence Coding Region

36593242..36593623,36596035..36596119,36596932..36597418

Expression

GEO Profiles:Os02g0830700

Genome Context

<gbrowseImage1> name=NC_008395:36592574..36597660 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36592574..36597660 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccaccccgccatcgccatgcctcttcttcctcttcctcctcttcttcatgtggtcgtctcactctcaccttggcgccgcctccgacgcggacgcgctgctcgccctcaagtccgccctcgaccgctccgaccgcctcccctggcgccgcgacaccgcccccgccttgtgctcctcctggctcggcgtgcgccagtgctcccaacctccccgggacaggagggtcaccaagctcgtcctcgagaacctcaacctcaccggcgtcctcaccgccaccctcctcgccccgctctccgagctgcgcgtcctcagcctcaagtccaacgccctcaccggccccatccccgacgccctccccgccgccctccctaacctcaagctgctctacctctccgccaaccgcctccagggccgcatcccgcccaccctcgccctcctccaccgcgccaccgtcctcgtcctctcctccaacctcctccatggcgctgagggcctacttccaggccaaggaggagcgactcctcgtctacgattactaccccaatggcagcctcttctccctcctccacgggtccagcagccggacgtcgagcaaggggaagcccctgcactggacgtcgtgcatgaagatcgcggaggatgtcgccgccgggctggtgcacctgcaccagtcgccgccggctggcatcgtgcacggcaacctcaagccctccaacgtcctcctcggccccgacttcgaatcgtgcctcaccgattacggtctggtgcccacgctgctcccctcccacgccgatctcgcctcctccacgtccgtcctataccgagcgccggaaactcgcaccgcccatgccttcacgccggcgtccgacgtgtacagcttcggcgtgctcctcctggagctgctcaccgggaaggcgccgttccaggacctgatggagatgcacagcgatga</cdnaseq>

Protein Sequence

<aaseq>MPTPPSPCLFFLFLLFFMWSSHSHLGAASDADALLALKSALDRS DRLPWRRDTAPALCSSWLGVRQCSQPPRDRRVTKLVLENLNLTGVLTATLLAPLSELR VLSLKSNALTGPIPDALPAALPNLKLLYLSANRLQGRIPPTLALLHRATVLVLSSNLL HGAEGLLPGQGGATPRLRLLPQWQPLLPPPRVQQPDVEQGEAPALDVVHEDRGGCRRR AGAPAPVAAGWHRARQPQALQRPPRPRLRIVPHRLRSGAHAAPLPRRSRLLHVRPIPS AGNSHRPCLHAGVRRVQLRRAPPGAAHREGAVPGPDGDAQR</aaseq>

Gene Sequence

<dnaseqindica>4038..4419#1542..1626#243..729#gttagttaagctttcccctcccaattaattaagtttagctcttatcagagcgagagagagagagagagagagagagagggaagaagaagaagtggaagtggtatgtatgtgcccatgtccattgccgcagaaacaaactgtagcagcagcagcagcagctagtgaagtactacagtacagtagtgaggacttaatcaaacggggcgcgcggggtgccccctagctctcctcattccaccaccatgcccaccccgccatcgccatgcctcttcttcctcttcctcctcttcttcatgtggtcgtctcactctcaccttggcgccgcctccgacgcggacgcgctgctcgccctcaagtccgccctcgaccgctccgaccgcctcccctggcgccgcgacaccgcccccgccttgtgctcctcctggctcggcgtgcgccagtgctcccaacctccccgggacaggagggtcaccaagctcgtcctcgagaacctcaacctcaccggcgtcctcaccgccaccctcctcgccccgctctccgagctgcgcgtcctcagcctcaagtccaacgccctcaccggccccatccccgacgccctccccgccgccctccctaacctcaagctgctctacctctccgccaaccgcctccagggccgcatcccgcccaccctcgccctcctccaccgcgccaccgtcctcgtcctctcctccaacctcctccatggcgaaatccccacctccctcaccacgctcccgcggctcacctcgctcctccttgacgacaaccgcctcaacggcatcctccctccgctgccgcagcccacgctccggctgctcaacgtctccgccaaccgcctctccggcgagatcccctccgtcctcgccaccaaattcaacgcatcgtccttcctcgccaatgccgacctctgcggcccaccgctgcgcatccaatgcgccgctccgaccgcgccggcggccgcggccgcattcacgccgctccccccgccacgctccaacaggagccgccgcgcgaagaacgcgggcatcgtggccggcgcgacggtggcgggtgtggtggtactgggaatcctggtggcggcggcggtgatggcgtcgcggcgcgggaggaacaagcgcgtggccggcgacgtggataagggagcaatgccagaggaggaagaagagcagcagcagcagcagccgcaggctcagcctcgggaggagatcaatgcgtcggcgtcggcgtcggcgtcggtggcatcggagaggagggggggtcgtgagttctcgtgggagagggaggggatcgggaagctggtgttctgcggcggcgtggcggagatgtacagcctggaggagctgctgcgggcgtcggcggagacgctggggcgcggggaggtgggcagcacgtacaaggcggtgatggagaccgggttcatcgtcacggtgaagcgcatgcgggagccggcggcgggggcggcggagcttgggcggcgagcggaggagctgggccgcctccgccacccaaacgtggtggcgctgagggcctacttccaggccaaggaggagcgactcctcgtctacgattactaccccaatggcagcctcttctccctcctccacggtaaccttcttcttcttcttcctcccttctcccccaccttaattactactcctaccattattatttgtctttttttttttacgattcattcatccatgttagtactccataattagctctgctatctccttgtactccacaatgcaatgcacacaacaagtgagaaatgggatctacctacctaagtactactagccactggatcactgcattcatgtacactagacaaaatcgctgcctgccaaggccaggatcacaaaacaaaaaaaattacagatcaatggatccatgacgaaccaaagaaacaagacagatatgtttttcatggttgtcatcttttctgtttcctgttggctagctagcttcatcccaaatacttacagttgttcagtcaggatgcatgcttctttcgtgcattgcaattactcccctcccctccctcgctagcagagtaaaaaggacgggctttttcttggctgttgccttgttgcaattccacgcctcgcctcctcctcatgcttcaccataaagtttgggtacatgcgtgctgcctgccttgcccgtccttttatttacaacaagctgctgctgctgctagaaaagaatgccaagccagccatgtgccacggagatccctactgctccacttttaattcatgcaagccccgcctgtatgtagtataggaggagtgagtaatttggagagtaccagcagctagtacttccgtatgttatgtacaacgcaatataactgtgtgccatcccttttctcttctctagtagtaaaaccatttcaagactttgatgggatcatgggaaaatcgtgaagtgaaaaacacttaagattaaaccatcttcatgctaattactactctagtcatggatatatcaccatagaacaaccagattcacttgaatatttctcttgtcttaacatcgtataatatttgactggtgggaggatatgggtgtgaagaacctcattctgtttcagcctttcagaatggaaagcccattgactaaaaattgctccttgttttcaatggaagaaaataaccttccaatatgtgccacatagggtcttgggaacatctcccatgaaaacagggcataattttaggacccggaaaactggtggtaaatgatagagcatatcatatgaaaagttaattatactaactgctctggataataggaacagatagtcagagccaactgtgcatcaacatggctggttccgttcatgtgtcactgagctgcactagttttcatttcttgcaagtaaaaatgcattcctctgtactgctgccattctatccatgcgctgaactttttaccaacttggtattagcagtactgaggcccggtttagttcccaaaacaaaaacttttcacccatcacatcgaatgtttggacacatgtatggagtattaaatgtggacaaaaaaaccaattacatagtttgcgtgtaaattgtgagacaaatcttttaagcctaattacgccatgatttgacaatgtggtgctacagtaaacatttggtaatgatggattaattatgcttaataaattcgtctcgcagtttcttggcggaatctgtaatttggtttgttattagacaacgtttaatacttcaaatgttcaaatgtgtatccatatatccgatgtggcaccccaaaacaaaaatttttgccatctaaacctggcctaatattggtttggttaaagcagtgggtcaatggtcaattggtcactacactctgcattgaaatattccatccaccataatgggcatgcatgcagtcactcattcattcacaagcaaacttaaagcccccagattagttgaggcagtcaaaggccatgctttcatgcacgacagaacagggcctatccctgttcttgtaaagttgtaatgggtggcttgatctgaggcagtagaccccgcagcaccactgtggcttggtctttcctctatttcaggctctcatcaaaatccccttctcacaaggacaacagtatgcagatgtagacaagcaggtaagtgcttgtgagcatgtggtcctgatctgaatctgagctgcagtaaataattgctactagtatacttctgccgttctgcgtatgaacaagagactaggcaatcggacaatgctgcatagcgccatgccctcacacacacagtcacagacaagcgcgggctatgcctgttgaaagttttttttttcctattttgtttggattgttgaaagtttgtttcatggtgcatttgcaatttgcaagccttatctgtgctgtgtacatcctttttaaatgtagagcatgtattttaatccattttgtaggtaaaaagccatgccgtgttaatggaataaagtttaaccaaattcaaatttatgatgcacaatagggtccagcagccggacgtcgagcaaggggaagcccctgcactggacgtcgtgcatgaagatcgcggaggatgtcgccgccgggctggtgcacctgcaccagtcgccgccggctggcatcgtgcacggcaacctcaagccctccaacgtcctcctcggccccgacttcgaatcgtgcctcaccgattacggtctggtgcccacgctgctcccctcccacgccgatctcgcctcctccacgtccgtcctataccgagcgccggaaactcgcaccgcccatgccttcacgccggcgtccgacgtgtacagcttcggcgtgctcctcctggagctgctcaccgggaaggcgccgttccaggacctgatggagatgcacagcgatgacatcccgagctgggtgcgggcagtgcgtgaggaagagacggagtccggcggggagtccgcgtccgctggcggcacggaggagaagctcggtgcgctgatcagcattgcggcggcctgcgtggtggcggacccggcgaggcggccaaccacaccggaggtgctacggatggtgagggaggcaagggcggaggcaatgtcgtcgtcgaacagcagcgaccggtcaccagcgcggtggtcagacgccgtgcaggtgcagatgggcatgggggtgccgcgagatcagggagagctaggaggactcacctgatcgatcgatcagcagctgatctcatcctgatcagcagctgatcatcgcctggctggccggcttgttgttactttacttcatgtaccgtagcagcaaaaaaagtgtagttaccactcaatttgtcttggctcaaagaatgactcattcttcaggcaacactttttaaataccaggggtctttgatttgggacttgtgtaggtttttagcagggaagggtggggcattgggagatactcctagcttagataggttcagagatgaagattctctgggctggatctgtctgtaaatcttttttggattgttgtaaacttgtcctttttattttttccggagtggagctaaactggtttatgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0830700, RefSeq:Os02g0830700