Os02g0833500

From RiceWiki
Revision as of 03:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0833500| Description = Sodium/hydrogen exchanger family protein| Version = NM_001055171.1 GI:115450069 GeneID:4331269| Length = 2983 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0833500

Description

Sodium/hydrogen exchanger family protein

Version

NM_001055171.1 GI:115450069 GeneID:4331269

Length

2983 bp

Definition

Oryza sativa Japonica Group Os02g0833500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36734475..36737457

Sequence Coding Region

36734498..36734665,36734806..36737130

Expression

GEO Profiles:Os02g0833500

Genome Context

<gbrowseImage1> name=NC_008395:36734475..36737457 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36734475..36737457 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaggtgacggtgccaagtgctccgacgaggtgaacgacggcacctacttcatggccggcgtgatggccgtgaccggcctcatggcgaccgtcctggcgctctccggcatcttccattgcgcgcttcgacgcgttgggcagccaagcataatctcgcacatcctggccggcgtggtggtcgggccgacggtgctcggccgcgccgtggacctgcgtcctctgggcatgcaggacgccggcagcgcgctcagcgacaccatctacttcgtccgcatcatcttcatgttcttcatcggcctggagatggacctccggtacctccgccaccacctgcgccgctccctcgccatcgcctgcggcggctcggggctctgcctcctgctcgccgccctcgcggggcccttcttctacggcctcctccaccccggccagggccccttcaagcccgagaagctctacgcctccaccgcgctcttcatgctcgtcctcaccaccaccgcctccccggtcctcatccgcatcgtcaccgagctcaagctcaccggctccgaggccggccagctcgccatcggcgccgccttcgccaacgacatggctagcctctccgtcttcagcatcatggtcgtcggcaccaccgcctacggccccgacggccagcccaccccatccttcccggacatgtccatcgtcatgtccatggccttcacggcgtgcctggcggtgctcgcggccgccagggccgccaggctgctcaacaggctcaagcgcggccgccgctacgtcagcaagtacgagctctgcgccatgctcctgctcatcatcgccctctcgctgctcgagcaggtgttcggctacagcgcctccatgaccgccttcctcatcggcctcgccatgccgcgcgacgggcccacggcgcgcacgctcgtcgaccgcctcacctatcccgtgcaccagctcgtcatgccgctctgcttcggggccatcggcgcaaggctcgacttcgccgccgtcggcagcttcacagccatgcagttcgccgtcgccgtcgccttcacgacgctgctcggcgcagtcgggaaggtgggcggcacggtgctcgcgggccgcatgctgggcatctcggcgagggagtcgctggtgctgggcttcctgctcaacgtcaagggctactgtgacatcctcgccatcaacttcggcaaccaggccggcatctggggccagacggcgcaggtggtgctgctcctctcctccatcctcaacaccttcatggcaggcccggctgccgcggccatcgtccgacagcagcgcgccgcctcccgataccggtcgcgctgccttcaggacctcaaggtcgaccacgagctccgcgtgctggtctgcgtccacggcgccgggggcgtccacaccatgctgacgctcgcggagctttccaagggcaccgcgccgctggccgtctacctcctccacctggtggagcttatggccgcgcgcaagtacgccatcacccatctgtaccatgacgccgacgccgacgacgacgagtggggttatgcccgcgagatcgagcaggtggccgcggcggtgaacaccttcacctacgacgccggcgtgccggtgcggcagatgaccgccatctccagcctggggtccatggacgcagacgtgcgcaacggcgtggaggactcgcgcgcgtcgctggtgatcgtgcccttccacaaggagcagcggtacgacgggcgcatggtgtgccggcgagaggggaggcggcagctgaaccagcggatcctgcagcgcttgccctgcactgtcggggtcctggtggaacggcgcctcggcgggggcggcgacaagggcgcggaagacgtggtgaagaaccaggtggtggcggtgttcctgggcgggccggacgacagggaggcggtagcgtacgcgacgcggctggcggcgcacccgtgggtgagcgtgacggtggtgagattccttccagcgcgacaggatgatattaccattggcattgatgaacaattattagccaccaccaagagccatggcggtgagggcgccatggaggtggcggtggaggacgaggaggcgatggcggatgaggagttcatggcggacgtgtacgcgaggctggtgttggcgggacaggtggagtacacggagaggtacgtgagcaacggcgcggagatggtgaattcgttgagcgccatggtggggacgtactcgctgttcgtggtggggaagggcggcggcggctcggcggcggcggccatgacgagcggcatgggagggctactggaggacgagtgtccggagctgggccccgtcggggaggtgctggcctccgacgacttcacggcctgcggctccgtgctggtgcttcagcagcacagcgcgcatgtgcatcgcaggatgaggaggtggaatcccaacattcacatcaccaccacaccctcgtcgtccgatcatcatagccacccaccctag</cdnaseq>

Protein Sequence

<aaseq>MAGDGAKCSDEVNDGTYFMAGVMAVTGLMATVLALSGIFHCALR RVGQPSIISHILAGVVVGPTVLGRAVDLRPLGMQDAGSALSDTIYFVRIIFMFFIGLE MDLRYLRHHLRRSLAIACGGSGLCLLLAALAGPFFYGLLHPGQGPFKPEKLYASTALF MLVLTTTASPVLIRIVTELKLTGSEAGQLAIGAAFANDMASLSVFSIMVVGTTAYGPD GQPTPSFPDMSIVMSMAFTACLAVLAAARAARLLNRLKRGRRYVSKYELCAMLLLIIA LSLLEQVFGYSASMTAFLIGLAMPRDGPTARTLVDRLTYPVHQLVMPLCFGAIGARLD FAAVGSFTAMQFAVAVAFTTLLGAVGKVGGTVLAGRMLGISARESLVLGFLLNVKGYC DILAINFGNQAGIWGQTAQVVLLLSSILNTFMAGPAAAAIVRQQRAASRYRSRCLQDL KVDHELRVLVCVHGAGGVHTMLTLAELSKGTAPLAVYLLHLVELMAARKYAITHLYHD ADADDDEWGYAREIEQVAAAVNTFTYDAGVPVRQMTAISSLGSMDADVRNGVEDSRAS LVIVPFHKEQRYDGRMVCRREGRRQLNQRILQRLPCTVGVLVERRLGGGGDKGAEDVV KNQVVAVFLGGPDDREAVAYATRLAAHPWVSVTVVRFLPARQDDITIGIDEQLLATTK SHGGEGAMEVAVEDEEAMADEEFMADVYARLVLAGQVEYTERYVSNGAEMVNSLSAMV GTYSLFVVGKGGGGSAAAAMTSGMGGLLEDECPELGPVGEVLASDDFTACGSVLVLQQ HSAHVHRRMRRWNPNIHITTTPSSSDHHSHPP</aaseq>

Gene Sequence

<dnaseqindica>24..191#332..2656#ggtccggcgggccggcgacgagcatggcaggtgacggtgccaagtgctccgacgaggtgaacgacggcacctacttcatggccggcgtgatggccgtgaccggcctcatggcgaccgtcctggcgctctccggcatcttccattgcgcgcttcgacgcgttgggcagccaagcataatctcgcacatcctggtatatatatatatatatgcatgcggattggattggattgataattaaatttccagcagagagagagagagagatcgagatggaagctatatatatatatatatatatatatatatgagattgcgagcatggcagtgcaggccggcgtggtggtcgggccgacggtgctcggccgcgccgtggacctgcgtcctctgggcatgcaggacgccggcagcgcgctcagcgacaccatctacttcgtccgcatcatcttcatgttcttcatcggcctggagatggacctccggtacctccgccaccacctgcgccgctccctcgccatcgcctgcggcggctcggggctctgcctcctgctcgccgccctcgcggggcccttcttctacggcctcctccaccccggccagggccccttcaagcccgagaagctctacgcctccaccgcgctcttcatgctcgtcctcaccaccaccgcctccccggtcctcatccgcatcgtcaccgagctcaagctcaccggctccgaggccggccagctcgccatcggcgccgccttcgccaacgacatggctagcctctccgtcttcagcatcatggtcgtcggcaccaccgcctacggccccgacggccagcccaccccatccttcccggacatgtccatcgtcatgtccatggccttcacggcgtgcctggcggtgctcgcggccgccagggccgccaggctgctcaacaggctcaagcgcggccgccgctacgtcagcaagtacgagctctgcgccatgctcctgctcatcatcgccctctcgctgctcgagcaggtgttcggctacagcgcctccatgaccgccttcctcatcggcctcgccatgccgcgcgacgggcccacggcgcgcacgctcgtcgaccgcctcacctatcccgtgcaccagctcgtcatgccgctctgcttcggggccatcggcgcaaggctcgacttcgccgccgtcggcagcttcacagccatgcagttcgccgtcgccgtcgccttcacgacgctgctcggcgcagtcgggaaggtgggcggcacggtgctcgcgggccgcatgctgggcatctcggcgagggagtcgctggtgctgggcttcctgctcaacgtcaagggctactgtgacatcctcgccatcaacttcggcaaccaggccggcatctggggccagacggcgcaggtggtgctgctcctctcctccatcctcaacaccttcatggcaggcccggctgccgcggccatcgtccgacagcagcgcgccgcctcccgataccggtcgcgctgccttcaggacctcaaggtcgaccacgagctccgcgtgctggtctgcgtccacggcgccgggggcgtccacaccatgctgacgctcgcggagctttccaagggcaccgcgccgctggccgtctacctcctccacctggtggagcttatggccgcgcgcaagtacgccatcacccatctgtaccatgacgccgacgccgacgacgacgagtggggttatgcccgcgagatcgagcaggtggccgcggcggtgaacaccttcacctacgacgccggcgtgccggtgcggcagatgaccgccatctccagcctggggtccatggacgcagacgtgcgcaacggcgtggaggactcgcgcgcgtcgctggtgatcgtgcccttccacaaggagcagcggtacgacgggcgcatggtgtgccggcgagaggggaggcggcagctgaaccagcggatcctgcagcgcttgccctgcactgtcggggtcctggtggaacggcgcctcggcgggggcggcgacaagggcgcggaagacgtggtgaagaaccaggtggtggcggtgttcctgggcgggccggacgacagggaggcggtagcgtacgcgacgcggctggcggcgcacccgtgggtgagcgtgacggtggtgagattccttccagcgcgacaggatgatattaccattggcattgatgaacaattattagccaccaccaagagccatggcggtgagggcgccatggaggtggcggtggaggacgaggaggcgatggcggatgaggagttcatggcggacgtgtacgcgaggctggtgttggcgggacaggtggagtacacggagaggtacgtgagcaacggcgcggagatggtgaattcgttgagcgccatggtggggacgtactcgctgttcgtggtggggaagggcggcggcggctcggcggcggcggccatgacgagcggcatgggagggctactggaggacgagtgtccggagctgggccccgtcggggaggtgctggcctccgacgacttcacggcctgcggctccgtgctggtgcttcagcagcacagcgcgcatgtgcatcgcaggatgaggaggtggaatcccaacattcacatcaccaccacaccctcgtcgtccgatcatcatagccacccaccctagctatatactacttcatctccgacgacaacatcatccatggcgccatgcatagaacaaattaattaagaggagtacgtgtggcacgcaatggctagctggttggactggatcgacctagctagaacggggccgggttgacattgcaccgatcgatcgatcgatgatctgcatctaattgccatgggaaattcagttggttttagggtaaaaatcatatgcacccgtgtcacgcatatacgccatgaccccatgtgtggggatagatgagtgagtatatgtaccgatcgaaataaacagactcgattttgaggttggaatgtttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0833500, RefSeq:Os02g0833500