Os03g0132200

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Revision as of 12:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0132200| Description = Expansin-like protein A| Version = NM_001055403.1 GI:115450534 GeneID:4331516| Length = 1706 bp| Definition = Oryza...")
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Gene Name

Os03g0132200

Description

Expansin-like protein A

Version

NM_001055403.1 GI:115450534 GeneID:4331516

Length

1706 bp

Definition

Oryza sativa Japonica Group Os03g0132200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1809682..1811387

Sequence Coding Region

1809735..1809900,1810010..1810122,1810230..1810408,1810688..1810820,1810910..1811158

Expression

GEO Profiles:Os03g0132200

Genome Context

<gbrowseImage1> name=NC_008396:1809682..1811387 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1809682..1811387 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtctctgtccgttgctgcttcggctcctcctccctttcgcaccacgcgcgactactcctcgtcatcgttgcgttgctcgcgcctcggctcgcttccggctgcgaccgctgcgtgcgccgctccagagcggcttactacacctcctcgctcacgctgactgccggttcttgcgggtatggcacggcggccgcgaccttcaacggcggcggattcctcgccgccgcgggccccgcgctgtaccggggcggcgtcggctgcggcgcgtgctaccaggtgagatgcaaggacaagaagctgtgcagcaacgcgggcgcccgtgtcgtcgtcacggaccgcgccaggacgaaccgcaccggcctcgttctgagcagcccggcgttcgccgccatggcccgccccggcatggccgcgtcgctcaccgagctcgccgccgtggacgtcgagtacaagagggtaccgtgcgagtacaggcacaggagcctctctgtcagagtcgacgagagaagtcgcggacccaacgagctcaccatcagcttcctctaccaaggcggccaaaccgacatcgtcgccgtcgacgtcgcccaggttgggtcgtcgagctggaagttcatgacgagggagcacggaccgtcgtggagcatggcgaacgcgccgccggggccgctgcagatgaggctggtggtgaccggcggctacgacgggaagtgggtgtgggccgaccgggaggtcctgccgaggcggtggcgcgccggcgaggtctacgacacgggggtccagatcactgacatcgcccaggaaggctgcttcccctgcgacacgcacgagtggaagtag</cdnaseq>

Protein Sequence

<aaseq>MAVSVRCCFGSSSLSHHARLLLVIVALLAPRLASGCDRCVRRSR AAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLC SNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRH RSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMAN APPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGCFPCDTH EWK</aaseq>

Gene Sequence

<dnaseqindica>54..219#329..441#549..727#1007..1139#1229..1477#ggtctctctcttctccgaagcgacccacactccccgtgcccgagccagagagtatggccgtctctgtccgttgctgcttcggctcctcctccctttcgcaccacgcgcgactactcctcgtcatcgttgcgttgctcgcgcctcggctcgcttccggctgcgaccgctgcgtgcgccgctccagagcggcttactacacctcctcgctcacgctgactggtatgtcgacacgacggctctgtttttgttcgtggttttgcgtgcagagggagcggccggattatggatcgactgattgattctgttcgtttgttcttgcgtggcacagccggttcttgcgggtatggcacggcggccgcgaccttcaacggcggcggattcctcgccgccgcgggccccgcgctgtaccggggcggcgtcggctgcggcgcgtgctaccaggtaatcaagctcgatcgagaaggagaacacaaccgaagataggcaactagcttagctgcatatgccatgtccatggcttccccatcctgaccgattcgctgctgcaggtgagatgcaaggacaagaagctgtgcagcaacgcgggcgcccgtgtcgtcgtcacggaccgcgccaggacgaaccgcaccggcctcgttctgagcagcccggcgttcgccgccatggcccgccccggcatggccgcgtcgctcaccgagctcgccgccgtggacgtcgagtacaagaggtaagcaaagctcaccaagctttactttttacccagctcgctttcttttcaccaaccgcaccttagctcgtgttccacacatatatagataaatattaactttaccactgttcaacagagagagtttcaccggtccgttgctgtagtttaccagttgcaaagcgtacgtacgaaatgtttggcaagtgctaggcgaggcaatagatagtgaacacgtacgattgtcctaagccggaattggaagtcaggctcaaattcgtcagcgatgtgcatgtgcagggtaccgtgcgagtacaggcacaggagcctctctgtcagagtcgacgagagaagtcgcggacccaacgagctcaccatcagcttcctctaccaaggcggccaaaccgacatcgtcgccgtcgacgtcgcccaggtaaaaacacagcacagcacagaacaatcattaacaatctgcaagtgtttgtgtcgcagaatctaacaatcgtgtgttgggagctgcaggttgggtcgtcgagctggaagttcatgacgagggagcacggaccgtcgtggagcatggcgaacgcgccgccggggccgctgcagatgaggctggtggtgaccggcggctacgacgggaagtgggtgtgggccgaccgggaggtcctgccgaggcggtggcgcgccggcgaggtctacgacacgggggtccagatcactgacatcgcccaggaaggctgcttcccctgcgacacgcacgagtggaagtagaagcccagccacacgtacttctcctgtcgtcacggccattttggttgggctttgatgagaaagaagacgtctctcggctcgcctccagtagagatttcactgacccgatttagagtcctcctaatccctcggcaacttcagaatttcctcctccgtttcttcttcttcttttccaactttgtacatgagctactaactaatgtgtaaagataaaattaaagcaagttac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0132200, RefSeq:Os03g0132200