Os03g0124100

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0124100| Description = Fringe-like family protein| Version = NM_001055344.1 GI:115450416 GeneID:4331453| Length = 2169 bp| Definition = Or...")
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Gene Name

Os03g0124100

Description

Fringe-like family protein

Version

NM_001055344.1 GI:115450416 GeneID:4331453

Length

2169 bp

Definition

Oryza sativa Japonica Group Os03g0124100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1381175..1383343

Sequence Coding Region

1381195..1382595,1382692..1382802,1382895..1382903

Expression

GEO Profiles:Os03g0124100

Genome Context

<gbrowseImage1> name=NC_008396:1381175..1383343 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1381175..1383343 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgccgccggcaaggcgcccaagtgcaaggcttccttcttcctctgcagcctcctcctctactttctcctcccggtgctcgccctgtacgtcgttgccctcgccgtgtcgccgttctactcgggtagctcgtgcccggaggagagccttgccagtggcgacgttgcacatctcgcggccgccggcgatgctggcaacaggcgtaacgactcgtcgccgccgtctgatgacgccgcgccgaccgggctgggtcacattgtgttcggcattgccgcctcttcggagctctggaagagccggagggagtacatcagaacatggtggcggccggagcagatgagcgggttcgtgtggctggacaagccggtgtacgagttctactcgaggaacgcttccacggggcttcccggaatcaagatcagcgggaacacgaccaagttcccgtacacgcacggccgcggcagccggtcggcgctgcggatcacccgcatcgtgtcggagagcttccggctgggcctccccggcgcgcggtggttcgtgatgggcgacgacgacacggtgttcttcccggacaacctcgtggacgttctgtcccggtacgaccacacgcagccgtactacatcgggaatccgtcggagagccacatccagaacctcatcttctcgtacggcatggcgttcggcggcggcgggttcgccatcagccgcgccctggccgcgcagctggcgcacatgcaggacgggtgcatcgaccggtacccggcgctctacggcagcgacgaccgcatccacgcgtgcgtggcggagctgggcgtgccgctgacgcgccacctgggtttccaccagtgcgacctgtggggcgacgtgctgggcctcctgggcgcgcacccggtggtgcccctggtgacgctgcaccacctggacttcctgcagccggtgttcccgacgacgaggtcgcggacggcggcgctgaggcggctgttcgaggggcccgcgcggctggactcggctggcgtggcgcagcagtcggtgtgctacgacggcgacaagcagtggacggtgtcggtgtcgtgggggttcgcggtggtggtgacgcgcggggtgctgtcgccgcgggagatggagatgcccatgcgcacgttcctcaactggtaccgccgcgccgactacacggcgtacgccttcaacacgcggcccgtggcgcgccagccgtgccagacgccgcaggtgtactacatgcggcagtcccgcctcgaccgccgccgcaacaccaccgtcaccgagtacgagcgccgccgcgtcgcgcccgtcaagtgcggctggcgcatccctgaccctgccgcgctgctcgaccgcgtcatcgtcctcaagaagcccgaccccaacctctggaaaaggtctccgaggaggaattgctgcagggtgttgtcgtcacccaggcaagggaaggaccggaagatgaccatcgatgttggcgtctgcaggggcggcgagttcgccagaattgagggaagctag</cdnaseq>

Protein Sequence

<aaseq>MHAAGKAPKCKASFFLCSLLLYFLLPVLALYVVALAVSPFYSGS SCPEESLASGDVAHLAAAGDAGNRRNDSSPPSDDAAPTGLGHIVFGIAASSELWKSRR EYIRTWWRPEQMSGFVWLDKPVYEFYSRNASTGLPGIKISGNTTKFPYTHGRGSRSAL RITRIVSESFRLGLPGARWFVMGDDDTVFFPDNLVDVLSRYDHTQPYYIGNPSESHIQ NLIFSYGMAFGGGGFAISRALAAQLAHMQDGCIDRYPALYGSDDRIHACVAELGVPLT RHLGFHQCDLWGDVLGLLGAHPVVPLVTLHHLDFLQPVFPTTRSRTAALRRLFEGPAR LDSAGVAQQSVCYDGDKQWTVSVSWGFAVVVTRGVLSPREMEMPMRTFLNWYRRADYT AYAFNTRPVARQPCQTPQVYYMRQSRLDRRRNTTVTEYERRRVAPVKCGWRIPDPAAL LDRVIVLKKPDPNLWKRSPRRNCCRVLSSPRQGKDRKMTIDVGVCRGGEFARIEGS</aaseq>

Gene Sequence

<dnaseqindica>21..1421#1518..1628#1721..1729#atcacaaggacgccattgtcatgcacgccgccggcaaggcgcccaagtgcaaggcttccttcttcctctgcagcctcctcctctactttctcctcccggtgctcgccctgtacgtcgttgccctcgccgtgtcgccgttctactcgggtagctcgtgcccggaggagagccttgccagtggcgacgttgcacatctcgcggccgccggcgatgctggcaacaggcgtaacgactcgtcgccgccgtctgatgacgccgcgccgaccgggctgggtcacattgtgttcggcattgccgcctcttcggagctctggaagagccggagggagtacatcagaacatggtggcggccggagcagatgagcgggttcgtgtggctggacaagccggtgtacgagttctactcgaggaacgcttccacggggcttcccggaatcaagatcagcgggaacacgaccaagttcccgtacacgcacggccgcggcagccggtcggcgctgcggatcacccgcatcgtgtcggagagcttccggctgggcctccccggcgcgcggtggttcgtgatgggcgacgacgacacggtgttcttcccggacaacctcgtggacgttctgtcccggtacgaccacacgcagccgtactacatcgggaatccgtcggagagccacatccagaacctcatcttctcgtacggcatggcgttcggcggcggcgggttcgccatcagccgcgccctggccgcgcagctggcgcacatgcaggacgggtgcatcgaccggtacccggcgctctacggcagcgacgaccgcatccacgcgtgcgtggcggagctgggcgtgccgctgacgcgccacctgggtttccaccagtgcgacctgtggggcgacgtgctgggcctcctgggcgcgcacccggtggtgcccctggtgacgctgcaccacctggacttcctgcagccggtgttcccgacgacgaggtcgcggacggcggcgctgaggcggctgttcgaggggcccgcgcggctggactcggctggcgtggcgcagcagtcggtgtgctacgacggcgacaagcagtggacggtgtcggtgtcgtgggggttcgcggtggtggtgacgcgcggggtgctgtcgccgcgggagatggagatgcccatgcgcacgttcctcaactggtaccgccgcgccgactacacggcgtacgccttcaacacgcggcccgtggcgcgccagccgtgccagacgccgcaggtgtactacatgcggcagtcccgcctcgaccgccgccgcaacaccaccgtcaccgagtacgagcgccgccgcgtcgcgcccgtcaagtgcggctggcgcatccctgaccctgccgcgctgctcgaccgcgtcatcgtcctcaagaagcccgaccccaacctctggaaaagggtaatcaaacacacaccgtagttaaaacctgaattgatttgtacaacaaagaagcttgatttttgtaatggtgctctcaaaccggcgtgcgtgcagtctccgaggaggaattgctgcagggtgttgtcgtcacccaggcaagggaaggaccggaagatgaccatcgatgttggcgtctgcaggggcggcgagttcgccagaattgaggtagccaggtaggccacctccattaacaattttccgatatggcattattgatctgatcaccagctcgcgcgcgttgcgtttggttcgcgcagggaagctagctaggatcagttgctaggacagcaaaacgagagcagaaggcgaaaaccatcaagcatcaaggacggtatcggagcaggacgcgcccacctcgcggcggtgcacggcggatcgctcggttactgcttgcttcggctaatgatagctgtaaccttagataataggtgtatgtaagtaaccgaactcaccttgatacaacactgtgccggcgagaatgtggcgcacttgtgggcgttgtacaagtacgggcagtgctgctgcgaacggcgacaggcttgtttgtttgtgagcccgtcgactgtcgaggtgttcaaataatctggcaaacaggtgaagaccagaggctacgagtgttcaaatagcccatgggcaattttcaaaaaaaaaaagaaagctcatgggccatgtatcaactaactgatgaataagttcactttgtcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0124100, RefSeq:Os03g0124100