Os03g0107900

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Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0107900| Description = Exostosin-like family protein| Version = NM_001055232.1 GI:115450192 GeneID:4331334| Length = 2710 bp| Definition =...")
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Gene Name

Os03g0107900

Description

Exostosin-like family protein

Version

NM_001055232.1 GI:115450192 GeneID:4331334

Length

2710 bp

Definition

Oryza sativa Japonica Group Os03g0107900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:457624..460333

Sequence Coding Region

457624..458193,458736..458980,459395..459863

Expression

GEO Profiles:Os03g0107900

Genome Context

<gbrowseImage1> name=NC_008396:457624..460333 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:457624..460333 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgagaggagatcccaagcagcggagagcttcagcttcagctccccacggcggcgccgcccaccacgtcgccgacaagctcaggaggcactccaccttcctcctcctcctcctcctcctctggttcgccctctccctctacctcttcctctccgccaccccgccgcccccacgccccgccttcctcccttccacttccaccccccgccccgccctccggatctacgtctacgacctccccgcccgcttcaaccgccactgggtcgccgccgacgcgcgctgcgccacccacctcttcgccgccgaggtcgcgctgcacgaggcgctgctggcctacgctggccgcgccgcgcgtcccgacgacgccaccctcttcttcgtccccgtctacgtctcctgcaacttctccaccgacaacggcttcccctcgctctcgcacgcccgcgccctgctcgccgacgcggtcgacctcgtccgggcccagatgccctactggaaccgctccgccggcgcggaccacgtgttcgtcgcgtcgcacgacttcggcgcctgcttccatcccatggaggacgtagctattgcggatggcataccggaattcctcaagaggtcaatcctgctacaaacgttcggcgtacagggcactcatgtgtgccaggaggcggatcatgtggtaatcccgcctcatgtgcctccggaggtggccctcgagctacctgagccagagaaggcacaaagggatatttttgccttcttccggggcaagatggaggtccaccccaagaacattagtgggcgcttctacagcaagaaagtgaggactgagctgctacaaaagtacggaaggaatcgcaagttctaccttaagcgaaagcggtatggtaactatcgatcagagatggctcgctccttgttctgcctctgcccactaggatgggctccatggagcccacggctcgtggagtcggttctccttggctgcattcctgtcataattgccgatgatatacgcctgccgttcccttctgtactacagtggttagacatctcgttgcaagtggctgagaaggatgttgcaagtcttgagatggtgctagaccatgttgtagcgaccaacttaactgtaatacagaagaacttgtgggaccctgtgaagcggaaagcactggtttttaaccgtccgatggaagaaggagatgccacatggcaagtgctgagggagcttgagattttgctagaccgttctcaaaggaggcatgttgaatcatggaagaggtga</cdnaseq>

Protein Sequence

<aaseq>MAMRGDPKQRRASASAPHGGAAHHVADKLRRHSTFLLLLLLLWF ALSLYLFLSATPPPPRPAFLPSTSTPRPALRIYVYDLPARFNRHWVAADARCATHLFA AEVALHEALLAYAGRAARPDDATLFFVPVYVSCNFSTDNGFPSLSHARALLADAVDLV RAQMPYWNRSAGADHVFVASHDFGACFHPMEDVAIADGIPEFLKRSILLQTFGVQGTH VCQEADHVVIPPHVPPEVALELPEPEKAQRDIFAFFRGKMEVHPKNISGRFYSKKVRT ELLQKYGRNRKFYLKRKRYGNYRSEMARSLFCLCPLGWAPWSPRLVESVLLGCIPVII ADDIRLPFPSVLQWLDISLQVAEKDVASLEMVLDHVVATNLTVIQKNLWDPVKRKALV FNRPMEEGDATWQVLRELEILLDRSQRRHVESWKR</aaseq>

Gene Sequence

<dnaseqindica>1..570#1113..1357#1772..2240#atggccatgagaggagatcccaagcagcggagagcttcagcttcagctccccacggcggcgccgcccaccacgtcgccgacaagctcaggaggcactccaccttcctcctcctcctcctcctcctctggttcgccctctccctctacctcttcctctccgccaccccgccgcccccacgccccgccttcctcccttccacttccaccccccgccccgccctccggatctacgtctacgacctccccgcccgcttcaaccgccactgggtcgccgccgacgcgcgctgcgccacccacctcttcgccgccgaggtcgcgctgcacgaggcgctgctggcctacgctggccgcgccgcgcgtcccgacgacgccaccctcttcttcgtccccgtctacgtctcctgcaacttctccaccgacaacggcttcccctcgctctcgcacgcccgcgccctgctcgccgacgcggtcgacctcgtccgggcccagatgccctactggaaccgctccgccggcgcggaccacgtgttcgtcgcgtcgcacgacttcggcgcctgcttccatcccatggtcagcttcgatctcttctccactggttgcgtctgcgttaggcggactacttactagatgatgcatgatatttcttgagcttgtaagatgcaagttgcttgcttgcttcttgttgctatctatctaaatggcataggagctgttcgtgataatccactttgaattaggggtcaatgccaagtccaacctagctctagggcaagtaatccagttctttgatcccaaattcaggccaattgaagattcataggcatcggctcttgccctaattgagcttggccgaacatatttctcaccccaagcatcaaaattcctcttttgctgtcaatggagcttagttcgttgggattgaattcaacacagaagttcaccatccattgcattgcatgcctaagaatcaactatgcaaagtcttcgtctatgttctcacttgtcgcaactcacaatgcaacttagttgtttcagaattcacagttttgctgatcgccttctgattcaacgaaaacacccccaccaaatgaaatttcaatctatttgatcaggaggacgtagctattgcggatggcataccggaattcctcaagaggtcaatcctgctacaaacgttcggcgtacagggcactcatgtgtgccaggaggcggatcatgtggtaatcccgcctcatgtgcctccggaggtggccctcgagctacctgagccagagaaggcacaaagggatatttttgccttcttccggggcaagatggaggtccaccccaagaacattagtgggcgcttctacagcaagtaagcatatactgcaaaccctcatttcggttgcttcatctagcaattatcccaaatgggctagcaaggagatcgttttttgtttgtgtgttcctcaggttctgtctcactttagttgtgtcttctaaaaactccgatcgcatgttgctgattttagacttctagatctgttcataacaatatagctcaaaagcagtcagtactacacagggctaataataaatatcatggttctgcaatataaaatgttatttctttaactggttggcaaaattcaaagacaaaccttaggttgaggtatcatccataaccactatagtttcatcagttccacatatggatagctgaatcctgaacagaaaatcaaacttcattaggtcacagttactagctcttaccttttacattcaacaggaaagtgaggactgagctgctacaaaagtacggaaggaatcgcaagttctaccttaagcgaaagcggtatggtaactatcgatcagagatggctcgctccttgttctgcctctgcccactaggatgggctccatggagcccacggctcgtggagtcggttctccttggctgcattcctgtcataattgccgatgatatacgcctgccgttcccttctgtactacagtggttagacatctcgttgcaagtggctgagaaggatgttgcaagtcttgagatggtgctagaccatgttgtagcgaccaacttaactgtaatacagaagaacttgtgggaccctgtgaagcggaaagcactggtttttaaccgtccgatggaagaaggagatgccacatggcaagtgctgagggagcttgagattttgctagaccgttctcaaaggaggcatgttgaatcatggaagaggtgaagaccacagaggggagggatctttccctacttgctgaaatgtggcatgtgatcagtcgcagctgtgacaacaatgacgtgcagcttgcacatgccactcaactgacaaaacaaatcaatatttgatcgacaccatccatagcaaggaccttctccatgagaaattcagaatgccagtttctcacattcaatcatattcttgaatggtgaactgtgtagttggcaattgactaagtaatttgaatgtgcaatcagagaagcgcattctaggctaacaagttggcgagctctgtgcagggaattagtttattctttattattgggagaaatgtgaatctcctttttttttcttgagagagagagagattaaaattgtgttatagaacgatgatctgtgaaggtcttcggatatgtttgcaatgttgtactattgtatacccaattcttttaaaacagaaaggtgttcttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0107900, RefSeq:Os03g0107900