Os03g0111700

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0111700| Description = Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)| Version = NM_001186306.1 GI:297721742 Ge...")
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Gene Name

Os03g0111700

Description

Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)

Version

NM_001186306.1 GI:297721742 GeneID:9271386

Length

7758 bp

Definition

Oryza sativa Japonica Group Os03g0111700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:644615..652372

Sequence Coding Region

647853..647912,648002..648113,648214..648254

Expression

GEO Profiles:Os03g0111700

Genome Context

<gbrowseImage1> name=NC_008396:644615..652372 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:644615..652372 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agggattatcgcctcgtgaattgggactgcactcttcgaacagcaatttctgacgtagaggttgattatctagatattaaagaagaaaccatgttaaaggttcctggttataatacaactgtacaattcggcgtgttgatctcttttgcatatccacttgaggaaggattgggtatgcaattcatcccttcaatggccgaaagctcaaaataa</cdnaseq>

Protein Sequence

<aaseq>RDYRLVNWDCTLRTAISDVEVDYLDIKEETMLKVPGYNTTVQFG VLISFAYPLEEGLGMQFIPSMAESSK</aaseq>

Gene Sequence

<dnaseqindica>3239..3298#3388..3499#3600..3640#gggttgttgtagaatcttgtggatccacttggcagggtctgtggagaagcagcgcaggatgacgtcgctgccacggatcgagagctccgcgaccatgatgtagatgtggtcggatcctccgggaaccacgacgaggccagtggcggcgcctgtctcggtgggggtggcggggacgggaaaggaaatcttgtagactgcgtcccagagaacgtaggacttgctgtcggcaagaaacggatcggagctggaaaggagaaggatgccggaggggtcagcggcgaggacgctgcctgaggcgaggccgagcgaaggggacacgaggagctgcgagatgcgcggggttgcgacgagcgagagggagatgccgtccttagggaggtcgatggaggtgagcggtaagcggtccaatacaacccactcaggcggcgcggccgccggcggcgacgccatcgggtttctttctgggaagaaaatttgggggttttcgtacacgcaagcggcctgggaagggaaaaaaatttgttgcataccggctactcctgtgcagacccgctccagatggacgacgtggggatcggacggctatctccgctcggctccaatgcagcgcgatatggtgaggatggaggagtctcgctcataggtatcgactcattcggctcagatcctcttctctcatcttaccggcggccggcgccacctccgccgcaaacccaaaggcgtcgcctcccgacgtgttcccctccgcggtcccatccacctcctgcctgatcccgcgccgccgtctcgctcgttcgccgctgggacgcgtttatgcgcgcatcggggacggggaggactgccatggtctgggacctcggcctcgcgtgtaacacagcacctcgaccgacgaccatcgatcaaatggtgcccggccttgtccttcttgtcgacctgtatctgtatctgaccaacggtgaattggcagaattgctcataacattattcagagtttgttcataatgctttattcagagttgagagctagatgattgttctgcatgttgcctagattactactctaccaccagctggcttcagatggtcaaaatgtcattgattttcacaatgacaaaacacaaaatgtttactattgcacatgtcgaaagtcactgatctgtgaactgttcttcacacaggcaaaagagaaagaggaaaaaaagctcaaggcaaaggcaaaggcaaaggaggcagctaggctccaggttgaaacataattattgattttctatgttactgaatgtaaaccagataggtacttagtgagatgctcggtggacatggattttttctattttcattctgattggcttttctgtaggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaagaaagctgttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaatttcttgcatctcaaatggccaagcagtatagcccagctgctgttgagaaatcgtgagatgctacattgtctttctctatcttataactcaaagagtaagaaaggcctaattgaattgcaagcgtttgtatttccccattttaatgcagatggtatgcctggtgggaatcgtcaggatattttggggcagatcctgtggctcatactttgaagtttgcactagatattacgtgagttgatttagtgagctgcttttcatggaatcaatatagtcttttctacatacaacagattattccagatgcgttgatgtgctgccaagcggctaaattatttcctttcaggttttgccacctccaaatgtcaccggagcacttcatataggccatgcacttacagtggctatagaggtagtcatcattattcttgcggaagcatatatccattgtaacgttgtagatgttggctagacataagataatgattataactgccatgcatttaatcaatgcaggatgccattatacgctggcgaaggatgtcaggttataatgctctgtgggttccaggagtcgaccatgccggcattgctacacaggtctgcatcttggatttggttcaatggttcaccatcatctgaatttatcttatgaaacactcatctgcagataatatagtttagttgatatatcttcgttggtattattctgtcatgcttactacccaatcgttcagtcaccaatgggcaaatgcttcaaaagatccataggaaatgctgacctttttgtaagattttttttttgtttttcaaaataaattgtcaacatatgttgctcaattttattcaccctgtctttttttttgcctctaaaccaataatcttttttacctattaaatttattctatttaatctcacgttgctggattgcttaactccattttttttcctttcctttgttttgaaacagtaaatgccaattaataatctgtcctgtatcaggttgtagtggagaagaagcttatgcgtgaaaagaaattgacgaggcatgacatagggcgtgaagaattggtatctgaagtaagcactattttttcctgaacaaaagtttatgcctgttaactccctatattctttttattataaacgaacaatttatcaccattagcatatgaatatacaaatggatataatgttctatgttgttatgaaaattttggcgagcacattgtcatatatgatgcattgaaagtcttgtgtgttttatttgattagcttcattccccatttatcctttctcttgtttattctgttttatctatcatcttctggacaggttctcaaatggaaagatgaatatgggggtaccatattgaatcaactacgtaggcttggggcctcacttgattggtcccgcgaggtacatatcttattttctgtcgttaggagatagtatgagcaatgtattatttgtatagtttagttctgaatagcaacttcctctctaccttcgcaacagtgttttacaatggataaaccaagatcgaaagctgtaactgaagcttttgtgaggttgtacaaacaaggcctgatatataggtcagtttcatcgccttattttgtttttagagttgaacatttgttccttttattgattgtacagttatgttttacctgtttgcttctgtacagttgattttggtttttgattgccatcttagtttttttcccctgttatggatgatatgcttctatacactagagggattatcgcctcgtgaattgggactgcactcttcgaacagcaatttctgacgtagaggttattgagacttttaattgtctgttatgcggatttggttgcacatataactaaaatcgatgtctgtttgaaatttctatttttttcaggttgattatctagatattaaagaagaaaccatgttaaaggttcctggttataatacaactgtacaattcggcgtgttgatctcttttgcatatccacttgaggaaggattgggtgagatcattgtcgcaacaacaagaatcgaaacaatgcttggtgatacaacaatttctgttcaccctgaggataatagatacaagcatctgcatggtaggtatgcaattcatcccttcaatggccgaaagctcaaaataatctgcgatgctgagttagtggatcccactttcggtactggggctgtcaaggtaggagctgattctgagtacttgactatctctatttgatttcatctacttggatcttctgcatagacttcaattatcgtttgctggtcttttatgcagattacacctgcccatgatccaaatgattttgaggttggaaagcgacgcagccttgagttcatcaatatcttcacagatgatggaaaaataaacaactatggaggtgcacaatttgaaggaatgccaagattcactgctcgagttgctgttattgaggcactgaaggcaaaggtacttctagatttgcttaatcatcctatcacaccgtcttgtgatccatagtctctaaacgttgtttctggattactgctggtttgttatggatttatgcatcattgcaaaattgtatcagagtgaaaaatacaaaattgtgaacataccatgaaggttagtgtaggcgataaggaggtagtgcaatatagcatgaaggattcctaccctcgacattcttctatccctcctctctcattttctattaatgagcttcttagcatagcattacttttctgagaaatatgatgtattggcttctgtcgacatcactggttctattaaatctcggagcccgcatttggttaatgcatttatggttgggtaataatgacgtggaaagtagcattcaattattgatgtaatctggtactttcaccaatttattttctgtttgtgccttctttttttcatttggtttgatatggattttgttcaagtactgttggagctttatacttaccccctttttgtctgtaatataagggcttgtacaaggagacaaaaaagaacgaaatgtgtttgggtgtttgttcaagaactaacgacgtggtggagcctatgataaaaccccaatggtttgttaattgcaataccatggcaaaagcaggtattgatgctgtaaggtccaaaagaattgaaattattccacaacagtatgagcaggactggtataggtatgtctatcaccttctcgtttgtctcttgagaattatgccatctattgcaaatgacatcatgtcaaagtaatgaaatcagaagaaaatgatccattcattgttatgtccttacagatggcttgcaaatatacgtgattggtgtgtttcaaggcagctttggtggggacatcgtgtgcctgcttggtatgttgtactagaagatgatcaagagaacattctgggttctgataatgaccgttgggttgttgctagaaacgaaagcgaagcaaacctggaggcacatcaaaagtatcctgggaagaaattcgagttacatcaagatcctgatgtgttggacacatggttttcatctggtcttttcccattaaccgtacttggttggccagatgatacagctgatgttaaagctttctaccctggttcagtgctggaaactggacatgatattctcttcttttgggtagcgcggatggtgatgatggggatgcaacttggtggtgatgtgccatttcagaaggtaatgacgattagcacaactgtgctttctatgccattaaaactgtattataccattttagtagtgcaacctatacatttcatccattttttgcacacattaaccaattgatatcattatcttttatagccgtttgaaactatgctttaatactacagtgtaactctgatcaaaattcagacatgaagaaatctatcttcaattttgctagctgtggatgttaaaatggagtagtagtaaacgtcattattttctgttctaccatttgtttcaataggtcacactaatttcatctgaatggactctagcttgttaattttgaacattttttacacttttgtctgcatcctacttcgactgggcatgatacattgttgactgggaactatcctaatagatgaacacattaccttttgtccccgtctttaacatttatattttgaattatttagtaacctaagacatgtttagctgcaattagaagtataacttacattggtaagtcatggattcttgttgaacacatatgcttaaactgtggctctgctctgttgctcaggtttatttgcaccctatgatccgggatgctcatggatgcaaaatgtctaagtcgcttggtaatgtcattgatcccgttgatgtgataaatggtattccactggaaggtctcctcaaacgtttggaagaaggcaatctggatccaaatgaattgaacattgcaagcgatgggaagaagaaagattttcctgatggcattgctgaatgtggtactgatgccctccgttttgcactggtttcttacacttctcaggttgtagtcacatccatttgtgtttctgtcatgttatgcttgcaattcatcttctaatgatatctcttgtccacagtctgacaagataaacctggatatcaaacgagttgttggatatcggcaatggtgcaacaaattatggaacgccattcgttttgcaatgggcaagcttggcgatcattacactccccctgcaactatttctgtaactataatgccaccaatatgcaaatggatattgtcagtgcttaacaaggctattggcaaatctgtcacctcgttagaagcatataaattttctgatgctacttctgctatatattcatggtggcagtaccaactgtgtgatgtatttatagaagctataaagccttacttcttcaatgactctcaagagctcgaatcagcaagagctgcctctagagatgccttatgggtttgcttagataccggcttgcgcttgctccacccattcatgccttgtgtaactgaagagctctggcagcgtcttcctcagcctaaagattcttgtcagaaagattccattatggtatcagagtacccatcccttgttaaggtagtaaatttatcttaaaaagaagacataatttgtatttagaaatataattgagccaatatataatagcacacttttaccaatgaaacataatcttccgttatgacaggaatgggcagatgataaacttgaaaatcaaatagatattgccttggatactgtcaacaaactaagatctctgaagccaccaactgatacaaacgagaggtgcgtgtataatcatctatcttaacttatgttattcctgtaatgtccatgatgtctggttacttgattgattgattgattcattttgtttgatagttaacttttttcttttgctgatttttccatgaccagacggcctgcttttgcgctttgccgaggccaagagattgctgccattgttcaatgttatcagtctctagttgtgactctttcttctatatcatctctaaaggtgctgccttaaatttctgtacaattatgtgtgcattcctttttttctttgtattagcaaaattatctggatcaaaattcatactgaaacctggaatggagtgttgacctgatatttcaaattttattcagatcctgatagagagtgatgaaacaccacctgactgtgcaacagctgttgtgaacaaagtttatctgtatacctccaactccaaggagctctcaatgcagaagttgagcttgaaaagctaaggaaaaagagagaagaaattcaaaagtaagcgtgcttatgttagctcaaaatatctttaaggacgttttgcctatgtttcactggtaccctgcgctagcagtaacactttcaattactcatgcacgcaggctgcaacatgccctatcacagaaaatggaagcttccggttataaagagaaggctccacataatgtccaggaggacatgagaaaactgaccagttttttggaacaactagagattatcagtgaagctgaaaagaagctagatgcaaaaactggcaaaaactgagtcagaaatccctgttgtgattttgaagataccttctctttgtggaagtttcatctaaaattttgtactgttgccttagtcatatactagaatgatcagatagccagatttgtgattttgcagcttgaagatatatccacagcattatagttttggttgtacgacattgcatttgaaaatattcttacctac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0111700, RefSeq:Os03g0111700