Os03g0138400

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0138400| Description = Conserved hypothetical protein| Version = NM_001186326.1 GI:297721782 GeneID:9266546| Length = 4221 bp| Definition ...")
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Gene Name

Os03g0138400

Description

Conserved hypothetical protein

Version

NM_001186326.1 GI:297721782 GeneID:9266546

Length

4221 bp

Definition

Oryza sativa Japonica Group Os03g0138400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2097201..2101421

Sequence Coding Region

2097746..2098014,2101151..2101208

Expression

GEO Profiles:Os03g0138400

Genome Context

<gbrowseImage1> name=NC_008396:2097201..2101421 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2097201..2101421 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgccgcagcttcaggagtgtgtcttgtaacggcagcggtaagaatctggcctctccctcgccggcggcgggatcccgagcacccgcggccgcgccagccggctcgaagggggacgctgtggtctccgtcgagcgccgggcgctgctttcggcgcatcccgcgggcggcacggcgcggaagggcatgaggggatcgaaacggcgcgtgcagtggaaggataggcatggaaagaagctcatcgaggtcagggaattccagcctagcgatacggatgactctgatgatgaatacttggacacttgcatatgttcaataatgtaa</cdnaseq>

Protein Sequence

<aaseq>MDRRSFRSVSCNGSGKNLASPSPAAGSRAPAAAPAGSKGDAVVS VERRALLSAHPAGGTARKGMRGSKRRVQWKDRHGKKLIEVREFQPSDTDDSDDEYLDT CICSIM</aaseq>

Gene Sequence

<dnaseqindica>546..814#3951..4008#gaagtaaatcacagaggacgcgcgcggatttgccgttaccaccttctgcctgcctgcgccggattcgccttcctcccgattccaattttccaatcctcctcctcacctctcctcctcttccctcccccaccaattctgccgcgaatcctcccccctcctcccgatctcgaaaaaatctcgtcgcgttggcctggcccccacgcgcaccaccccctgctcattcgatccggaaaattcccccccgggggcccctctcggctttgcggcgaattcggttggtttcctcactcccacagctttgtttcttttttccggcggattttcactggccccatcggtagattagattcgatttttgttttcccgttgaagtgtctggattatggcttgatttcgtgcggatttggttctgttttggtgttttatcagctgggtgtttggagattctcgggctcgtcgattgcatgacggattgaattgagtcagcgggggggggggggggggggatcgaagttgggggacgaggagtttgatgccacccggcgatggatcgccgcagcttcaggagtgtgtcttgtaacggcagcggtaagaatctggcctctccctcgccggcggcgggatcccgagcacccgcggccgcgccagccggctcgaagggggacgctgtggtctccgtcgagcgccgggcgctgctttcggcgcatcccgcgggcggcacggcgcggaagggcatgaggggatcgaaacggcgcgtgcagtggaaggataggcatggaaagaagctcatcgaggtcagggaattccagcctaggtaaataagctgcctcaattaaatttgttttgtgcatcctttcgttgtgctttgagaaattttttcattctgttgtctggatgaaatattgaaatgtgaccacatgttaacgagacatcgaaagagagatcccaaagcaccaatttatttgcactgacaaattatccccttatatgattgcatagtatcagtagctagcgatacattctggtgaatgttttcctgtttggctagacaaattagctgcacagggttgttcagataggtaaatgacatgtgaggatgtcgtctagggctagccaagccggaaagtggacaaatgttagtttcggttatttttctgtattttgctagaagaggttaagctatcaattcactactcagcaaaagtaggtgttcggcaagatacatgacattagaacatgggatctgttaggaacatctcaaactctagtatgccacccagcaagatgagctgaattgtttggctgtagctttcgatcatctaatttgagttagtggcataaatcttcgaggcatttgcaaatttgccaccggttttttcaatattgcaagaatgccactcaaatgacagttctagtggcatttttgcaattttctagtggcagttttgcaataacgattcaaagtagtggtaaatttgcaatcgcccctaaatctttaagtccttttcctggtcttttctgaagtaacctgtagctagaaattagcttaagcttattgtgaccagtttactagcattttataattgtaggcgtggtcttcaaattatttaagtaaaaaggagccaagtacattatcatagagatgatatctattcaccattgtacattgatgaaaacctttatatgaaatgattgcataggacctcttagaggactgacctatgattggcatttacgccttaatgttcttatttcaatgtcaactgtcaaggatagtcgatggtggcatatccagaattccagatgaaattatatactgaaataagcatgtaaggagggaacaacgcaaatgaattaatagttggaatatgctgcattttctagtgctggactggcattattaactacaggcctctttacctgttaaggaaaagtctgcactgtttagtttggacataaaagggttatttgttgatgttgtatgtgaactttagtttagaaatctttgcccatcggtgtgatgaaaaaaagcagtagcttttctaatcaaatggtggtggtatatcttttgcgatttctggatttattgccaggctatgatcatttgagtttagttattctagatggttattaaattttacttatttagtttaactgaacattagtggcgcatgtgaagctgcacatgttaattaacaatacatgattgacaatctgataccccccaaaaccattattaaatgtagctcaaaagaagtggtacttaaagcaagtaatgcaggttgacatgttacatatgtacagtcaactgggcagctggacatgttgatttagtcacatgtacatacaataacaaaacattgatcaagtgacataattattgcgctatctggaattgcacaacctggcctacaactgaagatgtactctgctactcaaaggggtttttaaatgtttagtgtttctgtctgtgtttttctttctagtggatgtatgacataatagattagtctcttctgggcttccagctccatcccaatctgattaacagccaaccagaactatgatatgatcacatctccagcctgaaggtggtttagtggtacaagatagcaggaaaattttgattgtatggtcgaactttaaggagattgactgcgctgataaacagtactgtcagaaatttataatcctcgcgctactatgtggatgacagaggaaaatttcctacatgggacaacattcccattcctagactttgtgtattctctaacatgtgtaatccgtggcatcagcccagttgggacttgaggccccatttgtaatgtaggaggttcatagattttttgcagaaatttgataggaatcaggaaacattcacgtgctccaaaggagtgaccacataaattgtcaattatttaacttctttttacatgggaatgtcgattattaagtaactttgcaattccggggttacagtcttgttaattgtacgagctaattgaacctttgttaatctgagataaagcctaccatgtgcagctcatgtgctgttggctgcctgtggggttgatcctgcttggttccaattccagggccatctagtcttagtccatgaaaaagttgggagctaaattagatatcccaccaaaatgtaaactaaagaattacagacaatttggcagtatgaagttatgcttatgagcacatttactgtgcatagtcacagctttgcttttaggagaaccttagtagttatttttcctcaaaaaatctttagtaattgatcagtattacatatgtgggattcaatcgaataggttgtaggaggcttcatcacagttgcttgggcaatgacaaggggagcatctcaagtccactttatatgaagttggtttaaactagggagtatttttggtggtacacttatgttgttcaagatgtttgctttacctgtttataggcttccatgctcggtaacttatcgttcttgtttattctaaaaaaatatttctaaatgatgaggacctttattggcagagccataattttattgggggttagctgactgagttttgcgcatagaattacaaaagaccatccttgtatgcttgtgcaaaaactattagttgactcaagctgattttctgcctggtggcatcatttcaattggagtcaaaacacacagataaatgactatgcctagtatcatattttctttctgggtgtttgtatggggttggatggtatagacttggacgttagttttgtctctgtaaatgatatgcattttgaaatagcgccctgcctttaattactccatttgaagtatcagaattgtgccgatctttgactatatttcaaaatcgatttgagaattcaagtttatctttgctgcagtgcatctatttttccctctaactatggatcctcgttttaatattttgcagcgatacggatgactctgatgatgaatacttggacacttgcatatgttcaataatgtaaataccgtgaagcttaatctccggcacatcttgcaccatgtggagtctgttgctctatgcatgtgtagcaagagctgtagtgtgtcaattttgctggcttctgcgtacccctaacagtgatgtatacataagctcactccagcagactcaagccatctctgttcaggaggtactgcaaatgtagctaaccttgcaatggaggaagaactggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0138400, RefSeq:Os03g0138400