Os02g0834000

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Revision as of 03:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0834000| Description = Similar to Rop4 small GTP binding protein| Version = NM_001055174.1 GI:115450075 GeneID:4331272| Length = 4778 bp| ...")
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Gene Name

Os02g0834000

Description

Similar to Rop4 small GTP binding protein

Version

NM_001055174.1 GI:115450075 GeneID:4331272

Length

4778 bp

Definition

Oryza sativa Japonica Group Os02g0834000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36767756..36772533

Sequence Coding Region

36767848..36767946,36768615..36768702,36768812..36768913,36769018..36769083,36771278..36771342
,36771429..36771494,36772012..36772113

Expression

GEO Profiles:Os02g0834000

Genome Context

<gbrowseImage1> name=NC_008395:36767756..36772533 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36767756..36772533 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgcgtctcggttcatcaagtgcgtcaccgtgggggacggcgccgtgggcaagacctgcatgctcatctcctacacctccaacaccttccccacggactatgttccaactgtttttgataacttcagtgcaaatgttgtggtcgatgggagcactgtgaacttggggttgtgggatacagcagaggactacaataggctacgcccgttgagctatcgtggcgctgatgttttcctgctggccttttctctgatcagcaaagcaagctatgagaatgtttctaaaaagtggatacctgaattaaggcattatgctcctggtgtgccaataattctcgttggaacaaagcttgatctgcgggatgataagcaatttttcgtagatcaccctggtgctgtacctatttccactgctcagggcgaagagctgaggaaactcattggtgcagcggcatacattgaatgcagttcaaaaacacagcaaaacatcaaggcagttttcgatgctgcgattaaggtggttctccagcctccaaagcaaaagaagaagaagaaaaaggcgcagaaaggatgtgccatcttgtaa</cdnaseq>

Protein Sequence

<aaseq>MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS ANVVVDGSTVNLGLWDTAEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPEL RHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKT QQNIKAVFDAAIKVVLQPPKQKKKKKKAQKGCAIL</aaseq>

Gene Sequence

<dnaseqindica>93..191#860..947#1057..1158#1263..1328#3523..3587#3674..3739#4257..4358#gaggtccgtggcgttggagtgaggactgaggaggaagaagagggcgggatctagggtaccggatgcgctggctgtgctgagtgagagtagagatgagcgcgtctcggttcatcaagtgcgtcaccgtgggggacggcgccgtgggcaagacctgcatgctcatctcctacacctccaacaccttccccacggtaggcaatccgttctttccccccttcttcttctcgatccttcctgcccgcccgagtatgcatctgatcgactccatggtaaacattctttttcttgtcttgggactggggactggggactgggtgtagagaagacatagatcagctttccttccctttttgcttgctaaaatttggggactgatgattatgataacgttattcttctatacgcgtccttctctctgcgggatccaggtgccttcttctccaggtataggaattaggatagtattgccgatttctcagctgccaacattcactccttatacagatctaaatatacactctttagcttcacctccagattttgttgtattactatcaggagtaaataataaactcataaatatatgttgcggtatgtctgactttttgtctgctattactaaccgtggctccatcattccgtagctaatcgccaccattgacctctagacgtttctctttgttggtgaatttgttttagctctgtatcattctaaccgtgacctctgtcaatcaccgtcagtaactcagctaccccttttcgttttgtgcgaaaaaataaatctaatgtattgcatctttgcatttttaattggcagactgtatgtttaatgggacatttcttcatctctatgttacaggactatgttccaactgtttttgataacttcagtgcaaatgttgtggtcgatgggagcactgtgaacttggggttgtgggatacagcaggttctactttcccctccttttaatggatgcatgcgtaaacctccttatatacatccacctttcacggtcatcaaaataaataaaaatttgacaaatttaacaggacaagaggactacaataggctacgcccgttgagctatcgtggcgctgatgttttcctgctggccttttctctgatcagcaaagcaagctatgagaatgtttctaaaaaggcaataaaatcttgccgcccactttctttgctctctctccatgaagtaccttagcttagtcaacctgttatcttgcactgacacatatatatttctgttgtcagtggatacctgaattaaggcattatgctcctggtgtgccaataattctcgttggaacaaagcttggtatgcccttccaactcttgttgcatagcatttgtgcaaagcatcacatatctgtagaattaagctattatattttcactcccacttaccagcagcttggcgttgcacttaactgagtggtgattgctgtcttcctataaattgtctcatcatttgagtgcttgtgtgctgtgaacactctatgaaagcatgtttgtatatgtaaattcaattttactgttattcacagcaaagccatatgcttatgatatctgaaaatcatatttaaatgtaaaatatttgcatgtggaaatctatgtgaacatggtttcatggaagacaagatatttgaattcgacgatagcatgattgctgcccagcagtgttttgactgaatatatggcattataccttgaaacatgttacctgtaacacatgaagtgttatatgctatcaggggacatttgtagatgcttggtgacctggtgtccctcaggattgcaggacatgcattatatcaagaatgtttgttttttggtgggtgacatccttagactaacgctgaatgtttttttttttcaaatttagattttgtggggaatcggtagctaagagtctcttattccactatgggtggcatagttccattagaattgctggataaaaaatctatgtggtttaatgctagtcaataataaaggagagttaagggtttgtccagggccgtctccaggaattgggggccccggagcgaaatataatttgagatcctaaatttacttttgattcggtccttaatttaaattcgtaattatattcatggtaatttgatttgaaaagaagagtactgaaatattcaattgatcattacatgcatgcaattcaacaattgagtatcaacaattcagtattagaaactctaatatgatagacgaggtagtcggccagctgctctgggcatcgtaaccattgatcaaggattcagaagctggttcgcatgcatgcacatgaacacacacatgacatcagttgtatatgctaaggctggctggttgtactggtctctctgatttgggggccccaaatttttgtggggccctgcgctgacgctccgttggcacgccctcgttgacgggcctgggtttgtcccatcaccttatggctcattttcctgttttgaacaaacttatggctgtcttatggtagaaagctggagatgtaaatcatttccattatctaagaatgtttgaaattaatgctttctttttttgcttgattgttaaccattacctcagcaacatttcacatgctatgacagttgagtatcatagctagtttgagagacaaatgagcatgcaatggttttgtttgtatttcattgagaccttgacgatcctgccctgcaaatgggtctttactagtctccaaagttaagcctgtgacctatactccagttggtcctgtacatatcacttattgatttatgatcaagaaaagaaaattcctctgaaatatattttgtcttgttccttcagcaaatgctaaatgttgataaatctgcatttctagttttcatgctaagttgctaataaaaaggcacatatgacccgatccaataccttacactgcatgattgaataccatgagaattccattctgttgatctcacaaggcaggtgggcttttaggattgtcccctgggaacacatcctctgtaggctatttattcacggtttcatactgcatgctcagttaaaatggcatctagcgaacatttgaaaggctcaaaatggatgttcaccattgaatttctgctccagcggagcaagttataaatagataaagcctgtacagctaacagcaagttataaatagataaagcctgtacagctaacagccttgtcaacttactggccttagaggcaagttaggtggttagagacttagtcctcactgaccaaaatgggctcttgttagattatgttcttaagttggattactggagttagaaatcaggttcgatgtagcagctttggtggtgcaagttgtactttgctcctgatacaatcatacacaatatagttttcagaaacatgtcctagcctcagcatgtaaatgcaatattcttttgcttttctgttcattgtgcttttattaatcacttgcgtacttgatgtaatccggcggtgcttaaccattaagttactgttaatagatctgcgggatgataagcaatttttcgtagatcaccctggtgctgtacctatttccactgctcaggtattcaaagcttagtttgcttgtatttttgttgcttcccagcattgttacacaagtcattaaaattattttgctaatcaatgtagggcgaagagctgaggaaactcattggtgcagcggcatacattgaatgcagttcaaaaacacagcaagtactacattttattcttcttttttgaaaaagggttcattttactccctcaaattattttgccaaagggcctaggtttttatggttcaccccttaaactagtaaaagggactctactccctaataccatttcacttttttattctccacatacggcaacaggacctgtgtttacagttttttcatgacaattgacatgcggttttaaatctccatgtttaatcagtgttaggtgcttgcaacttgtgcaaacagtgatcttttaaatatataaaaaggttgagacatatggtgtaatacgatttatcatcccacaaacttaacatacaacttttataaagagaaacaaaaaatagtgagcccaaatatagttgaggggtttgattgctgatccggtgatttttgaatcaatgctgatccggtgatatagttgaagggagtaaaatggacttgttgcgttgagctccattgcggtggcatggttactgattgctgctgctttgcctttgcaactgcagaacatcaaggcagttttcgatgctgcgattaaggtggttctccagcctccaaagcaaaagaagaagaagaaaaaggcgcagaaaggatgtgccatcttgtaattaaatggtagacagtgcagtgcagatcgatgtatcccttcatttgtagcctctggcttcaatcgtcgcttgtttgtataattacgctagatgccaccggcagaagatataatatagtcctcctgcctttgtggtgttggtctctaaggtcgtccagactccagagtccagacgcatttggtttcttttgttctatctataatcaatctatctatatctgctagtgttgtgcttctgctagttatgcggatgagaaagggaatttaccttccctgtttctgggcttctggcttgcacgggaaaggtcggtttgtttgcaatatactactaccactccagcttgctaggttgattaaaataagctaccagtaagaatcgatatgacgtatcagcattttattaaatcagtgattaatttta</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0834000, RefSeq:Os02g0834000