Os03g0108300

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0108300| Description = Similar to Cellulase (EC 3.2.1.4)| Version = NM_001055234.1 GI:115450196 GeneID:4331336| Length = 1279 bp| Definiti...")
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Gene Name

Os03g0108300

Description

Similar to Cellulase (EC 3.2.1.4)

Version

NM_001055234.1 GI:115450196 GeneID:4331336

Length

1279 bp

Definition

Oryza sativa Japonica Group Os03g0108300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:471162..472440

Sequence Coding Region

471340..471921,472015..472365

Expression

GEO Profiles:Os03g0108300

Genome Context

<gbrowseImage1> name=NC_008396:471162..472440 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:471162..472440 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagaagccaccagcagttgctgctaataataatcagctgctgctgatgatgataatggtggtggtggcgtgcagtaattatatgattagtggcgcaggagcgcagccatcgccgggatactacccgagcaagacgatccgatcgatggcgttcggcgaagggtacgacaacctgtggggcgggcagcaccagacgctgtcggcggaccagacggcgctgacggtgtggatggaccggagctccggcagcggcttcaagtccaagcgctcctaccgcaacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacaccgccttctacctgtcgaacaacgagctgtacccggggcagcacgacgagatcgacatagagctgctggggacggtgccgggggagccgtggacgctgcagacgaacgtgtacgtgcacggcaccggcgacggcgccatcatcgggagggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccccgaccacatcgtcttcctcgtcgacgacgtccccgtccgccgttacccgcgcgccgccggcaacacattccccgaccgccagatgtgggcctacggctccatctgggacgcctccgactgggccaccgacggcggccgctacaagtccgactaccgctaccagcccttcgtctcgcgctaccgagacctcaagatcgccggctgcgaggccgccgcgccggcgagctgccagcccgtgccggcgtcgccgtcgggcgccaccggcgagctcagcgcgcagcagaaggcggccatgaggtgggcgcagcagaggtccatggtctactactactgccaggactactccaggaatcacgccaactaccccgagtgctag</cdnaseq>

Protein Sequence

<aaseq>MEQKPPAVAANNNQLLLMMIMVVVACSNYMISGAGAQPSPGYYP SKTIRSMAFGEGYDNLWGGQHQTLSADQTALTVWMDRSSGSGFKSKRSYRNGYFGASI KVPSGYTAGVNTAFYLSNNELYPGQHDEIDIELLGTVPGEPWTLQTNVYVHGTGDGAI IGREMRFHLWFDPTADFHHYAILWNPDHIVFLVDDVPVRRYPRAAGNTFPDRQMWAYG SIWDASDWATDGGRYKSDYRYQPFVSRYRDLKIAGCEAAAPASCQPVPASPSGATGEL SAQQKAAMRWAQQRSMVYYYCQDYSRNHANYPEC</aaseq>

Gene Sequence

<dnaseqindica>520..1101#76..426#agaccagcaggagctagtcagtagaagaagagacattatttgtaggcagcagctagaaattaaggacgattatcgatggagcagaagccaccagcagttgctgctaataataatcagctgctgctgatgatgataatggtggtggtggcgtgcagtaattatatgattagtggcgcaggagcgcagccatcgccgggatactacccgagcaagacgatccgatcgatggcgttcggcgaagggtacgacaacctgtggggcgggcagcaccagacgctgtcggcggaccagacggcgctgacggtgtggatggaccggagctccggcagcggcttcaagtccaagcgctcctaccgcaacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacaccgccttctacgtaagatattgtcttctcgatcgtattgccggcggccggcggcccgccattgctagctgtgaattcatgaagctacttatcatatatgtgtagctgtcgaacaacgagctgtacccggggcagcacgacgagatcgacatagagctgctggggacggtgccgggggagccgtggacgctgcagacgaacgtgtacgtgcacggcaccggcgacggcgccatcatcgggagggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccccgaccacatcgtcttcctcgtcgacgacgtccccgtccgccgttacccgcgcgccgccggcaacacattccccgaccgccagatgtgggcctacggctccatctgggacgcctccgactgggccaccgacggcggccgctacaagtccgactaccgctaccagcccttcgtctcgcgctaccgagacctcaagatcgccggctgcgaggccgccgcgccggcgagctgccagcccgtgccggcgtcgccgtcgggcgccaccggcgagctcagcgcgcagcagaaggcggccatgaggtgggcgcagcagaggtccatggtctactactactgccaggactactccaggaatcacgccaactaccccgagtgctagtggttgagccatgcatcttcagtttcacatcgtttcatgtgttgtgtgcaccacgtagtacgagcaccaacacgtatctactattaccctcatcataattattgtgtacgattggattgaggtgtgcagctgtgtcacccaaaatttcacttcgacctgcaatgcaagcatgtgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0108300, RefSeq:Os03g0108300