Os03g0138700

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0138700| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001055445.1 GI:115450618 GeneID:433155...")
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Gene Name

Os03g0138700

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001055445.1 GI:115450618 GeneID:4331559

Length

4744 bp

Definition

Oryza sativa Japonica Group Os03g0138700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2110318..2115061

Sequence Coding Region

2110625..2112055,2114446..2114663,2114800..2114953

Expression

GEO Profiles:Os03g0138700

Genome Context

<gbrowseImage1> name=NC_008396:2110318..2115061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2110318..2115061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtgaccgagagcttgccgttgccggccatggagaacggcgagggtaagggaggcggcgagtacacgcaggacgggtcggtggatctccggggaaaccccgtgctccgttccaagagaggcggctggaccgcctgctccttcatcgtagtgtacgagttgttcgagaggatggcgtactacgggatagcgtcgaacctggtgatatacctgacggacaagctccaccaggggacggtggaggcgtccaacaacgtcacgaactggtccggcgccgtcttcatcatgcccttgctcggagcctacgccgccgacgcctacctcggccgctactggaccttcgtcgccggctccgccatatacttcttggggatgtgtttgctgacgctggccgtgaccattccgtcgctgaagccaccgccgtgcgccggcggcgtgtgcccgccggcgtcggccctgcagctgggcgtctacttcggcggcctgtacatcatcgcgttcggcaatggcggcaccaagcccaacatctcgaccatcggcaccgaccagttcgacgagttcgacccccgggagaagatgcacaagatgtccttcttcaactggtggatgttcaccatcttcgtcggcatcctcttctcctccaccgtcctcgtctacctccaggacaatgtcagctggtccgtcggctatggcatccccacgctgggcctcctcgtctccatctccatcttcctcgccggcacgccgctgtaccgccacaaggtgccgcagggcagcccgttcacccgcatgggcaaggtcgtcgccgccgccgtctggaagtggcgcgtggccgtgccggcggacgccaaggagctgcacgagctggagctcgaggagtacacgaggaagcgcaagttcaggatggactccaccaacgccatgaggttcctaaacaaggccgccgtgaaggaggacggctcgccggcggcgaggtggagcctgtgcacggtgacccaggtggaggagacgaagcagatcgtcaaggtgatccctctgctggcgaccatgttcgtgccgtgcacgctcatcgcgcagacgaacaccctattcgtgaagcagggcaggacgatggaccgccacatcgggcgccacttccagatccctccggccagcctcggcgcgttcgtcaccctgagcatgctcgtcgccgtcgtggtgtacgaccggctgttcgtcccggccatccggaagtacaccaagaacccgaggggcatcacgctgctgaagcggatgggcgtcgggctgctgctgcaggtggtggcgatggcgacggcgtcgctgatggagagccggcggctggggtacgcgcggcggcacgggctggacgccgccgccgcggaggttcccgtgccgctcaccatcttcgagctgctgccgcagtacgtgctgatgggggtggcggacgcgttcctggtggtgggcaagatcgagttcttctacgaccaggcgccggagagcatgaagagcctcggcacggccatgtcgctgacggcgtacggcgtcggcaacgtgctcagcagcttcctcctctcgctcgtgtcgcgcgtcacgcgggagcggggcgacgcctgggtcaccaacaacctcaacgcctcgcacctcgactactactacggcttcctcactgtcctcggcgccatcaacgccgtcgtcttcgtcgcgctcagcagcaggtacaggtacaaggtcgagtcgacggagacgatcgacatcgccgtggacgtgaagggtgacacagccaaaaagattcagaactga</cdnaseq>

Protein Sequence

<aaseq>MAVTESLPLPAMENGEGKGGGEYTQDGSVDLRGNPVLRSKRGGW TACSFIVVYELFERMAYYGIASNLVIYLTDKLHQGTVEASNNVTNWSGAVFIMPLLGA YAADAYLGRYWTFVAGSAIYFLGMCLLTLAVTIPSLKPPPCAGGVCPPASALQLGVYF GGLYIIAFGNGGTKPNISTIGTDQFDEFDPREKMHKMSFFNWWMFTIFVGILFSSTVL VYLQDNVSWSVGYGIPTLGLLVSISIFLAGTPLYRHKVPQGSPFTRMGKVVAAAVWKW RVAVPADAKELHELELEEYTRKRKFRMDSTNAMRFLNKAAVKEDGSPAARWSLCTVTQ VEETKQIVKVIPLLATMFVPCTLIAQTNTLFVKQGRTMDRHIGRHFQIPPASLGAFVT LSMLVAVVVYDRLFVPAIRKYTKNPRGITLLKRMGVGLLLQVVAMATASLMESRRLGY ARRHGLDAAAAEVPVPLTIFELLPQYVLMGVADAFLVVGKIEFFYDQAPESMKSLGTA MSLTAYGVGNVLSSFLLSLVSRVTRERGDAWVTNNLNASHLDYYYGFLTVLGAINAVV FVALSSRYRYKVESTETIDIAVDVKGDTAKKIQN</aaseq>

Gene Sequence

<dnaseqindica>3007..4437#399..616#109..262#atcggaacagctctctctagctagcacatcagtgtgagagcttcaggcaaagctgctgccgagagtgagcagcaagctggacagtcagtcagctagctatagctagtaatggcggtgaccgagagcttgccgttgccggccatggagaacggcgagggtaagggaggcggcgagtacacgcaggacgggtcggtggatctccggggaaaccccgtgctccgttccaagagaggcggctggaccgcctgctccttcatcgtaggttagttgcttcttccatgtctccggcgacctcagctagctgccgtatgtggcatggcgccatggacgatgcagtgatagatgaaactgatcattactgtgatctgagctgatggataacgtactgtactgtgcagtgtacgagttgttcgagaggatggcgtactacgggatagcgtcgaacctggtgatatacctgacggacaagctccaccaggggacggtggaggcgtccaacaacgtcacgaactggtccggcgccgtcttcatcatgcccttgctcggagcctacgccgccgacgcctacctcggccgctactggaccttcgtcgccggctccgccatatacttcttggtatcaccgtctaacttcaccctttttttaattttcttaattaggccctgtttagattctctaaaatggcaaaaatgtaccattttgaagcacttttttgttatttttatctaaacactaatagtaaaagttggcaatttgctttttgacatttgctagtccatagtagtaaattgtgccaaaaagtgatttggaaccactctctccccacaccaaaaagtactagaataacaaaagtttaggatacatctaaacaccaactattacttttgcaatgccaaaacttttactgccaaaacttttgccatttatcatttgccattccaaattaatctaaaatgcctttaatcatcgtattgagaagctatttagctagcaagatatgtttggtaagtagcccgtgcagatattactcaatgattttccgatgatttgaattttagtctcctcaatcgttagattagatgattagcatcaatggatggacgaattgtcgtatttgcatggagttactagactagagagtggacttggtaagcaaatcgatctgcagtttttgtttgactcactagtgggccaagtcagagactgccctgcgctgcaccttacaattagcacgtttcacttacgcagaaattaaaccacgctgcttctcccaaactaatgattagtagctcacgtgattactgcttacctgcaaaaactctacttcctccgttttacaatacaagtcattctaacattttctatatttatattgatgttaatgaatctagatatatatatatctatctagattcattaacatcactatgaatgtgggaaatgctaaaatgatttacattctgaaacggagcgagtactagttacacgttttgtatgttttcccagcttggtggaatttggggccgaccattcgttcgaggtccattattagggctttaagttacactgtaaagctaattcagattgcaacattacgattccacttagacgtcatgttatatatgtacttcatacagagcaactttatctaatctagaagcctgaaatttcactaattaaggcatgtcttctgtgagccatattcggtaggaaatatatagctgtcatgcagctttaagtctatagtaaggcttatcgtgcttaattttcgttaattagtagggggccagacttaacgtacagtttgatgttaacgtgcaattccacgggtgtgaaatgctgtgttgtcttactctacatttctacaagtcaatgcacgagacactgtgggccccgatatgtatggattagaagaagcatgtgtcatcacaatgattggaaactttttattaacacttaggttcaacaaaagttcttattattgagcacggtctactttcaatatagataaattagatacaacttttctatcgaaataaattatggaaaatggggaatcggcaattgtgccttgtgtgaatggcctccaagcccagcacatccctagcaatatatacacatacactagttaagagagatagctataggtatcatatttatagtgcgaaatttaataattgaggttaatagagttaacaagagatactaaattttgtagtaataaatatagtatcaccccgatggactcactgttagaaaaatgcctacacatgtggatgagtcaagatttaacaagtatcaatcaaggtgttaatttcttcagtattatatatactattgtgaaatggcacgtcacgtataaataaagacgtgtgtattacgatctgattatcgtgtatcctccgctaccatttctttctgtaatgtcaaaatcgcgctacttctatctggtttttaaaatttgacaccataagcttttagacgtgtgtgtgactattcgttatatttggatctttttggtaattttcacctattttgttatgactatgcttatagtacatttaataataaaataaatcacaacacaataaaaaataattatgtttttttaataagaaggatgattaaagtttttttaacaagataacggagaggagagattcccatctgaatatattgctcaaatcgtcattgacacatagggagtacaaccgatattagcaattactccctccgttccgtaatatagcaatctagtaccggatgagacatctcatagtataatgaatctggacagatcttatagtacaatgaatctggacactacgatatgtcccatccggtactagattgctatattatggaatggagggagtagtaattacaaagcagaagagaagatgtacaaggatgattaaagttaacgatgtaaagcatggtagtatggctaccaatttgtgcaaaatcacatgctactggagatgataagttgaacgctgatgcaggggatgtgtttgctgacgctggccgtgaccattccgtcgctgaagccaccgccgtgcgccggcggcgtgtgcccgccggcgtcggccctgcagctgggcgtctacttcggcggcctgtacatcatcgcgttcggcaatggcggcaccaagcccaacatctcgaccatcggcaccgaccagttcgacgagttcgacccccgggagaagatgcacaagatgtccttcttcaactggtggatgttcaccatcttcgtcggcatcctcttctcctccaccgtcctcgtctacctccaggacaatgtcagctggtccgtcggctatggcatccccacgctgggcctcctcgtctccatctccatcttcctcgccggcacgccgctgtaccgccacaaggtgccgcagggcagcccgttcacccgcatgggcaaggtcgtcgccgccgccgtctggaagtggcgcgtggccgtgccggcggacgccaaggagctgcacgagctggagctcgaggagtacacgaggaagcgcaagttcaggatggactccaccaacgccatgaggttcctaaacaaggccgccgtgaaggaggacggctcgccggcggcgaggtggagcctgtgcacggtgacccaggtggaggagacgaagcagatcgtcaaggtgatccctctgctggcgaccatgttcgtgccgtgcacgctcatcgcgcagacgaacaccctattcgtgaagcagggcaggacgatggaccgccacatcgggcgccacttccagatccctccggccagcctcggcgcgttcgtcaccctgagcatgctcgtcgccgtcgtggtgtacgaccggctgttcgtcccggccatccggaagtacaccaagaacccgaggggcatcacgctgctgaagcggatgggcgtcgggctgctgctgcaggtggtggcgatggcgacggcgtcgctgatggagagccggcggctggggtacgcgcggcggcacgggctggacgccgccgccgcggaggttcccgtgccgctcaccatcttcgagctgctgccgcagtacgtgctgatgggggtggcggacgcgttcctggtggtgggcaagatcgagttcttctacgaccaggcgccggagagcatgaagagcctcggcacggccatgtcgctgacggcgtacggcgtcggcaacgtgctcagcagcttcctcctctcgctcgtgtcgcgcgtcacgcgggagcggggcgacgcctgggtcaccaacaacctcaacgcctcgcacctcgactactactacggcttcctcactgtcctcggcgccatcaacgccgtcgtcttcgtcgcgctcagcagcaggtacaggtacaaggtcgagtcgacggagacgatcgacatcgccgtggacgtgaagggtgacacagccaaaaagattcagaactgattatactctgtaaaaaaaaaatcagctcaactatgaacaatgcaactcgcatgcagtacagttagattggtccggactataaacttttcaggttaattctgtcatgcagtcatcctgatgaaaaaatatacccaagaatattaatcttgaaaggggaaaggtagtaatattcttcatctgcatgaaatttgttaacctttctagaaaggagaaaaatatatctccagtcagtatcatttcttggggaaaaggtgtaaatcggtatcaaatatatttataacatgatagtacgtatatgttggagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0138700, RefSeq:Os03g0138700