Os03g0162000

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0162000| Description = Similar to Dimethylaniline monooxygenase-like protein (Flavin-containing monooxygenase YUCCA)| Version = NM_001055583...")
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Gene Name

Os03g0162000

Description

Similar to Dimethylaniline monooxygenase-like protein (Flavin-containing monooxygenase YUCCA)

Version

NM_001055583.1 GI:115450894 GeneID:4331709

Length

5408 bp

Definition

Oryza sativa Japonica Group Os03g0162000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3333377..3338784

Sequence Coding Region

3335784..3336464,3336862..3337110,3337841..3337963,3338075..3338287

Expression

GEO Profiles:Os03g0162000

Genome Context

<gbrowseImage1> name=NC_008396:3333377..3338784 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3333377..3338784 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggggcagcagaagcagaatgcaggtggtggtggtggtgacaatgcgagcccttgcattgtgctggatgggcccatcatcgtcggcgccgggccgtcggggctggccgtggcggcgacgctccggcagcacggagcgccgttcaccgtggtggagcggtccggtggcgtggccgacctgtggacgaaccgcacgtacgaccgcctccgcctccacctccccaaggtgttctgcgagctcccccacgtcgccttcccgccggacttccccacctaccccaccaagcacgacttcctccgctacctccactcctacgccgcccgcttcgccatcgccccgctcctccgccgcaccgtcacccgcgcctggtacgaccacccggcctccctgtggcgcgtgacgacgacgacaacgtcgtcgtcggcgacgtctgtgatcaccgagtacgcgtcgccgtggctggtggtggcgagcggggagaacgcggaggtggtggtgcccaaggtgaaggggagggagaggttcgccggcgaggcgctgcactcgagcgagtaccggagcggggagaggttcaggggcatgagggtgctggtcgtcggctgcggcaactctgggatggagatgtgcctggacctctgcgagcatggcgccatgccgttcatgtcggtcaggagtggtgtgcatgttctaccgagagagatgtttggggcctcgacatttggtatagcaatgaagctgttgagatggctgcccatcaagatggtggataggtttctactcctcgttgcaaggatggtgctgggagacaccgagaagtatggtctcaagaggcccaaactgggcccattggagatcaagaacatcaccggcaagagccctgttctcgacgtgggagcatggtccttgatcaaatcgggaaacatcaagatagtaccggaggtggagtcattcagcggcaacggggcgaggttcgtggacggcaacgagatggcgttcgatgccgtcatcttcgccaccggctacagaagcaatgtcccctcctggctccaggaggacggtgagttgttcacggaggagggcaagctgaggagcagcggcagcagcagtgagtggaggtggaggggtccaaacgggctctactgcgtgggattctccgggcggggcctgctcggcgctggagcagacgcgctgcgagctgccgccgacatcgccgggaggtggcaggagacgcagcaggcagcagccaacatctcctcggtgtag</cdnaseq>

Protein Sequence

<aaseq>MQGQQKQNAGGGGGDNASPCIVLDGPIIVGAGPSGLAVAATLRQ HGAPFTVVERSGGVADLWTNRTYDRLRLHLPKVFCELPHVAFPPDFPTYPTKHDFLRY LHSYAARFAIAPLLRRTVTRAWYDHPASLWRVTTTTTSSSATSVITEYASPWLVVASG ENAEVVVPKVKGRERFAGEALHSSEYRSGERFRGMRVLVVGCGNSGMEMCLDLCEHGA MPFMSVRSGVHVLPREMFGASTFGIAMKLLRWLPIKMVDRFLLLVARMVLGDTEKYGL KRPKLGPLEIKNITGKSPVLDVGAWSLIKSGNIKIVPEVESFSGNGARFVDGNEMAFD AVIFATGYRSNVPSWLQEDGELFTEEGKLRSSGSSSEWRWRGPNGLYCVGFSGRGLLG AGADALRAAADIAGRWQETQQAAANISSV</aaseq>

Gene Sequence

<dnaseqindica>2408..3088#3486..3734#4465..4587#4699..4911#gtattttattcgcaacgtgcggttcttccagtttctcggcgcctcggcggtgcccgcgcagcgatcgaggggaaattcctgagagttaaattcgttgaatcttaccatcttgtttgttatgattggatccatttgcccttgcatgcttgattttgcaggtgtgggcgaaggggaagcctcgaagtgcaaagccgcccctgcttgcacgcgatgtgttcggtgaaatgcctctgggacgcacaggtgtcatttcccgaggaagctctgttctcgtaacattttgaggtagaggtcactgattctgattttttaacacgatgttttaagcaagaagttaacttttctcagcaactcgatctaacttttagggagatgcacattgccagtggtgctactacagattactgaaccataggcgctctatgctgtgaaaaggtaaatccagtaatgctgtccgctgttctccacaatttttctgaaattggtagcattatgtctgctttgtgggcattgatgtgccactgccgcctacagtcaaagttaaaatcgacgggatctccatgttcctgacacggcaaattcttcgattcgaatgaaatgtttgctttagcatcctaaagaaattcttttgttatatttatttttcttttaatcaataatcagttatgccaacacggtgcacaacctacaaacagggcagctaaaatttcaatcaaatggatcaggagcaccttctgacattgaatgcttgcacgtcatggaatgtggttaatgtgatcaactgatcatccatgtgctgatgggatctttaagtagctgctttgtgtccatcaccctatctgtcaacatcgtagagttcttcaccatatcaactttgaggtgtttcagattctttttatttggttgctgtcatagttagtggagacaatggggatatccaggcaaggaatctgaagagtatgtaacttctactcacgcgcatcaaaatttcagtatctcatcttttactgcctgcttatctggtgagatattataagagggaggactcagtaaactcctctaaaaaatggttcgaagtaaaccatttcaattattcagctcagtacgcaaaacaatgaggctggctttaggtatgtatccttcctccctgcttccactgtaacagttcattagtctaagtgaaattatttagcaattaggtcctaggtaactagctgagtagactaataaactaggctctaaaaatcttctggatcttattttgtagcagaaggggttgaccaggactgctctgtcaaagagcagaatgtccttaacatcagcactgcctgcttgcaaattatatgcttacatggtatgtctcttgctctcttcattagtcattacaaaacagtgttcgtagagatgcatacttagatccatgctattgttgcccaaatagaaaaaaaaaattatgattaacatcgtaacatgttctgtagaattaatgggtatggaagcattatcagtatataccattgatagactagctagctgattcgcccctccttccagaaaacagagaagtgattggttgaatgtactcatgaaagtcgcaaaccaaggaccactatggaggcttcaccttaagatatgcatatctaacactggaaactatgttcatgcattggctggcaatggcacatacatggttggttttgtcaaagtgcattgcatgacaagatctcatacgatttgatctctgggttctaggaatgcctaagatgcatgcaaagtttacttctagaaaaacccaaataaaaaaaagataatattagaagtatatacactatttccctttttttcttcattgtcctgaaaagattggtggcaatcattccaacagtagtgacagaactcataaaaatagccctgtacaatgtaaggtgtcccccttgtacattcagtcattcacttccccttatatataggggagagactagagagggaccctcaccctgagctcattgaggtggccaaataggttctgatcacacctttctcctcctccatgcttactacactggcactgtagtgcatgcaagaggagaggcaaaaagatgatgatgtccttagcagcttaggttgtggctacctagctcttcaactagcttcttcccagaatccacatagagaggcagagctatatagcagagtaggaagatacatacacacacatatgcatataattcctagctctagctggtgctagctccataggagatgtgtccattccattgcagtgccacgagctcgctagctagctgctagctcttcgtttccaagagtagtgtttgtttccaagaggccagagtgatcgatcgagcttagctcatcggttcttgggccatcgatcgatcgaccgatcatgcaggggcagcagaagcagaatgcaggtggtggtggtggtgacaatgcgagcccttgcattgtgctggatgggcccatcatcgtcggcgccgggccgtcggggctggccgtggcggcgacgctccggcagcacggagcgccgttcaccgtggtggagcggtccggtggcgtggccgacctgtggacgaaccgcacgtacgaccgcctccgcctccacctccccaaggtgttctgcgagctcccccacgtcgccttcccgccggacttccccacctaccccaccaagcacgacttcctccgctacctccactcctacgccgcccgcttcgccatcgccccgctcctccgccgcaccgtcacccgcgcctggtacgaccacccggcctccctgtggcgcgtgacgacgacgacaacgtcgtcgtcggcgacgtctgtgatcaccgagtacgcgtcgccgtggctggtggtggcgagcggggagaacgcggaggtggtggtgcccaaggtgaaggggagggagaggttcgccggcgaggcgctgcactcgagcgagtaccggagcggggagaggttcaggggcatgagggtgctggtcgtcggctgcggcaactctgggatggagatgtgcctggacctctgcgagcatggcgccatgccgttcatgtcggtcaggagtggtgtaagtactaacgactacttgctactctaccactcttcatgctcacttgcatcatatatatctctctcttctccaaactagctgatatatatattattgatcttataaatgatccaactaacagcgtgcattttccacttggcattttaaattgctccttttttcgataatggatatatcagttaatctagcttctacatccgagatgcatatatgatgtatccgcccgcttcgcatttttctcttttatgtaacaatgtaaatactttggtcaagtaaaacaagcatttttttccccagttctctagtacaaatattactttttttaaaaaaaaaagtatcaatattctattcattgacatattattcatatatgtttgctgcaacaatggaacaggtgcatgttctaccgagagagatgtttggggcctcgacatttggtatagcaatgaagctgttgagatggctgcccatcaagatggtggataggtttctactcctcgttgcaaggatggtgctgggagacaccgagaagtatggtctcaagaggcccaaactgggcccattggagatcaagaacatcaccggcaagagccctgttctcgacgtgggagcatggtccttgatcaaatcgggaaacatcaaggtatatgaatatgtggtcacctgtctctctctcttatctatctctctctccggaaagttggatggaagtaagcgtcaatggagttaaaaggcttctttcgcataccatgccaaatcctactttcacttttgaggtttccacaacattctccctagcttgtttgcgagtagtaactgggaaaaattacagttttatctgctccttggcctgatggttccttggattttaccctcttcctggaatcctgatgcaggagcaggacttgcatttgtactttagggagataccatatacgtagctttcatgtagttgacgatcgaagggaggcattattaagcatggaaacaaaatagacaccggagaaaaacaaagaggaagcattgtattataggatcatcttctttattttacataatgaaatgaaataatagctagacttatagctttgcactgaactctattgcaagtagtagcaacaagttgagtagtattaattgtgtccgtctcagaaagaaagaatgtacgataattctggctatgcatctggacaacgatcgttctttttgaaatgggtcgaggtagtagtagtactactgcagagtggtgtacattccgtttgacttgaggccggcccggccgggctatctctcacatatgtccgtataatgtgtatgttgtgcatgtgcacctctgatgcctcttgtgctgtaacaaacgcatatgcatgcagatagtaccggaggtggagtcattcagcggcaacggggcgaggttcgtggacggcaacgagatggcgttcgatgccgtcatcttcgccaccggctacagaagcaatgtcccctcctggctccaggtttacacatacatatatatatctctctgtatagctagactgtagaatgaatgcagttaaggcaatgttgctgatcgataccagtactgtgcttgtgatatgtatcatcaggaggacggtgagttgttcacggaggagggcaagctgaggagcagcggcagcagcagtgagtggaggtggaggggtccaaacgggctctactgcgtgggattctccgggcggggcctgctcggcgctggagcagacgcgctgcgagctgccgccgacatcgccgggaggtggcaggagacgcagcaggcagcagccaacatctcctcggtgtagtcgtccacaggccggatcgaggacggacgggacggacggtgcatgctgcgctgtgcacacaggctcagctacctcagctgctgctgctgctgctgctgatggcctctcgctcgcatgcatggcaacatggcataggtagccatggccggagtcgcatgcattgcaaatattccacagctcgcgagctcacatctgttgctagctagcgagcagcagcggccggctggtgaccagcgatggcgctggtgaccagcagcagcgagcagatgcacagagatcatatgtagtcgatgcatgggagaggaggaggaggaggaggaggggtgtgtgtgtacgtgtatgtgcagtgcaggtgggttgtgacaaagttttgcataggatgttgcttgtctgatgcgccccatgcaatgcagatacggctgaaagagtgcagtcgttttttttgtttttataattttggtccagggctgcaggccgtgatgatgtctgcattacgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0162000, RefSeq:Os03g0162000