Os03g0168200

From RiceWiki
Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0168200| Description = Conserved hypothetical protein| Version = NM_001055623.1 GI:115450974 GeneID:4331752| Length = 2136 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0168200

Description

Conserved hypothetical protein

Version

NM_001055623.1 GI:115450974 GeneID:4331752

Length

2136 bp

Definition

Oryza sativa Japonica Group Os03g0168200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3659436..3661571

Sequence Coding Region

3659548..3659905,3660561..3660660,3660753..3660873,3661017..3661112,3661218..3661340

Expression

GEO Profiles:Os03g0168200

Genome Context

<gbrowseImage1> name=NC_008396:3659436..3661571 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3659436..3661571 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcttgcttgccatccctctcaccgccgccgcatcaggcgccggtgccggcggcgacgaccgcgctggcggggaacctgacctcgtccctcctctccctgcccccgccgctgccccgcctcgccgtctcgcaccgcagggcggtggtcgccgcggcctcgtcccggcccccgcccccgccatcgcgggaggggggtgatggtggtggtgaggaggaggaggaggtggagagggcgatggggatggacggcggcatccctggcacctccggcgagttcctgcgccgcgtctcctcccgcgcgtacggcatgcggcgccacctcatggaatcgctcgactccctcgcctacgatgtgttggagacaaacccatggagagaagactccaaaccagtctatgtactggctagaagagataaccatctatggacaatgaaaacccgtaggagtcgcagtgaagttgaaagggaacttggaatgctcttaaagggagggggttcaggagttgggactaaatcaaaatactctggttccaagtttaacatgcttgttgaagatatcagagagggaatactggtatttgaagacgaggacgatgctgcaaaatactgtgacattctacagggtggcggccaaggttgtgaggggattgcagagatagaggcatcatcggttttcaacatctgccataaaatgaaagctcttgccgtccttttccgtcgtggtaggacccctccattgcctcaaagccttgagcgcgacttaagggcaagaaagagatcattggaagactag</cdnaseq>

Protein Sequence

<aaseq>MAACLPSLSPPPHQAPVPAATTALAGNLTSSLLSLPPPLPRLAV SHRRAVVAAASSRPPPPPSREGGDGGGEEEEEVERAMGMDGGIPGTSGEFLRRVSSRA YGMRRHLMESLDSLAYDVLETNPWREDSKPVYVLARRDNHLWTMKTRRSRSEVERELG MLLKGGGSGVGTKSKYSGSKFNMLVEDIREGILVFEDEDDAAKYCDILQGGGQGCEGI AEIEASSVFNICHKMKALAVLFRRGRTPPLPQSLERDLRARKRSLED</aaseq>

Gene Sequence

<dnaseqindica>113..470#1126..1225#1318..1438#1582..1677#1783..1905#acgttccactcttctcttctcccgattttactcccaactttttttttcctctctctctctctctcgattttctcatctccactgctccacgcttccagggaagaacgtagaaatggcagcttgcttgccatccctctcaccgccgccgcatcaggcgccggtgccggcggcgacgaccgcgctggcggggaacctgacctcgtccctcctctccctgcccccgccgctgccccgcctcgccgtctcgcaccgcagggcggtggtcgccgcggcctcgtcccggcccccgcccccgccatcgcgggaggggggtgatggtggtggtgaggaggaggaggaggtggagagggcgatggggatggacggcggcatccctggcacctccggcgagttcctgcgccgcgtctcctcccgcgcgtacggcatgcggcgccacctcatggaatcgctcgactccctcgcctacgatggtaagagttgtcggatcctcaccctcttttcgtggatcgtatccgttcttgatcgattattaaggagtaaaagaaaaaaaatcttcgatcgatttaggggttttagtttttactagggggtttaccgagatcgctcgataaactgcgttctccatactcttgaagtgtccgaagatttcatctttatctgtttgatttggcatcagcaccaacgacgtgaggcttgtacgtgcacgcgtacataccgtatttcgtgatatacgtgtgattcgaggtttgcctagttaagacttaagagcatgcgtgtacgtgacaattaacagtaacaatctctagctgtttccacagtttttggctctgctcaatgtatcgagatttgaatgttgacatgtcattgtaacaaagtgctgaattgacatgtatgctgtagtaaaacataccatcctgcattcagtagtatcagaaacactgatccccactccctagttaagctttatattttaacactttgatttttcaatcaaagatcggttagaaatggtgttcaaaagatttatgcttttagaaatgctgttttctttgtatgctttgctaaactgttttacaagcatggcagtctgaaattttactaactggtgtttttcttctggttcagtgttggagacaaacccatggagagaagactccaaaccagtctatgtactggctagaagagataaccatctatggacaatgaaaacccgtaggagtcgcaggttagagttattttgctgctgttgcgcttacacgtgtaattttgctgttactgaacattctgaacaagtcatgttatctctattttcttcagtgaagttgaaagggaacttggaatgctcttaaagggagggggttcaggagttgggactaaatcaaaatactctggttccaagtttaacatgcttgttgaagatatcagagagggaatactggtgagtagttaaagagaggggttaaattttgtggatgatttctttgagaaccgactaggtgtcctgcttttcctctgggttttcagttgtttacatagctacttgcttgacattctcttgaatcatatcatcctttgtctcaggtatttgaagacgaggacgatgctgcaaaatactgtgacattctacagggtggcggccaaggttgtgaggggattgcagagatagaggcatcatcggtaagaaatttggtggacatgggccttcatagtaccaatttgtggttggcaattgatcatagtagtagtacttatgtaccgggttacactcgttcttgtctgcaggttttcaacatctgccataaaatgaaagctcttgccgtccttttccgtcgtggtaggacccctccattgcctcaaagccttgagcgcgacttaagggcaagaaagagatcattggaagactagagtctttctgatacatagtatagaacttctaattgtatattcgtctagctgttgaagcaaaggccctaggccctgtatactacgtggtatgtagatccacaatagcacgtggtacatacatccacaatagcctaagaggaaaggaagtcaaatctgacagaaaacatgtccaatagctcgagatattaacaatctcagtaaattgattattcttgccattatgtacattct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0168200, RefSeq:Os03g0168200