Os03g0167600

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0167600| Description = Similar to Male sterility protein 2| Version = NM_001055618.1 GI:115450964 GeneID:4331746| Length = 3361 bp| Defini...")
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Gene Name

Os03g0167600

Description

Similar to Male sterility protein 2

Version

NM_001055618.1 GI:115450964 GeneID:4331746

Length

3361 bp

Definition

Oryza sativa Japonica Group Os03g0167600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3632045..3635405

Sequence Coding Region

3632413..3632728,3632822..3632925,3633036..3633235,3633353..3633453,3633572..3633785
,3633899..3634060,3634173..3634254,3634334..3634761,3635044..3635263

Expression

GEO Profiles:Os03g0167600

Genome Context

<gbrowseImage1> name=NC_008396:3632045..3635405 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3632045..3635405 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatgagttcatgcgtgaacctatcccgtgtcgccgccgccgccgcagggagacggccgggatttgccggtgagctgggaggtcgccgtggtcatggcagaagcgtgcttccggttgttgctgcactgccggtgaggaggaagggaagcggttgtggcgtggcgtgctgcgtctcctcctcgtcttcctcctccgtgcacggcaagaactcggcggcggcggcggagggtcacgccggcggcattgggatcgcggagttcctcggcggcaagaacttcctcatcaccggcggaaccgggttcctggcaaaagttctcatcgagaagatattgcggacgaatcccgacgttggcaagatctacgtgctgatcaaggcgaaggacggtgacgcagcactgaaaagattgcacaacgaggttgtggacacagaattgttcagtcgtttgcaggaaatccatggcaaggattaccacagcttcgcggcaagaaagctggtgcctgtagtcggagatgtcagagaagccaacgttggcatcgcccctgagcttgccggcgtgatcgccgacgaggtcgacatcatcgtcaactcagcagcaaacaccactttcgacgagaggtacgatgttgcaatggacatcaacaccgtagggccattcaggataatgagcttcgcgcagcggtttcggaggctgaagctgttcttgcaagtgtcaacagcatatgtgaacggacagaggcaaggtgtggtgctagagaagccatttcgcttgggggacaccatagccaaggagttaggatctccagattcttcacaacacaagaacaccatgcttgacatcgaggcagagatcaagctggcttttgaccacaggagacacggtgatgattcagcctctttctctgaagaaatgaaagagttaggattagagagggcaaaactccatgggtggcaagatacatatgtgttcaccaaggccatgggagagatggtgatcaactccatgcgaggagatataccggttgtcaccatcaggccaagcgtcatcgagagcacctggagggatcccttccccggttggatggaagggaacaggatgatggatcctgttgtgctgtactacggcaaaggccagctgagcgggttcctcgctgacccggagggtgttcttgacgtggttccggcggacatggtggtgaacgcaacgctggcgtccatggcgaagcacgggcgcggcggcgcggcggcggcggcggcggcggcggaggggatgcacgtgtaccacgtggcgtcgtcgacggtgaacccgctggcgttcggcgacctgagccggttcctcttccagcacttcacggggtcgccgtacagcgacgcggcggggcggcccatccacgtgccgccgatgcggctgttcgacaccatggagcagttcgccagctacgtcgagaccgacgcgctgctgcgcgccggccgcctcgccggcgccggcgccggcgccggagacgagagggtgtcgcagcggctgcgcgagctctgcgccaagtccgtcgagcagaccatctacctcggcagcatctaccagccctacaccttctacggcggcaggttcgacaatgggaacacggaggcgctgatcggggagatgtcggaggaggagaaggcgcggttccacttcgacgtgaggagcatcgagtggacggactacatcaccaacgtgcacatcccggggctcaggaagcacgtcatgaaggggaggggcgtcggcggcggcagcggcgcgtcgtcgtcatcgaacgcctcgctgctcgccggcgcctccgtttga</cdnaseq>

Protein Sequence

<aaseq>MGMSSCVNLSRVAAAAAGRRPGFAGELGGRRGHGRSVLPVVAAL PVRRKGSGCGVACCVSSSSSSSVHGKNSAAAAEGHAGGIGIAEFLGGKNFLITGGTGF LAKVLIEKILRTNPDVGKIYVLIKAKDGDAALKRLHNEVVDTELFSRLQEIHGKDYHS FAARKLVPVVGDVREANVGIAPELAGVIADEVDIIVNSAANTTFDERYDVAMDINTVG PFRIMSFAQRFRRLKLFLQVSTAYVNGQRQGVVLEKPFRLGDTIAKELGSPDSSQHKN TMLDIEAEIKLAFDHRRHGDDSASFSEEMKELGLERAKLHGWQDTYVFTKAMGEMVIN SMRGDIPVVTIRPSVIESTWRDPFPGWMEGNRMMDPVVLYYGKGQLSGFLADPEGVLD VVPADMVVNATLASMAKHGRGGAAAAAAAAEGMHVYHVASSTVNPLAFGDLSRFLFQH FTGSPYSDAAGRPIHVPPMRLFDTMEQFASYVETDALLRAGRLAGAGAGAGDERVSQR LRELCAKSVEQTIYLGSIYQPYTFYGGRFDNGNTEALIGEMSEEEKARFHFDVRSIEW TDYITNVHIPGLRKHVMKGRGVGGGSGASSSSNASLLAGASV</aaseq>

Gene Sequence

<dnaseqindica>369..684#778..881#992..1191#1309..1409#1528..1741#1855..2016#2129..2210#2290..2717#3000..3219#gatggcctcctcctgcaatctgcaagactgaagctaagcagctttaaatcctcctgcgtcatttaaccccctctctgcctctctgagctctgagctgctcagctacagctccctagctgttctgttcgattaattcagcttcgctttgcttggattaatttgtaggtgactaactcgatcacagctcaggtgattggcagtttgatcacaaggcaggaaggaagtagaagtagattgctgtagcacacgctcacctaccaagcttctacactcgcagccaagctttgatcgtttgcttgctttgcattgcttgggctttgtgggcaagaacgtgtctatcttcttcttgttcgtctcgtcaggcggccatggggatgagttcatgcgtgaacctatcccgtgtcgccgccgccgccgcagggagacggccgggatttgccggtgagctgggaggtcgccgtggtcatggcagaagcgtgcttccggttgttgctgcactgccggtgaggaggaagggaagcggttgtggcgtggcgtgctgcgtctcctcctcgtcttcctcctccgtgcacggcaagaactcggcggcggcggcggagggtcacgccggcggcattgggatcgcggagttcctcggcggcaagaacttcctcatcaccggcggaaccgggttcctggcaaaaggtagtaaatctatcttcttcctctcttaaatttggatcatccaacgtacgtagctcgcgtctcttcttgattttgcttgatcatctggatcagttctcatcgagaagatattgcggacgaatcccgacgttggcaagatctacgtgctgatcaaggcgaaggacggtgacgcagcactgaaaagattgcacaacgaggttctacttgcgatcattgttcgatccatttcagagaaacatttgttagtacctatctgttcatctgtttgactgtatttttccttttgttttaactgtgtgatgtgcaggttgtggacacagaattgttcagtcgtttgcaggaaatccatggcaaggattaccacagcttcgcggcaagaaagctggtgcctgtagtcggagatgtcagagaagccaacgttggcatcgcccctgagcttgccggcgtgatcgccgacgaggtcgacatcatcgtcaactcagcagcaaacaccactttcgacgagaggttttgtcattctctgaactgcagtgttgctccaaagatgagttcttaattggatcacttcatgtataataagcatatgaattgatcactgttgctgcatttggttcgattttgcaggtacgatgttgcaatggacatcaacaccgtagggccattcaggataatgagcttcgcgcagcggtttcggaggctgaagctgttcttgcaagtgtcaacaggtcagaaatgcatgtcaaatgaaaagctcttgtgctgaaaacttgcactgaaattacctccaaaaaccttagatatatctctctactgtggattttgaatttcatgtttggcaatcagcatatgtgaacggacagaggcaaggtgtggtgctagagaagccatttcgcttgggggacaccatagccaaggagttaggatctccagattcttcacaacacaagaacaccatgcttgacatcgaggcagagatcaagctggcttttgaccacaggagacacggtgatgattcagcctctttctctgaagaaatgaaagagttaggattagagaggtatacacgcaatgccagaaacgtttcaagtctgaatgtgcagtggcaagattatgcaattgcacacatgaaacagcattggttaattcgcttgatttgggtttaatttgtagggcaaaactccatgggtggcaagatacatatgtgttcaccaaggccatgggagagatggtgatcaactccatgcgaggagatataccggttgtcaccatcaggccaagcgtcatcgagagcacctggagggatcccttccccggttggatggaagggaacaggtacaaattgtaaatcaaagttcaccaacttaaaccaattttagttcatgagataatttagtttacgatgaattggcattgattttggcgaaatgaatttgagcttgattaggatgatggatcctgttgtgctgtactacggcaaaggccagctgagcgggttcctcgctgacccggagggtgttcttgacgtggtaatgattaagcagatgattaaattcgctaattgcgattagtggttaatcgattaactatggcgatttgtgatggaaggttccggcggacatggtggtgaacgcaacgctggcgtccatggcgaagcacgggcgcggcggcgcggcggcggcggcggcggcggcggaggggatgcacgtgtaccacgtggcgtcgtcgacggtgaacccgctggcgttcggcgacctgagccggttcctcttccagcacttcacggggtcgccgtacagcgacgcggcggggcggcccatccacgtgccgccgatgcggctgttcgacaccatggagcagttcgccagctacgtcgagaccgacgcgctgctgcgcgccggccgcctcgccggcgccggcgccggcgccggagacgagagggtgtcgcagcggctgcgcgagctctgcgccaagtccgtcgagcagaccatctacctcggcagcatctaccagccctacaccttctacggcggcaggtttgtttcctagatcgttcgttttatttaaaaacttttgtgaaatatataaaactatatgtatacgtataaatatatttaacaataaattaaataatataaaaaaattaataattacttaatttatttctaataaaactaatggtcaaatatatttaaaaaagtcgatggcataaaatattttaaaacgggggagtatattcgtatatacccgccatggataatgcattgtgaatttgagatgctgatgagctcgatcgccggccatggcggcggcggcaggttcgacaatgggaacacggaggcgctgatcggggagatgtcggaggaggagaaggcgcggttccacttcgacgtgaggagcatcgagtggacggactacatcaccaacgtgcacatcccggggctcaggaagcacgtcatgaaggggaggggcgtcggcggcggcagcggcgcgtcgtcgtcatcgaacgcctcgctgctcgccggcgcctccgtttgaatggccaggccggcgccggagaagaggaggatgcatgcgcggcgtgtacactaggctagattgttgttaacttgttctgccgtggcagtctgacagatgatctttgtgctgcagtaattaaggttgatagtatgttatctct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0167600, RefSeq:Os03g0167600