Os03g0148000

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Revision as of 12:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0148000| Description = Protein of unknown function DUF677 family protein| Version = NM_001055500.1 GI:115450728 GeneID:4331620| Length = 27...")
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Gene Name

Os03g0148000

Description

Protein of unknown function DUF677 family protein

Version

NM_001055500.1 GI:115450728 GeneID:4331620

Length

2710 bp

Definition

Oryza sativa Japonica Group Os03g0148000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2663918..2666627

Sequence Coding Region

2664127..2665208,2666353..2666407

Expression

GEO Profiles:Os03g0148000

Genome Context

<gbrowseImage1> name=NC_008396:2663918..2666627 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2663918..2666627 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccacgttcaggtgctttggcgggtgcgtcaagccagatgatcagcaagttcatgagcccaagaaggtggtggcgccgtcgtcgagcttcgatttccgggaggagtacacgagcgcgttccggaccgagtcgtacaacgacttctgggcgcgcgtcctggacatcaccctcgcgcacggcgcagccctggtgccgcgccatggcggcggcggcggctgcgcggcgtcgaagcggctcccctcctaccgcctcttcgccgagcacctgctcgagccggaccagcgcgccgtcgccgcagccctcgcgtcgccgcgcgggagccgcctccgccccgacgtgcgcggcctcctcgccgcctactacgccgagacggccaacgcctcgttcctctgcagccacctgctcaaggacatcgagcatatacgcctccgctaccgcccgctcaagcacacgctccgcaagctcgcctccgacgtcggggtgtccggcctcgccgacgtctccgccgcgctggggcagccgttcaccgcgctggccgcgtcgcaggggaggctccgggaggtgcaggccggctcgggcgacctgctcaggggcctcgacgccgggaggaagaaggcgcgccaccggatcaggagcgtcgcgcggctcaggcgggcgctgtcggtgtccttcgtcacggccgtcgccgtcgtggccgtcgtcggcgcctgcatcggcgtgcacatcctggcggcgttcgcggcgttcccgatgatgtcgccggcgtggctaggggagcggttcttctccgggcgggcggcgcggcgggcgctggtgcagctggaggccgcggcgaagggcacgtacatactcaaccgggacatggagacgatcagccggctggtggcgcgggtgcgcgacgagggggaacacatggtggcgctgcggcggctgtgcgtggagcaccggccggcggcgggcgccggcgggaaggggaggctggtgcaggaggtgctgaggcagctgagcaagaacgaggagagcttcaggcagcagctggacgagctcgaggagcacctcttcctctgcttcatgaccaccaacaaagccaggatcatggtgatgaacttcatggctgctgctgcaaggtag</cdnaseq>

Protein Sequence

<aaseq>MGATFRCFGGCVKPDDQQVHEPKKVVAPSSSFDFREEYTSAFRT ESYNDFWARVLDITLAHGAALVPRHGGGGGCAASKRLPSYRLFAEHLLEPDQRAVAAA LASPRGSRLRPDVRGLLAAYYAETANASFLCSHLLKDIEHIRLRYRPLKHTLRKLASD VGVSGLADVSAALGQPFTALAASQGRLREVQAGSGDLLRGLDAGRKKARHRIRSVARL RRALSVSFVTAVAVVAVVGACIGVHILAAFAAFPMMSPAWLGERFFSGRAARRALVQL EAAAKGTYILNRDMETISRLVARVRDEGEHMVALRRLCVEHRPAAGAGGKGRLVQEVL RQLSKNEESFRQQLDELEEHLFLCFMTTNKARIMVMNFMAAAAR</aaseq>

Gene Sequence

<dnaseqindica>1420..2501#221..275#aattcttcctcctctcatcactttgacccgataacgttgctgcctcgcatgctcgaccaagaagagaaggaaaaaataatattagcttagctgatcgtctggttacatatagtggcaagcaacgacattgatcatcgaattctatagaggtcagacgaaaatactagtagcttctgatcagcttggacgtcgatcgcatcgagtgttctgtctgagtaatatgggcgccacgttcaggtgctttggcgggtgcgtcaagccagatgatcagcaaggtacgtagattaattgttgcacattctgacaaacatgcatgcatgcatgtcaagttatgtactctagcacaatgcacatcctcttccattagtacaccatatgtcacataaaaaccattaaattatagagctatgtttagatttaaaacaaaaacttagagtaatctctatctctcatctactagcaatattaaaaaaactgaagatgattttaccattactctggtacgttatctgtctttaaatctgtatttaagtttgttcgtttttgaaaatacagatatatgtttgaatcagtttttaagtttactcacttttagaaatacaaaagaaataatataataaatctctttaaaagaactcgtatgctaatctgagacgagagtccgaattgcagttcatgatttcctaaataaattatccaagcacatttcaccataactaaacagtataataataataataataataataataataataataataataataataataataataataataataataataataataatagttttaacctattgcaatgcacgagtgtatatatatatattgctagtgtttaaatattataggagccggagtagcattctattactagattgtttgcatcgcgtggaaggacgtaaacccggtcgatcagtcactgtctggtggaccctcgccggcggaggtaaaataaaaaaataacgcagtcacaatgacacggggctctgtcggagccatccaacctgtagcgtatatgcatgcattcgtacaggagcacgccaagacaagccgcaatcgaaccatgtcgcttcgctttgacacatgttaattagctagctagctagctaacaattcgtcgtcacaaactaaaccaaaccaaatcacacgcatctgtataaaaagcattcgtgcgtgcatatccatcaaccaaccgcaacattgcattgctatcgatcgaggagatcgagcatggctggcagcacgttcaattgtttcggtgcatgcatgcagcatcacgctcaacaaggtagctgcacagatcgaattagcgtatcgatcgatgcatggttttcgatctcagtttggtcgttaattttctcatggtgattactgattcggcgtgtgatgattgatgcagttcatgagcccaagaaggtggtggcgccgtcgtcgagcttcgatttccgggaggagtacacgagcgcgttccggaccgagtcgtacaacgacttctgggcgcgcgtcctggacatcaccctcgcgcacggcgcagccctggtgccgcgccatggcggcggcggcggctgcgcggcgtcgaagcggctcccctcctaccgcctcttcgccgagcacctgctcgagccggaccagcgcgccgtcgccgcagccctcgcgtcgccgcgcgggagccgcctccgccccgacgtgcgcggcctcctcgccgcctactacgccgagacggccaacgcctcgttcctctgcagccacctgctcaaggacatcgagcatatacgcctccgctaccgcccgctcaagcacacgctccgcaagctcgcctccgacgtcggggtgtccggcctcgccgacgtctccgccgcgctggggcagccgttcaccgcgctggccgcgtcgcaggggaggctccgggaggtgcaggccggctcgggcgacctgctcaggggcctcgacgccgggaggaagaaggcgcgccaccggatcaggagcgtcgcgcggctcaggcgggcgctgtcggtgtccttcgtcacggccgtcgccgtcgtggccgtcgtcggcgcctgcatcggcgtgcacatcctggcggcgttcgcggcgttcccgatgatgtcgccggcgtggctaggggagcggttcttctccgggcgggcggcgcggcgggcgctggtgcagctggaggccgcggcgaagggcacgtacatactcaaccgggacatggagacgatcagccggctggtggcgcgggtgcgcgacgagggggaacacatggtggcgctgcggcggctgtgcgtggagcaccggccggcggcgggcgccggcgggaaggggaggctggtgcaggaggtgctgaggcagctgagcaagaacgaggagagcttcaggcagcagctggacgagctcgaggagcacctcttcctctgcttcatgaccaccaacaaagccaggatcatggtgatgaacttcatggctgctgctgcaaggtagagctctggatgcatcaacatgatgaaggaaaaaggaaattcgtacctctgtaggacacattttagtctttgtacataacaacagtagatttatttttcttagtacagaaaaaagggaaaaatatttcatttggcattaaaggtttttgctttattttttttgtacatatatacacacagcatgtaaacatgttacagcattgaggaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0148000, RefSeq:Os03g0148000