Os03g0151100

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Revision as of 12:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0151100| Description = Appr-1-p processing domain containing protein| Version = NM_001055516.1 GI:115450760 GeneID:4331639| Length = 4961 b...")
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Gene Name

Os03g0151100

Description

Appr-1-p processing domain containing protein

Version

NM_001055516.1 GI:115450760 GeneID:4331639

Length

4961 bp

Definition

Oryza sativa Japonica Group Os03g0151100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2801413..2806373

Sequence Coding Region

2803606..2803801,2803946..2804158,2804237..2804330,2804516..2804586,2804719..2804838
,2805609..2805664,2805759..2805836,2805923..2806282

Expression

GEO Profiles:Os03g0151100

Genome Context

<gbrowseImage1> name=NC_008396:2801413..2806373 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2801413..2806373 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagcgctcgccgacggccgcgtcggcctcggcctcggcctcctcggtggcggcggcggcgggcgtgggcggggtggagccggccgtgacgctcgaccaggtgccgcggtggagcgacgccgaccagcgcctctccccctcctcatcccccaccgccgccggatccgacgagacccccgcctcgtcgttcctctcgttcgccgacccgctcatcggcgacggcgcggccgctggggccgggggccgtggcgcgtcgcggttccccgtcgaccacgagatcaactcgaagatctgtctctggcgcggccacccgtggaaccttgaggtcgatgccgttgtcaattcgacaaatgagaacttggacgaggcgcatagtagtccagggctgcatgcagcggctgggccagggctcgccgaggagtgcaccaccctgggtggttgccggactgggatggctaagatgaccaatgcatatgatctgcctgctcggaaggtaattcatactgtgggccctaaatatgctgtcaagtatcacacagctgcagagaatgcacttagccactgctacaggtcttgtttggaacttctcattgagaatggtctggaaagcattgcaatgggttgcatatatacagaagccaaaaattaccctcgtgaaccggctgctcatgttgcaataagaactgttagacgttttctggagaagcagaaaggcaaaataactgctgttgtcttttgtactactacatcatctgatacagagatatataagcgattgcttcccctatatttccctcgggacaagaaagaggaagagattgcttcattgaaacttccagctgatgttggggatgagaatggtgaaacaataatagatgaacggaaaatacgaataaaacctttgcctgctgggtctgctattaacaaatctgcagctcctgcgccagtagatattcctctttctgattctggattgacacgtagtaggaattctttcaagttagattcatatttggatcctgcctttatgtcactaattaaagatccagatctccgacgcaaggagcagttggaaaagtctgttcaggcaaacaagggatttaattgggctaaattggttggatttggcgaccttggtggtcctccattatctgctgctgaagattattcacttcattcatga</cdnaseq>

Protein Sequence

<aaseq>MQQRSPTAASASASASSVAAAAGVGGVEPAVTLDQVPRWSDADQ RLSPSSSPTAAGSDETPASSFLSFADPLIGDGAAAGAGGRGASRFPVDHEINSKICLW RGHPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLAEECTTLGGCRTGMAKMTNAY DLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLESIAMGCIYTEAKNY PREPAAHVAIRTVRRFLEKQKGKITAVVFCTTTSSDTEIYKRLLPLYFPRDKKEEEIA SLKLPADVGDENGETIIDERKIRIKPLPAGSAINKSAAPAPVDIPLSDSGLTRSRNSF KLDSYLDPAFMSLIKDPDLRRKEQLEKSVQANKGFNWAKLVGFGDLGGPPLSAAEDYS LHS</aaseq>

Gene Sequence

<dnaseqindica>2573..2768#2216..2428#2044..2137#1788..1858#1536..1655#710..765#538..615#92..451#gcttggccgctctctctcacttcgcgcgcgcgcgcgaacccgcacctatcgccgcccatgccctcgcgctcgcggctctgatccggtcgccatgcagcagcgctcgccgacggccgcgtcggcctcggcctcggcctcctcggtggcggcggcggcgggcgtgggcggggtggagccggccgtgacgctcgaccaggtgccgcggtggagcgacgccgaccagcgcctctccccctcctcatcccccaccgccgccggatccgacgagacccccgcctcgtcgttcctctcgttcgccgacccgctcatcggcgacggcgcggccgctggggccgggggccgtggcgcgtcgcggttccccgtcgaccacgagatcaactcgaagatctgtctctggcgcggccacccgtggaaccttgaggtcgatgccgttgtcaattcgacaaatgaggtcggaattcgcttagctgctagcctcgtggtgttggcgtgctgctaatgttacagttgatatgataagttttgtggttggtgtagaacttggacgaggcgcatagtagtccagggctgcatgcagcggctgggccagggctcgccgaggagtgcaccaccctggtgcggtttgattttggggttgctgttttgggggtcaattggattatttgggttgcaattcatatgaggattttatttttgtcgatgattacagggtggttgccggactgggatggctaagatgaccaatgcatatgatctgcctgctcggttggtgatctgattttgtttgtacggtcgctttctaatgtgtggtgcatatgtatttacagtattagcattttttattttcaaaaaaaaagtgaggataatggcatggaactcttgaatcatgataatatctcacaatatacccaaatcactatgttatctgcatgcattgctaaacacagggtcctgaatcccattagatctgtgaacattattatctaaataagagaagcacacatgatcattcatcattgtaaacctgttctttgaatataacacaaacatatgttcttctgctgttaatgatttgtactttcttaaataaatatcaaaaggaataataggtttgtatggcgtgtttcatgggttgattcatattgcgatgtttctatggcagttatattcttatcatactaacctcctgttttgtctgcaaatggctgagctattacattcaaagctttcacatcacatagattgtccataatgtgctcagaatctcagactagatttcttcttaagtgctatatattccacttcattacttcaaaaccctattgcaggttgactgtaatttgttggagcaatgcagctttagctctacgatatttcatttgaagaaatgtgaaaaaaagtgacaatgtttaccagattaaaacctacttgttttctacctgaggatgttagtttatttcatgatatggttttgagatgatacactgatatacatgctcttcactgacctataatgcttatgaatggtctggcaggaaggtaattcatactgtgggccctaaatatgctgtcaagtatcacacagctgcagagaatgcacttagccactgctacaggtcttgtttggaacttctcattgagaatggtctggaaaggtatattaaaagcaccatttgaatgcatatttggtttgggttgttttgaagttcctgaatgctacatttcacattgcatatgttgtaattccatcaaagctaagtattttattttgcctttcatgtgattagcattgcaatgggttgcatatatacagaagccaaaaattaccctcgtgaaccggctgctcatgttgcaataagtgagttatctgatcaatagtttcttctgccttttgttatctttcgctgtttgattatttctactactcttatgcgattgccttactggtggagacagtagtttctttctttatgaatgattatctgttacacatttagcttttcctggttttaattcccgacttttttggatgatggtgaacaggaactgttagacgttttctggagaagcagaaaggcaaaataactgctgttgtcttttgtactactacatcatctgatacagagatatataagcggtacttagactaacacccacttatgctagctaaatatgataaatttcttataaaggttgacaacattgcattttgcagattgcttcccctatatttccctcgggacaagaaagaggaagagattgcttcattgaaacttccagctgatgttggggatgagaatggtgaaacaataatagatgaacggaaaatacgaataaaacctttgcctgctgggtctgctattaacaaatctgcagctcctgcgccagtagatattcctctttctgattctggattgacacgtagtaggtgagacaaccatttgccaaaattttgattcgattactatttgatctccttcaagacacatttttcattatatacccattgtatgttcagttgtcctatggcccccaattgggttttatctgatcttagctagtctctaaacaggaattctttcaagttagattcatatttggatcctgcctttatgtcactaattaaagatccagatctccgacgcaaggagcagttggaaaagtctgttcaggcaaacaagggatttaattgggctaaattggttggatttggcgaccttggtggtcctccattatctgctgctgaagattattcacttcattcatgacaccttgctaaagcaaattctctcagtctctcagagattgctgagatgaaaataatgtatgtaaattaccattttcagttaaattcttttctaagattctccctagtttgcttgtttattttagtttaccttttatcctcacatcatttgccttttccccctcaattacagttaccgcggtggagttgatagtgaagggcgtcctgttatggtggttgttggtgctcactttctacttcgctgtttggatcttgagcgatttattctatatgtagtaaaggtaattatcaatctaactgagatacacgacttgcacaatataggatgcagaaggcctgattgcctttccggacataactgaagtgaatttgtgaactcccaaagattagctgatagctgtcagttacatatttccagtgcatatgagagcgatggagtttctcagcatttgttctaccctgaccacaagctgatgattcctatctattaatgtgtttttttctcaacaagtaatttcaatgcaaccatttctattcgttataccttgtgatgatgattctattttttgtagagctttagaatttcccccctttacaaagagcattggaattccactagattgcagataccaaagattgatgcagcatattttatgagactctccttagttgcattacttttttacagtgagataacatattccttgggttgatcttaaatgaggggtggaccttggaagtttttttaggaagggaatataaatacttgtatataatccaagtttcctactgccttgtgttaaatagatggtttttactttgtccatgaatcaacctggattttctcaatattcaggacatactggatggaacaccaagtttagtactccatccatcttgttttgaaatcatgagtttgcaggaaccaatatacagtgtctgttatgaacttatgaggtgtgttccatacagtagtgccagagagccacagagcatctaatatctatagttccaatagaaaggaacagttttgttttttcccactaacttttttgaagcgggcctggttcaagcatcatggcaggaattcccaaatgaactatataatagattagctaagttcgttgcccaaaagttagcctatctagaccactgttaatgcctttgtgtatttgaatttggcagcttattctgacaggattaaatttgccttctttgcaggagtttgaaccattgattcaaaagccttactcaattgtctatttccactcagcagcatctttacaagtgtaagattcatgaataagtaggttgagaaggacattgcaatcctttctaaaacttggtgcatgtaacacgagctgttttaattgattttgcaggcgaccagatttaggattcatgaagcggttgcaacaaatattaggtcggaagcatcagcgcaatcttcatgtcggtatctcatatgatcacactgtgtggttctgattgttcatttaggaaaagaaatatgaactggtgttgttattgcactccacaggctatatatgtacttcacccaactttgggattgagaacagctatattggctttgcagcttttcgttgatggggaggtacttgctattgcagccatctcgctcgtttcctccccaattctttgacacatttctttttctaattttagcatcttcctttttgtctcaattaggtctggaagaaagttatctatgtcgacagacttgtgcagctgttcagatacgtaccacgtgaacaactgacaattcctgattttgtcttccagtatgtaatgtttctagaattttaagaggtctgctataaactagggtcaatactgacattctgacaattaaactctgcaggcatgatctcgaagtgaatggtggaaagggcataataattgaccctagaacaaagcatgtctaccaaagaccatcaggttgataaatatagcctgctatatgcagagatcctccaataccacactgtacaatctctttgccctctatagaagattttccttcttgatctgtgcattttgtatctagttgagttggcagtgttttgtagccttctagtcttttctttctgttctgtcagggaagcgtagattattatgtatatgtatcgctctatataataataaaaaatgctgtggccgtctcaaattctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0151100, RefSeq:Os03g0151100