Os03g0100500

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Gene Name

Os03g0100500

Description

Similar to TAR RNA loop binding protein (TAR (HIV) RNA binding protein 1)

Version

NM_001055181.1 GI:115450090 GeneID:4331280

Length

1406 bp

Definition

Oryza sativa Japonica Group Os03g0100500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:62468..63873

Sequence Coding Region

62468..62582,62830..62981,63056..63126,63214..63370,63520..63687

Expression

GEO Profiles:Os03g0100500

Genome Context

<gbrowseImage1> name=NC_008396:62468..63873 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:62468..63873 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caagatgtgctcaattttcagaagaaaatcacaccctataggaactttgatcaaccattaaacgttggtggtcattcagttgttggcgatgactatatttcaagattacttttagatctagagggagatgaccagcagttggatttagcgctagaatcaagaaatcacgctgtggaaactatcaagcaaagccagcagcaattaatagtagtagcatcattggtagatcgcatccctaatcttgctggactgacaagaacatgcgagatattcaaagcagttggattggccgttgctgacaaaagtattatcgaggacaagcagtttcggttgatcagtgtgacggcggagaagtggttgcccatgatggaggttccagtgaatagcgtcaaagtgttcttggagaagaagaggctggaaggctattccgtgatagggttggagcagacggccaacagcaagccactggaccacttctcttttccgagcaaaacggtgcttgtgctgggacgggagaaggaaggcatcccggtggatatcatccatgtgttggacgcatgcgtggagatcccgcagctgggcatcgtcaggtcactcaatgttcatgtcagcggtgccattgccgtgtgggaatacacccgccagcaacgcatcgcaacttaa</cdnaseq>

Protein Sequence

<aaseq>QDVLNFQKKITPYRNFDQPLNVGGHSVVGDDYISRLLLDLEGDD QQLDLALESRNHAVETIKQSQQQLIVVASLVDRIPNLAGLTRTCEIFKAVGLAVADKS IIEDKQFRLISVTAEKWLPMMEVPVNSVKVFLEKKRLEGYSVIGLEQTANSKPLDHFS FPSKTVLVLGREKEGIPVDIIHVLDACVEIPQLGIVRSLNVHVSGAIAVWEYTRQQRI AT</aaseq>

Gene Sequence

<dnaseqindica>1..115#363..514#589..659#747..903#1053..1220#caagatgtgctcaattttcagaagaaaatcacaccctataggaactttgatcaaccattaaacgttggtggtcattcagttgttggcgatgactatatttcaagattacttttaggtatgtaaagcatccttgcaattttactattactcctttcttcacattccctcccaaaatagcttgcaagatggatttgcacaggcttgttactttcattgcgcttggtgtgctaagtttttatgtaatactaagtcattttgaagagctaagctgcggatgctcttattatctacaaactgagcttttgtttttgctccctacgctatttcacttgtccatgtgctgtcttgtttgctgggtgcagatctagagggagatgaccagcagttggatttagcgctagaatcaagaaatcacgctgtggaaactatcaagcaaagccagcagcaattaatagtagtagcatcattggtagatcgcatccctaatcttgctggactgacaagaacatgcgaggtatatatcggtataattcctgttattatccctgaaacgtgcatgatataatggtattaggtttttggtgacagatattcaaagcagttggattggccgttgctgacaaaagtattatcgaggacaagcagtttcggttgatcaggtatgtatatggctggcagatgtatataggtgatgatgatttatttgtgtttctctgacttggcatgcaaatatgcaatgcatgcagtgtgacggcggagaagtggttgcccatgatggaggttccagtgaatagcgtcaaagtgttcttggagaagaagaggctggaaggctattccgtgatagggttggagcagacggccaacagcaagccactggaccacttctcttttccgagcaaaacggtatataattagaagatccaaatccccccctctctctctctctctctctctctctgtgtgtatgtgttatgtttgcattactgcacataggaggagggaaaaaatcatacaaaaaaagaactaacaaggaaaatatatttattgacaaggtgcttgtgctgggacgggagaaggaaggcatcccggtggatatcatccatgtgttggacgcatgcgtggagatcccgcagctgggcatcgtcaggtcactcaatgttcatgtcagcggtgccattgccgtgtgggaatacacccgccagcaacgcatcgcaacttaatttctgtttgagcagaaatcaacttaattttctcaaagctgttccttgttactagtactcctactccatagtggagtctgtattatatgtattcatcaatcggttagaactagaaacaaatgagagatgatagtactccacttgtcttgcccgtacatacagcacaactctactgtcctgacctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0100500, RefSeq:Os03g0100500