Os03g0151700

From RiceWiki
Revision as of 12:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0151700| Description = Similar to WD repeat protein (Fragment)| Version = NM_001055521.1 GI:115450770 GeneID:4331644| Length = 5967 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0151700

Description

Similar to WD repeat protein (Fragment)

Version

NM_001055521.1 GI:115450770 GeneID:4331644

Length

5967 bp

Definition

Oryza sativa Japonica Group Os03g0151700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2824050..2830016

Sequence Coding Region

2824118..2824363,2824466..2824681,2824764..2825855,2826264..2826386,2826797..2826978
,2827062..2827293,2827395..2827604,2827726..2827854,2828728..2828796
,2829300..2829422,2829506..2829556,2829650..2829799

Expression

GEO Profiles:Os03g0151700

Genome Context

<gbrowseImage1> name=NC_008396:2824050..2830016 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2824050..2830016 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaaggcctacctccggtacgagccggcgatctccttcggcgtggtcgcctccccggagtccaacgtcgcgtacgacccctccggccgcctcctcctcgccgccgccctcgaccgcttcgccgcctgggacctcaagcgcggcctcccctccctctccttcgccaccgccgccccgtccccctccctcgccgtctcctgcctcgccaccttcccctccgccgcctccgcctccgcctcctcgattgcgagtgggcacgccgatgggagcatcaggctatgggacacggagaccggctcctgtgaggcgaccctccatggccaccgctctgcggcttccgccctcgtattcggcccctctggcgccatcatcgcctctggcagtaaggactgtgacattatcctttgggatgtagttggacaggccggcctttatcgactccgtggccaccgtgatcaggtcacgggtttggtgtttctggattcagggaagaaactagtgagctgctccaaggataagttaatccgggtttgggaccttgacacgcagcactgccttcagattgttggtggccaccgcagtgaaatatggtcaattgatgtggatcccagcgagaggtttttggtgtctgggtcggccgatcaagagctgcgggtgtttacggtccggaaatctgctgaggagggtgaggattggagcaagtgggatatgctgaagctatttggtgagattccaaggcaaagcaaggaaagggtagcgactgttaagttcaataagaacggtaatcttgtggcatgccaggtggctgggaagacggtggatatttatagggttcttgatgaaacagaggcagcacggaaggccaagaggaggatgcacagaaagaaggagaaggctttggccaaatccatggctgctgaagggaatggtactgttatagatcctttgtcggctcaagacttgcagaatcccactcctgttgtcaccgatatatttaagcttctccatgttttgcgggttaacaagaaaatttgctctgtcgcattttctccaaacaatccaccaaaaggttgccttgccaccttgtctctatctctgaataataacatgcttgagacatactcagtggataatgagaatgtgtcgaatatgtattccattgagatgcatggacaccgttctgatattaggagtcttgcacttaactcagaggacaacctcctgatgtcaacaagtcacaatgctgttaagatatggaatcctagtactggcgactgtctccggacaattgattctgattatggattgtgcagtgcatttgttcctggaaatcggtatgcccttgtaggcacaaagagtggtactttggagattatagatattaatagtggaagctctattgaggttatagaagctcatgctggttccatacgatcaattgtactcattccaaacgaggatggaactgctggtgcatggggttttgtcactggaagtgctgatcatgatgtcaagttctgggaataccaattgatgcagaaatctgataatgactctaagcagctgagcgtaacaaatgtcaaaactttgaaaatgaatgacgatgtccttgcagtaaccatcagtccaactgggaatcatattgctgttgctctcttggatggcgcagtcaaggtcttcactatggactcactgaagtttgcccttaccctttatggccacaaacttccagttctctgcatggatatatcatccgatggagttctaatagttactggttctgcagacaaaaatttgaaaatttggggtatggattttggtgactgccataagtctatatttgcccacacggacagtgtgatggatgttaagtttgtttctaaaacacattatatgttcagtgttgggaaagaccgcactgtaaagtactgggatgctgataaattcgagttgttgttaacactggaaggacaccatgctgaagtttggtgtcttgccatcagcagtcgtggtgattttattgtaacaggttctcatgaccgctctattcggcgttgggatcgtactgaagaacaactcttcattgaggaagagcaagagaaaaggttggaggaaactttcgaggctgatttagatagtgctatggaccacaagtatgggcaaaaagatggtgctcctgatgagggttctgtaggtgttcctggtaggaaaaccaaagagacagtaactgctgctgatgcaattattgatgcacttgacactgccgaggaagaagtaaaacgccttgatcagcaccaggaaggacaaaataatgggaatggaactacatttcaacccaatgttataatgcaagggcagtcaccatcggattatgttttgaatgtagtttcaaatgttcgtccaaatgacttggaacaggctctcctttcattgccattctcagatgcacttaagatcatgtcttacttaaaggagtggtctatggttcctttgaaggttgagcttgtttgtagggtttgcctagtgctgcttcaaacacaccacagccaattaactacgacaccatctgcaagatcgatacttacagaactgaaaggcattctttacagtagagtaaaggaatgcaaggatgctataggtttcaaccttgctgcaatggatcatataaaagaattgttggccatgagatcagatgctcccttccgagatgcaagagcgaagctgatggagatcaggcaggaacaatcaagacgatcggataggtcagatggggctgaaaaaaggaaaaagaaaaagcgaagaacatccggtgagagctga</cdnaseq>

Protein Sequence

<aaseq>MVKAYLRYEPAISFGVVASPESNVAYDPSGRLLLAAALDRFAAW DLKRGLPSLSFATAAPSPSLAVSCLATFPSAASASASSIASGHADGSIRLWDTETGSC EATLHGHRSAASALVFGPSGAIIASGSKDCDIILWDVVGQAGLYRLRGHRDQVTGLVF LDSGKKLVSCSKDKLIRVWDLDTQHCLQIVGGHRSEIWSIDVDPSERFLVSGSADQEL RVFTVRKSAEEGEDWSKWDMLKLFGEIPRQSKERVATVKFNKNGNLVACQVAGKTVDI YRVLDETEAARKAKRRMHRKKEKALAKSMAAEGNGTVIDPLSAQDLQNPTPVVTDIFK LLHVLRVNKKICSVAFSPNNPPKGCLATLSLSLNNNMLETYSVDNENVSNMYSIEMHG HRSDIRSLALNSEDNLLMSTSHNAVKIWNPSTGDCLRTIDSDYGLCSAFVPGNRYALV GTKSGTLEIIDINSGSSIEVIEAHAGSIRSIVLIPNEDGTAGAWGFVTGSADHDVKFW EYQLMQKSDNDSKQLSVTNVKTLKMNDDVLAVTISPTGNHIAVALLDGAVKVFTMDSL KFALTLYGHKLPVLCMDISSDGVLIVTGSADKNLKIWGMDFGDCHKSIFAHTDSVMDV KFVSKTHYMFSVGKDRTVKYWDADKFELLLTLEGHHAEVWCLAISSRGDFIVTGSHDR SIRRWDRTEEQLFIEEEQEKRLEETFEADLDSAMDHKYGQKDGAPDEGSVGVPGRKTK ETVTAADAIIDALDTAEEEVKRLDQHQEGQNNGNGTTFQPNVIMQGQSPSDYVLNVVS NVRPNDLEQALLSLPFSDALKIMSYLKEWSMVPLKVELVCRVCLVLLQTHHSQLTTTP SARSILTELKGILYSRVKECKDAIGFNLAAMDHIKELLAMRSDAPFRDARAKLMEIRQ EQSRRSDRSDGAEKRKKKKRRTSGES</aaseq>

Gene Sequence

<dnaseqindica>69..314#417..632#715..1806#2215..2337#2748..2929#3013..3244#3346..3555#3677..3805#4679..4747#5251..5373#5457..5507#5601..5750#gccataaaccctaaccgcagcgacgcactccacctcctcctccaccacgccgccggcggccgggcgccatggtgaaggcctacctccggtacgagccggcgatctccttcggcgtggtcgcctccccggagtccaacgtcgcgtacgacccctccggccgcctcctcctcgccgccgccctcgaccgcttcgccgcctgggacctcaagcgcggcctcccctccctctccttcgccaccgccgccccgtccccctccctcgccgtctcctgcctcgccaccttcccctccgccgcctccgcctccgcctcctcggtatcacacgctgaaccttcctccctttccccttttgcggtttaatctctccgcattttgagctggtttcatcatctcgtgcgctgtgttggtttgcttcagattgcgagtgggcacgccgatgggagcatcaggctatgggacacggagaccggctcctgtgaggcgaccctccatggccaccgctctgcggcttccgccctcgtattcggcccctctggcgccatcatcgcctctggcagtaaggactgtgacattatcctttgggatgtagttggacaggccggcctttatcgactccgtggccaccgtgatcaggtatactacattgtgcttctcttctctgtctctattgggtagcaaagttcagtcatactaatctggcgattactcgctgtaggtcacgggtttggtgtttctggattcagggaagaaactagtgagctgctccaaggataagttaatccgggtttgggaccttgacacgcagcactgccttcagattgttggtggccaccgcagtgaaatatggtcaattgatgtggatcccagcgagaggtttttggtgtctgggtcggccgatcaagagctgcgggtgtttacggtccggaaatctgctgaggagggtgaggattggagcaagtgggatatgctgaagctatttggtgagattccaaggcaaagcaaggaaagggtagcgactgttaagttcaataagaacggtaatcttgtggcatgccaggtggctgggaagacggtggatatttatagggttcttgatgaaacagaggcagcacggaaggccaagaggaggatgcacagaaagaaggagaaggctttggccaaatccatggctgctgaagggaatggtactgttatagatcctttgtcggctcaagacttgcagaatcccactcctgttgtcaccgatatatttaagcttctccatgttttgcgggttaacaagaaaatttgctctgtcgcattttctccaaacaatccaccaaaaggttgccttgccaccttgtctctatctctgaataataacatgcttgagacatactcagtggataatgagaatgtgtcgaatatgtattccattgagatgcatggacaccgttctgatattaggagtcttgcacttaactcagaggacaacctcctgatgtcaacaagtcacaatgctgttaagatatggaatcctagtactggcgactgtctccggacaattgattctgattatggattgtgcagtgcatttgttcctggaaatcggtatgcccttgtaggcacaaagagtggtactttggagattatagatattaatagtggaagctctattgaggttatagaagctcatgctggttccatacgatcaattgtactcattccaaacgaggatggaactgctggtgcatggggttttgtcactggaagtgctgatcatgatgtcaagttctgggaataccaattgatgcagaaatctgataatgtgagtcttctgtctaatcccttggcatcgtctgttctcctatgactctacagaagtgtctgtttttcttaaccaagtctccattatttatatgccaagaagaacaacaatttattgtgatgcatctcttaatgacattcttttggtttattttgcgcctgcaagtttactaaccagttctccacatgaagaggcatgttttgccaaatttctaaatgatgttacacagaaatataaaaattcaatgtcaaagaatttcttgtgttgcactgtttttgatgtaatgaatgcgcaagatcatcgatctatctgttctagttgaactttcaatgttaatctgataagcatcataaatatcgtctgcataggcttttagaataactttagtgttttctcatcttgttccaggactctaagcagctgagcgtaacaaatgtcaaaactttgaaaatgaatgacgatgtccttgcagtaaccatcagtccaactgggaatcatattgctgttgctctcttggatggcgcagtcaaggtttgtatggttttgaacttctctagaaaatgaactacattctttttagtggggacctttatgtgaacacaaatttggggcttatttttatgattatgtattgtgtatatagatagagagcatgattctttacttccttgtccataaaatttttagttttctaatttagaacaggacaagcataagcaaatatctattttccgccagtcagtttatatgggcaaagctattattgttaatattttcttggcatcctgcaaacttggtaacgcagtaagcacttgtactgaactttttttatatcttgaggtgccagttggcatcctgcaaacatggaaataaaaatgcaatctagaattaagtttttgatttcatcaatttcctcaacatcttgtgctgtgtgtttgcaggtcttcactatggactcactgaagtttgcccttaccctttatggccacaaacttccagttctctgcatggatatatcatccgatggagttctaatagttactggttctgcagacaaaaatttgaaaatttggggtatggattttggtgactgccataagtctatatttgcccacacggacaggttatttcttgcccttttgttttctttgtgatttgactgttggcacaatccttacacctttttctcacgtgttcaatttgcagtgtgatggatgttaagtttgtttctaaaacacattatatgttcagtgttgggaaagaccgcactgtaaagtactgggatgctgataaattcgagttgttgttaacactggaaggacaccatgctgaagtttggtgtcttgccatcagcagtcgtggtgattttattgtaacaggttctcatgaccgctctattcggcgttgggatcgtactgaagaacaactcttcattgaggtatgcagtgattgtattgttttaatggaatcctgttattgaatgtttgctatctttgcttagatttttcttagctctgaaacccacaaaaataaatgcaggaagagcaagagaaaaggttggaggaaactttcgaggctgatttagatagtgctatggaccacaagtatgggcaaaaagatggtgctcctgatgagggttctgtaggtgttcctggtaggaaaaccaaagagacagtaactgctgctgatgcaattattgatgcacttgacactgccgaggaagaagtaaaacgccttgatcagcaccaggtattaaaaagtgaaactaaaaacataatgtgcaacccttgttgctattctgttactgctgttaaatgatgactcaccaagtggaatatttacttcagctatacatttattataatttcaggaaggacaaaataatgggaatggaactacatttcaacccaatgttataatgcaagggcagtcaccatcggattatgttttgaatgtagtttcaaatgttcgtccaaatgacttggaacaggctctccttgtaagtttttcccttatcttccctaatggatgacatcattcctttagttttgtcctgtatttctcacagaacggctttcagggaaaagccaccatcaattatttgttgttatagtaaattactagccaatatttgtagtgtggtgatccattttatgcattgagtatcatctaatgtccacgtattccaccgatgccccactgacatgtgggcccagggccatctggcaaccttgctgtgagtggtatattgtagattttttttagggaagatatggatgaaactcactgatatagggcttgtttggtttagtgccataccaaaacattggtagtgccaaaatctaggcatatggcactaccaataatttggtagggtggagttctaagtaatgtgtttggattgataccaattagaagccaaattttatgttatggtgaagaaagtcctagaattataccaaattaagcatgtgcattaccatccatttggcttcaaaccaaaccatcatatttactattcaaactaccaaaaaaattggcatggcacattttggcatcaatccaaagtggcccatgattgcccctattgcaaaggaaacaaaattcaactgataggatgaattccaacttcaacaagactgcacacgtaagaaaggctttctggaaccataaagtgtcatgccctactggggtagtatagaacacaattctttgattttgttcaatctggccttgttgttttagtacataaccatattgtcaagcatattgattgtgttcgttagcatatttaaaaaaccactaaacagattcatccttgtatattaatcattcatcatttgattatatatttatgttttccctgcaacagtcattgccattctcagatgcacttaagatcatgtcttacttaaaggagtggtctatggttcctttgaaggtaaaatgctagtacttcattgctctctatactagttatgtcataaatgtaatttacctgtcaactttctcagtttccaatcctatgactgcaatagacattccattctagttcattttactgcgagttttcgagtgttgtttgtcagaaaccactttctttgttctcagctagaatcgcaccattcctatcacaagccatttcataactagcagtctagctgtctctcttcaagttcaaaattgtgagtttttttatgtgcatgaatacccaggacgtaaaaaaatgtgtagtccataatggctaggtttacgctgattcatggaagttgtttaagctactgtttacattaaaaaattacagagatattgggtcatcactggtggcttcatggattttgttgattaattcagttccacacgtttgtgttactctattttatattgacctaattgttccataccctcatctgcacaaatcctgatgtctgttgtacgctgcaggttgagcttgtttgtagggtttgcctagtgctgcttcaaacacaccacagccaattaactacgacaccatctgcaagatcgatacttacagaactgaaaggcattctttacagtagagtaaaggtaacttttggttacttttgttatctcccgttatacctttcgcagcaacctggtaatgtatttatgtgatgttcatcctttaggaatgcaaggatgctataggtttcaaccttgctgcaatggatcatataaaagtaagattccgccttttccatcaaaaactccttttccatcaaaaactcttgctactagttcttaactttgatgtgaaatccctcttctgctaggaattgttggccatgagatcagatgctcccttccgagatgcaagagcgaagctgatggagatcaggcaggaacaatcaagacgatcggataggtcagatggggctgaaaaaaggaaaaagaaaaagcgaagaacatccggtgagagctgagctttgtgggcgaggcaaagtagttttttttttgtcgtagcatacaaacgatatatcggcgtgctcatattgtgtctacatgagcacgacagaattttggcatatcgagtgtaaaatcaaaacgcgcgttgcgccaaatcttttagatgtaatagcagaatgtgcatttgctcaatcctacgtactccctccgggttaataatatttatcgttttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0151700, RefSeq:Os03g0151700