Os03g0122200

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0122200| Description = Similar to 50S ribosomal protein L11| Version = NM_001055333.1 GI:115450394 GeneID:4331442| Length = 2192 bp| Defin...")
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Gene Name

Os03g0122200

Description

Similar to 50S ribosomal protein L11

Version

NM_001055333.1 GI:115450394 GeneID:4331442

Length

2192 bp

Definition

Oryza sativa Japonica Group Os03g0122200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1210594..1212785

Sequence Coding Region

1210899..1211107,1212133..1212196,1212294..1212466,1212553..1212739

Expression

GEO Profiles:Os03g0122200

Genome Context

<gbrowseImage1> name=NC_008396:1210594..1212785 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1210594..1212785 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccacctccttgtccctgcatggcgtcccatcccccaccgccaccaagctctcctcctcctttctcggcgcccccgcctccttcctccggccgacgccgccgccgctcgctgccccctcgcggagggcgctcgccgtcagggccatggcgccacccaagcccgggggcaagcccaagaaagtggtgggcctcataaagctggcgctggaggccgggaaggccacgccggcgccgccggtcggccccgcgcttggtgccaagggtgtgaacatcatgtccttctgcaaggagtacaatgccaagacggccgagaaggccggctacatcatccctgtcgagatcaccgtgttcgatgataaaagtttcacctttatcttgaagacccctcctgcctcagtccttctcctcaaggcagcaggtatcgagaaaggttcaaaagaaccgcagcgagagaaggttggaaaagtaacagcagatcaagtacgtacaatagctcaagagaagttgccagatttgaactgcaagagcattgactcggccatgagaattatagcgggcactgctgctaatatgggaatcgaggttgaccctccaatacttgagaagaaggaaaaggtgctcttgtag</cdnaseq>

Protein Sequence

<aaseq>MATTSLSLHGVPSPTATKLSSSFLGAPASFLRPTPPPLAAPSRR ALAVRAMAPPKPGGKPKKVVGLIKLALEAGKATPAPPVGPALGAKGVNIMSFCKEYNA KTAEKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGIEKGSKEPQREKVGKVTA DQVRTIAQEKLPDLNCKSIDSAMRIIAGTAANMGIEVDPPILEKKEKVLL</aaseq>

Gene Sequence

<dnaseqindica>1679..1887#590..653#320..492#47..233#tcccgccgttcatctcctcgtctcgccccgctccaagcgcgccgccatggccaccacctccttgtccctgcatggcgtcccatcccccaccgccaccaagctctcctcctcctttctcggcgcccccgcctccttcctccggccgacgccgccgccgctcgctgccccctcgcggagggcgctcgccgtcagggccatggcgccacccaagcccgggggcaagcccaagaaaggttcgtgtctcgctctgcagcatccatggatttgcttgcgctcgcgttggctgaatcgcggcgtgcgttctttgtttgttgtgcagtggtgggcctcataaagctggcgctggaggccgggaaggccacgccggcgccgccggtcggccccgcgcttggtgccaagggtgtgaacatcatgtccttctgcaaggagtacaatgccaagacggccgagaaggccggctacatcatccctgtcgagatcaccgtgttcgatgtgagcttaaaatcgtcaattccactgaatgtgtgtgaacatgcatctctaatgtgggtactcctaattatatgtgtgtttgcctggttttttgcaggataaaagtttcacctttatcttgaagacccctcctgcctcagtccttctcctcaaggcagcaggtgtgcacccttttagctagcatgaatctataattttgtttcgtccatgtattgaatttgcgatatgtttatacggttggacaaaataaaatgaaaacacttctgctaggtcaatgtttttgcttttgtattccatgtggcccaatgctataagaatattatgttcttctggagtattatgcagaagaatggattgaaagttccatgtcacaagttagatatggttatccgaaaagtttgactaatctatagggtgaactgcacaggttgccagtttgccatgacatatacattagacttagatgtttgctataacattagtaccaatgttgcacttatgtgaaatgaagtgcatatgagacgtaaaaaagttttctctgaaaagctaatcactagtacattatttattcactttacttccttgttcagccaattgaaagataatgcaacatgtgggcttcgcccattttgattctgatgtgcattttccatattttagttcttcatttccataggacagcgagaacaaggtaaaaaaatagcaaatgactactgcttttcactcttgcatatttctagtttgtgtttggtatatgatcagtagcgctagatggtatctattggattgttgatcaattaaaataagttaaccaataagtttttagatgttattaagcacacatatttatgcaacttgctctgcttacgattatatgtatttttactctggtttgtcatttcccttgtttcatgaatatggtgaggaagtttgtaatatgaatacatcagagagatgaataagttgtatggactcgttagtcacaaaatatctgtgctgtttgcgagttcaagcatgtctgcagactaaaagcaaggatgaacgcattgcacacgactgcgtacaatcgcttacaaacaaccgaccttgttacatctatgattatcctttctattgttcatgtagctcttttgtgagctttggatacttaagcaaatgatttctcacctccaatccttattcttaggtatcgagaaaggttcaaaagaaccgcagcgagagaaggttggaaaagtaacagcagatcaagtacgtacaatagctcaagagaagttgccagatttgaactgcaagagcattgactcggccatgagaattatagcgggcactgctgctaatatgggaatcgaggttgaccctccaatacttgagaagaaggaaaaggtgctcttgtagtctgtttctctggcacccatgaatcaccttactgatggccacctgtagattttacttcctttttgttcgtcaatatgttgttcctagtgcttgaatctttttccctccgtggtcagtttgagagcaaacagaccatctacttttcacaagctgtaatcatttacatccaaactgtagatggttttcatgctgcacctatttggtggagtttccacattttttcttgtgaagtccctatgatacaccacatgtgcacatagctcagcttgtcaaacctgagtaagatcttactgttcctgttgccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0122200, RefSeq:Os03g0122200