Os03g0135400

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0135400| Description = Cyclin-like F-box domain containing protein| Version = NM_001055422.1 GI:115450572 GeneID:4331536| Length = 2905 bp|...")
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Gene Name

Os03g0135400

Description

Cyclin-like F-box domain containing protein

Version

NM_001055422.1 GI:115450572 GeneID:4331536

Length

2905 bp

Definition

Oryza sativa Japonica Group Os03g0135400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1935195..1938099

Sequence Coding Region

1935537..1936958,1937262..1937355,1937552..1937757,1937873..1938067

Expression

GEO Profiles:Os03g0135400

Genome Context

<gbrowseImage1> name=NC_008396:1935195..1938099 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1935195..1938099 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcccgcctcctccagatccgatctcgtcgccgccgccgccggcgatggactccgcgctgccgtccgccgtcctcgccaccatcctctcccgcctcgacgtccgctccctcgtcgccgcctccgccgcctgccgctgcctccgctcctgcgcctcccacgccctctccttcctcccctccttccacctctccgaggtggcgctgacgcacgagctgctccgcccgctgatgccgctgaacccgagcctgcggagcatccgcctcgactgcgctaggctcgaggacgccgccatcgactgccttgcccgccccgacctccatgagctgatgctcctcaactgcgataacattagcggccgcctgctctgcgagcttggagccacctgccaagaactcagagtgctttccctgaatgcccttgctgagcgtaggggactaccgataagcttctctgatctgcagcaattgcttaatggctgttctcaattggagtctctcaggttggcccttgatttctcaatgttcgatgaccccaattttagccatgtgtgggcatctgcttcagaagccctgacctccctagaaatcggatatattccaatgacaatgttgcttgaacttcttactgtggctatggaatcgcaacgatgcatgcatcatgtaaaggaacctgttttctttcctagcctccaaaagttatgcctcaccgtggacttcatcactgaccatttgattggttcactatcaactgcgcttccatcattgacacatctggacctgcaggatgcacctataatagaacctacaacatcatcagatctcaccaatgctggtcttcagcagattaatccaaatggtaagttgaagcatatttctctcatgagaagtcaggagttcttattcacctctttccgccgagtaaatgatcttggaatcctgctaatggctgaaaagtgctcaagtcttgagagtgtctgtcttggtggtttctcccgcgtgacagacacaggttttagggctatcatccactcttgttctggccttcataagcttagggtgtcccatggaagccagttcacagatcttgttttccatgacataattgccacttccctttgcctgacacatgtgagcctgaggtggtgtaatctccttactgacgttggaattgagaggttgtcattcaacaaggatctcaacgtattggatctcagggactgcaggagtctgggtgatgaagctgttagatctctaagctgccttcccaaattgcagatattattcttggatggaagtgatatcagtgatcaggcattgaagtatctgggccttggaacatgtccactagcttccttatctctgaggggttgccgaaagttaacaaatgattgcataccactcttgtttgctggttctgttaaacagagcttacaggtgttggatctctctagaataccaggtattactgatgatggtatcatgttattagcaaggagtcgaactcctattattgaactccgaatgagagagaacccgaaaataggagatgctgctgtgatggctcttgcgtctatgctagttgatggtggaacccatggcagtagcttgcagctgctggatctttatgattgtggtgcgattacaccacttgcaatccggtggttcaagaaaccatatttcccaagattgcgatggctaggagtaacgggcagcttgaacagggttatggtggatgcccttgttcgaagccgtccattcttacatatggcttgccgtggtgaagaattggggactttcaattgggatagatcctccgattggtatcgacatgatgatgatgatcttgatgagcttgaacagtggattttgaatggtgaacctgtatctgacactgaaaccatcactgaagaataa</cdnaseq>

Protein Sequence

<aaseq>MCPPPPDPISSPPPPAMDSALPSAVLATILSRLDVRSLVAASAA CRCLRSCASHALSFLPSFHLSEVALTHELLRPLMPLNPSLRSIRLDCARLEDAAIDCL ARPDLHELMLLNCDNISGRLLCELGATCQELRVLSLNALAERRGLPISFSDLQQLLNG CSQLESLRLALDFSMFDDPNFSHVWASASEALTSLEIGYIPMTMLLELLTVAMESQRC MHHVKEPVFFPSLQKLCLTVDFITDHLIGSLSTALPSLTHLDLQDAPIIEPTTSSDLT NAGLQQINPNGKLKHISLMRSQEFLFTSFRRVNDLGILLMAEKCSSLESVCLGGFSRV TDTGFRAIIHSCSGLHKLRVSHGSQFTDLVFHDIIATSLCLTHVSLRWCNLLTDVGIE RLSFNKDLNVLDLRDCRSLGDEAVRSLSCLPKLQILFLDGSDISDQALKYLGLGTCPL ASLSLRGCRKLTNDCIPLLFAGSVKQSLQVLDLSRIPGITDDGIMLLARSRTPIIELR MRENPKIGDAAVMALASMLVDGGTHGSSLQLLDLYDCGAITPLAIRWFKKPYFPRLRW LGVTGSLNRVMVDALVRSRPFLHMACRGEELGTFNWDRSSDWYRHDDDDLDELEQWIL NGEPVSDTETITEE</aaseq>

Gene Sequence

<dnaseqindica>1142..2563#745..838#343..548#33..227#accaccaccaccaccaccgaactcgatccgccatgtgcccgcctcctccagatccgatctcgtcgccgccgccgccggcgatggactccgcgctgccgtccgccgtcctcgccaccatcctctcccgcctcgacgtccgctccctcgtcgccgcctccgccgcctgccgctgcctccgctcctgcgcctcccacgccctctccttcctcccctccttccacctctccgtcagtaaccacccaccccccctgcctctgctctctcgcatcgccatcgccatcgccaccggctacggatttgacggggtttcgtttcctcttgtgtctttgtctgtgattgaaggaggtggcgctgacgcacgagctgctccgcccgctgatgccgctgaacccgagcctgcggagcatccgcctcgactgcgctaggctcgaggacgccgccatcgactgccttgcccgccccgacctccatgagctgatgctcctcaactgcgataacattagcggccgcctgctctgcgagcttggagccacctgccaagaactcaggtactcttctactgctctgttaactctgcagggtgacatcgctaacagaaaatactgcagtttatgatcccaataaaacaaaatgcagtgaaccagcgttactgtttgcttagagtcgcttctgttctgaactaaagtttgattcagttgtcaaatatggtattgagaagtacatttctttcccgcttggatgtagagtgctttccctgaatgcccttgctgagcgtaggggactaccgataagcttctctgatctgcagcaattgcttaatggctgttctcaattggaggtattgtttcgctctcaattactattgcaacaactaatttgtgcaatcatgttttccattagttgaaaacaccgtagatatatataattctagtttttattaccgaatcagttatgtgaaaccaaaggtgtttatattgtgattgtttagttttctattactcttccctattggatcataagtcactatgaacataaatctttgtgaaatttctactactttgaagtatgattatcttttgctttgaaatccaattaccttttactgttctggactggcaacttatgtccctcttattttcagtctctcaggttggcccttgatttctcaatgttcgatgaccccaattttagccatgtgtgggcatctgcttcagaagccctgacctccctagaaatcggatatattccaatgacaatgttgcttgaacttcttactgtggctatggaatcgcaacgatgcatgcatcatgtaaaggaacctgttttctttcctagcctccaaaagttatgcctcaccgtggacttcatcactgaccatttgattggttcactatcaactgcgcttccatcattgacacatctggacctgcaggatgcacctataatagaacctacaacatcatcagatctcaccaatgctggtcttcagcagattaatccaaatggtaagttgaagcatatttctctcatgagaagtcaggagttcttattcacctctttccgccgagtaaatgatcttggaatcctgctaatggctgaaaagtgctcaagtcttgagagtgtctgtcttggtggtttctcccgcgtgacagacacaggttttagggctatcatccactcttgttctggccttcataagcttagggtgtcccatggaagccagttcacagatcttgttttccatgacataattgccacttccctttgcctgacacatgtgagcctgaggtggtgtaatctccttactgacgttggaattgagaggttgtcattcaacaaggatctcaacgtattggatctcagggactgcaggagtctgggtgatgaagctgttagatctctaagctgccttcccaaattgcagatattattcttggatggaagtgatatcagtgatcaggcattgaagtatctgggccttggaacatgtccactagcttccttatctctgaggggttgccgaaagttaacaaatgattgcataccactcttgtttgctggttctgttaaacagagcttacaggtgttggatctctctagaataccaggtattactgatgatggtatcatgttattagcaaggagtcgaactcctattattgaactccgaatgagagagaacccgaaaataggagatgctgctgtgatggctcttgcgtctatgctagttgatggtggaacccatggcagtagcttgcagctgctggatctttatgattgtggtgcgattacaccacttgcaatccggtggttcaagaaaccatatttcccaagattgcgatggctaggagtaacgggcagcttgaacagggttatggtggatgcccttgttcgaagccgtccattcttacatatggcttgccgtggtgaagaattggggactttcaattgggatagatcctccgattggtatcgacatgatgatgatgatcttgatgagcttgaacagtggattttgaatggtgaacctgtatctgacactgaaaccatcactgaagaataaggcatcactctttaaggtttcttgacccacaataatctccctgttctagcctgctagtgttcatctcctgttgtacctccaccatttcatttttctttcttataaagctattgtgtgattgtctctaccagttgaggtattttcttgcggtgtatgcatatgcaaacctatccgttgctgtatacttgtatcacgcaacacgcatacacgatatgcatgttgcattcagattccctgggcttatgtatgtacattgtttgctttcctgacctgatgttgtactggtatctttttccaggtttcagcttttctcatagttaagttatttatcgaccttatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0135400, RefSeq:Os03g0135400