Os03g0132300

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Revision as of 12:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0132300| Description = TB2/DP1 and HVA22 related protein family protein| Version = NM_001055404.1 GI:115450536 GeneID:4331517| Length = 315...")
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Gene Name

Os03g0132300

Description

TB2/DP1 and HVA22 related protein family protein

Version

NM_001055404.1 GI:115450536 GeneID:4331517

Length

3157 bp

Definition

Oryza sativa Japonica Group Os03g0132300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1814952..1818108

Sequence Coding Region

1815364..1815768,1816298..1816507,1816581..1816644,1816738..1816794,1816886..1816984
,1817070..1817101

Expression

GEO Profiles:Os03g0132300

Genome Context

<gbrowseImage1> name=NC_008396:1814952..1818108 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1814952..1818108 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggctcattcattactggggctttaatgcttattcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctgagatcgagaagttgcggttctggtgtcagtactggattttacttgctgttctaactgtttttgatagagttggggataattttgtatcatggttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaacactggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagctgatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttacttccagaaggtttccaactatggtcagacaaggctttatgaaatcttgcaatatgttgcttcacagtcacaaacccaaacatctcgcccacaggcacgtgaacagcagcagcgcccaccaccagcacagactcggcaagtgaaccctgcacctcagcctgttcctgcaccttcggtgcctccactgccaccacaacccacccaagctccttctgctccaccaaggaaccaaacgcaggatacaactccagttcctgttcctcctcctggtgcagagtctcttgcccagccacaggcacatgctggtcctcctcaagctaacgccagcgacggccctcagaacactgaagctatgcagattgatccatctggtccatcaacaagcaacgcacgtcagtcatcaataccagacgaagatacgctcatccaggaggctattcggatgacgaggggccggcttaggaggcgcacggccgggtctggacctccaccaagttag</cdnaseq>

Protein Sequence

<aaseq>MAGSFITGALMLILGYAYPAYDCYKTVELNKPEIEKLRFWCQYW ILLAVLTVFDRVGDNFVSWLPMYSEAKLAFVVFLWYPKTLGTAYVYESFFKPWIAKYE ADIDHNLLELRTRACDMAVLYFQKVSNYGQTRLYEILQYVASQSQTQTSRPQAREQQQ RPPPAQTRQVNPAPQPVPAPSVPPLPPQPTQAPSAPPRNQTQDTTPVPVPPPGAESLA QPQAHAGPPQANASDGPQNTEAMQIDPSGPSTSNARQSSIPDEDTLIQEAIRMTRGRL RRRTAGSGPPPS</aaseq>

Gene Sequence

<dnaseqindica>2341..2745#1602..1811#1465..1528#1315..1371#1125..1223#1008..1039#gctcgcgcactacgccggcgagccgcgggcggcggcggcggctgggagtacgggagacgccggaatactagcctcgcatcctcctccctcgagttcgctgcgggaccgcgccatcctcgtcggagccccgggcccaggggacacgagcttctccgccctcttgtccttcggtcagcaccgacgccgccgtctcgctcgctcgctcgatcgagccgttgcttgtggccggaggaaaggtatactccctcgtttcgatttgttgccgtagcttcgcggcccgttagaagtgtttccaactttccatacacgctacgagtatcatcaggttgtttgtcagatatgggattaggctgctgttgcagttgagatgtgatccttttgctgtatgttctgcactctgtttccatgttggtgtaagcagcttgcatttggattttggagagatttgcgagacaaacgtagtgattgcctttgtagggggttgctttactgtctaggtagttcctcaatttagcgaagcaattttggcagctcgtttgattttttatttggggattcaagtcgatccgttatcaaactcctcaaattagcactagtgtttactaagtaggttgttcatatagattcccccccactctcttcatcctttggtatagcagttttttttttatttggaacggatctggtatagagaatctgaaatctataaattaagggtccgaaaagctactatgaatctacgatgcagtcatgattgaatactattttttaaaacgcatgatgactgtattaataaggggagcaaaagttgaaaactgccaaagcggtataatgatctgcttatctatgttttgtgttgtgaaggagcttgatgagggtttatgtgtaactgctgctgtagattcgatgctcataggacatccttgtttatggatgctgttattggctgttaaacagtgtttctaacaaatgtttgttttcttaacctttaggcctcaacagtcaatatggctggctcattcattactggggctttaatgtaagtagcagcagtttttgtacaaaagtactgcagtaggtaatggttttggtctgctacatgtttgttattacctattttgcaggcttattcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctgagatcgagaagttgcggttctggtgtcagtactggtatgctttttatgcccttttgttttattttggactatcattcttggatttcttatgcttgatctcagctgtgtgatcatggcttttgcaggattttacttgctgttctaactgtttttgatagagttggggataattttgtatcatggtaagttgaccatttggaattgtatttttttcaggtgtaacagtaaaggggaaatcttacctgcttgctgatgataattttgtttgcgtgtaggttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaacactggtatggtactctagtatttcaaactgctagaagaatctatctcttgtttgttggtaacacaggttgatttcaggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagctgatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttacttccagaaggtttccaactatggtcagacaaggctttatgaaatcttgcaatatgttgcttcacagtcacaaacccaaacatctcgcccacaggtatcttttaaaacgttgatgttactccccagtccatttatgtatttttgcttctagtatagtttgatctgttcatggtattttttttatattaacactagcctcattcttgttatgatcttttactacagtaggtgacttgagaagcttggattacctccttattgaattactaaatgttgcactctttaaccatgccatttataaggcggtgtcaacaatttttgtttgttagtgcacgatagagttgttatttgagcacattgtgatgtttactgttctagtattaatgtcctgtttaccagttgtaggattcaaaagattgtttgcacctctatatatttattactccctccgtctcataatataaaggattttgaagggatgtgatacatcctaggaccatgtattgtgtcacatctctccaaaatcccttatattatgggacggagggagtagcgagcatgtgtgacagtttatatttgtgtgactgacatactgacttcactgcaacccttctattctgcaggcacgtgaacagcagcagcgcccaccaccagcacagactcggcaagtgaaccctgcacctcagcctgttcctgcaccttcggtgcctccactgccaccacaacccacccaagctccttctgctccaccaaggaaccaaacgcaggatacaactccagttcctgttcctcctcctggtgcagagtctcttgcccagccacaggcacatgctggtcctcctcaagctaacgccagcgacggccctcagaacactgaagctatgcagattgatccatctggtccatcaacaagcaacgcacgtcagtcatcaataccagacgaagatacgctcatccaggaggctattcggatgacgaggggccggcttaggaggcgcacggccgggtctggacctccaccaagttagaacctacaccaagggtgatctcgacacaccattcgctctatgctgggatgattctgcaccttcgggcgttcaactgataacagaaggaaatgctgggttggtgaaaagtgattcaaatatttcaaatcctcctggagtgaacgcacacattcctcctcttgatgtgatgcctgttgctgtcgtctcactactcccaaatgtgcataatagaggcaatgatgacacatatcagtagcttggcatgtcgaatgcatcaagatgggtcgaacttgtccatgaggagtcaggtccgtcatatttgaattttgaaaagttcaacatgccaaagtatgcgtgactgacttgccgaaaatcatcacaaaaatcaaatgggtaattagtatagttgatcttgatccctttgtttttaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0132300, RefSeq:Os03g0132300