Os03g0108200

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0108200| Description = WD40-like domain containing protein| Version = NM_001186302.1 GI:297721734 GeneID:9271783| Length = 3952 bp| Defini...")
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Gene Name

Os03g0108200

Description

WD40-like domain containing protein

Version

NM_001186302.1 GI:297721734 GeneID:9271783

Length

3952 bp

Definition

Oryza sativa Japonica Group Os03g0108200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:466836..470787

Sequence Coding Region

466836..467149,467523..467592,467671..467715,467803..467871,468008..468061
,469012..469122,469227..469360,469440..469479,469792..469851
,469936..470117,470292..470787

Expression

GEO Profiles:Os03g0108200

Genome Context

<gbrowseImage1> name=NC_008396:466836..470787 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:466836..470787 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgcgcccccgtggaaggcgccttcctcctcctcatccgccgctcatccaggagatcctcgacgacgacctcttcgatgtagaggttaactacagcgacgaggaagaagaggaggaggaggaggaaagcgatgaagaggagtcggagtcggaggacaacgaaccggaggaggtggtgccggggcaggagagtatcggggagggatgcgggccggccatacaagctagggtttccggcgccgccgcggagaagaacgcctgccccgtttgtatggaggcctgggcctcccaaggcgctcatcgaatctggttcagacctaaggacattaccaatctctatgcaccagaggttgcagttccaaataatgatctggaaaaggaagtattgtatctaagggggaaagctgaatcccttggggaaacggtgatgaaacatgagaaattgatagaggagatgaatgagagattggttgagttgacaagtgctcagaagaggcagattctgtcagagcagagattaatgaacgttggtagctcaaagagacagaaagaattcttcatggatggacttcgagtcatggccatagatgcatttaaccaaacaattcttgcttctggaaaagcaccaggcataggacaagaacatgttctttataagtttagcatggtttcccatcacgaagctcggaatatacaacttcctctggatactaaaactgtcagggacatatgtatcttacctagtggctctgctatttttacatcactgggcaggaaactatcgtcatttagcatgacggctgaccgtgtcgttcttcagtgtgatttgccgtgtcctggctggtcatgttctgcggatgaatcttcgcgtcagatttgtgctggattgcagaatggcaatcttatcatctttgatatccgtcaaacctcaagaccgttgcattctatggtgggtttatctacacacccggttcatactctccatacggtcattgataacaacggttctagaaagtttctctctgcctcttctataggcccctgcatgtgggatactgatggtattcaaggcaggccaaagttgctattggggacagataatcaacgggtgtgcatttctcttgcatgtgccccttcatcaagtgatctattggtagcttcctttcggccaaaggttgaaacgtccgaggatgctacagcatctcaagtgtatctatcacaaacaccaacaccctctggtggagggaaattagggtatcattccttcatcaggagggcggggaactcgtcatccttcaccgaagataggacatgcagcacacttgtgagcgaaattcgcatgtcgaaatccgcaattataccttatggaaacaaccaacatctgtttgcttatggagatgagtcgctgcgtggggtccggacctggcgactaccatcgtttgagatgcattctgatctcagctccctccagcaaccggtcctggatctaaggtatgcagaaagttcatccggagggaggtatctcgggtacctgagcacggaaaagttgcaggttttcagaattaggtag</cdnaseq>

Protein Sequence

<aaseq>MASRPRGRRLPPPHPPLIQEILDDDLFDVEVNYSDEEEEEEEEE SDEEESESEDNEPEEVVPGQESIGEGCGPAIQARVSGAAAEKNACPVCMEAWASQGAH RIWFRPKDITNLYAPEVAVPNNDLEKEVLYLRGKAESLGETVMKHEKLIEEMNERLVE LTSAQKRQILSEQRLMNVGSSKRQKEFFMDGLRVMAIDAFNQTILASGKAPGIGQEHV LYKFSMVSHHEARNIQLPLDTKTVRDICILPSGSAIFTSLGRKLSSFSMTADRVVLQC DLPCPGWSCSADESSRQICAGLQNGNLIIFDIRQTSRPLHSMVGLSTHPVHTLHTVID NNGSRKFLSASSIGPCMWDTDGIQGRPKLLLGTDNQRVCISLACAPSSSDLLVASFRP KVETSEDATASQVYLSQTPTPSGGGKLGYHSFIRRAGNSSSFTEDRTCSTLVSEIRMS KSAIIPYGNNQHLFAYGDESLRGVRTWRLPSFEMHSDLSSLQQPVLDLRYAESSSGGR YLGYLSTEKLQVFRIR</aaseq>

Gene Sequence

<dnaseqindica>1..314#688..757#836..880#968..1036#1173..1226#2177..2287#2392..2525#2605..2644#2957..3016#3101..3282#3457..3952#atggcgtcgcgcccccgtggaaggcgccttcctcctcctcatccgccgctcatccaggagatcctcgacgacgacctcttcgatgtagaggttaactacagcgacgaggaagaagaggaggaggaggaggaaagcgatgaagaggagtcggagtcggaggacaacgaaccggaggaggtggtgccggggcaggagagtatcggggagggatgcgggccggccatacaagctagggtttccggcgccgccgcggagaagaacgcctgccccgtttgtatggaggcctgggcctcccaaggcgctcatcgaatctggtgaggccaaatttctgccttagaccttgtctatttgttcgattcgtgtcatgtgccttgcatcaatccaagaatatatactcgcactgtatgctttgctagttgctactgtagctttacttcccaatgttcttttgatgcaaattgttgacaaggtgcattctatgtgtagttgtattccttgtgggcatatctatggaagatcttgcctggagaggtggttgaggcacaagggcaacactagcgcaaccgtatgtatgccaatcgatcatactactagcttttaataacaatttttcacaatggacaggttctcatgcttaaccaaatcgtctcttgctattgatttttagtgccctcagtgtgggaaaaggttcagacctaaggacattaccaatctctatgcaccagaggttgcagttccaaataatgatctggaaaaggttcgactttattttgttgctagttactgctctcggacaattcttccatcatgaaccggaccctgtttcattcttcaggaagtattgtatctaagggggaaagctgaatcccttggggaaacggtacaatttctttgggtcacctcacctgcatgctccttttctctttatagttggaatcaacaatttttattttttcattgaggataggtgatgaaacatgagaaattgatagaggagatgaatgagagattggttgagttgacaagtgctcagaaggtatgctgtctcctattcaaactctaaatgatggcaatcgtgtgcactgattgttccggcctcagataatttatgttgtaattttcatttcactagaatcatgttcatatatttacttgttatgtgtgccttgcagaggcagattctgtcagagcagagattaatgaacgttggtagctcaaagagacaggtaatgccatctaattttaaattttccaatggttaatacctgaacattctcatgaaactattttattccaccgaagaaattggcagagcatttggctggaactacatatctggagccaccaacctcagtcacagcagattttaactctagcaacagttgcgattttgtctttcaggttgattctctttctaaacttatgtatgttataataattcaaggtgctcttattcttttgttctagtttcctttgacgtgcttttgacattttgtgtacactgaatattttacttatccatgttatgctaacttgaaacatactgtatggtacctgtagtaagttcatgatgtaatttttcaaagctaaaatggagttcagtggggacttcatgattcataatttttcttttctgaatggaaccactaccaggcagctcctatcagtttaaattttatataaacaaaggggggaggttacaaagaaacaatgtacagatagaacacacgctctagtgtataagactctaatccttcatgattcatgattccttcccagcttctatgacatgtaaaatggacaatatgtgtcaatattgattgattactctggaggaagtagtacttgtaaatctacatcttatgtttttggaaggttgccaaaaatcttaaattcatagcaagcatgacttaattttgtagccattgctattattcttttcttttaagaaaattagacaatagtgatagcatgggaagctatgtttttcaccttttaggtatttataatagtttattataataaaacagcttattatgttttatccttgaatttttgtagtgtcaaatgttggacaaaaaaaaaatattttgtggtgcaactgaatcctgcatgcatttatttcacactgaagtgaagtgttccattcttttcaattgataaccatgttttgtagaaagaattcttcatggatggacttcgagtcatggccatagatgcatttaaccaaacaattcttgcttctggaaaagcaccaggcataggacaagaacatgttctttataaggtacattttttaaatcggtagctttgccaaattgaatacatgttatttgtgcttatcaccaccaacttttacaatattcaccttattgcaattcttgtctacagtttagcatggtttcccatcacgaagctcggaatatacaacttcctctggatactaaaactgtcagggacatatgtatcttacctagtggctctgctatttttacatcactgggcaggaaactatcgtcatttaggtttgtcttcaatttagtagtctgttactttgtattagttctattttttttataacactgcataatattcttaatccagcatgacggctgaccgtgtcgttcttcagtgtgatttgccggtaattatttaaccctgctatccttatactcctgagaagtttgcagtgaaaatgtttgtttcgtccttacttggttagcctgtttggaacattgataaatgaaagttgtatctgttttcagaaaacaaaaaaaaaaaggaaacaaaattgtaagtagtgaagatgaagtagcctaatgcagttctgctacttaaatgaggatgcattattggatgaaaatgattagaatcatccatagacaaattgatcgaagcaccttcagacaatacttcctgttaataatattgctttctctattacaataccatgcagtgtcctggctggtcatgttctgcggatgaatcttcgcgtcagatttgtgctggattgcaggttaatcttttagtatctcctgatctgaagatttgttcatgtaatcgcaaagtttgacatgaaccgctttcttatgtactgcagaatggcaatcttatcatctttgatatccgtcaaacctcaagaccgttgcattctatggtgggtttatctacacacccggttcatactctccatacggtcattgataacaacggttctagaaagtttctctctgcctcttctataggcccctgcatgtgggatactgatggtattcaaggcaggtatgcaaaaaagtggcagtttaaaggcattaaactcctattacagcattactggaggcgtttttttttgtttttttttttttgcctttgtgctttgctgatcctcgaaaatctgtggaaacatgtggtttggtgggctgtggttctcatgtttgcctttgggctcggttgcaggccaaagttgctattggggacagataatcaacgggtgtgcatttctcttgcatgtgccccttcatcaagtgatctattggtagcttcctttcggccaaaggttgaaacgtccgaggatgctacagcatctcaagtgtatctatcacaaacaccaacaccctctggtggagggaaattagggtatcattccttcatcaggagggcggggaactcgtcatccttcaccgaagataggacatgcagcacacttgtgagcgaaattcgcatgtcgaaatccgcaattataccttatggaaacaaccaacatctgtttgcttatggagatgagtcgctgcgtggggtccggacctggcgactaccatcgtttgagatgcattctgatctcagctccctccagcaaccggtcctggatctaaggtatgcagaaagttcatccggagggaggtatctcgggtacctgagcacggaaaagttgcaggttttcagaattaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0108200, RefSeq:Os03g0108200