Os03g0173700

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0173700| Description = Conserved hypothetical protein| Version = NM_001055657.1 GI:115451042 GeneID:4331786| Length = 4138 bp| Definition ...")
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Gene Name

Os03g0173700

Description

Conserved hypothetical protein

Version

NM_001055657.1 GI:115451042 GeneID:4331786

Length

4138 bp

Definition

Oryza sativa Japonica Group Os03g0173700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3915017..3919154

Sequence Coding Region

3915215..3915223,3915813..3916245,3916384..3916468,3916586..3916748,3916820..3916887
,3917572..3918928

Expression

GEO Profiles:Os03g0173700

Genome Context

<gbrowseImage1> name=NC_008396:3915017..3919154 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3915017..3919154 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcccgaagaatcatgaatcgcgaatccttcaatcccccctccctacccaatctcgccgcctcccgctgctggccggagtcggtaattctggctaaccgggcgtacatcgccgactgcaagaaccctacaaccgcaacagcgcagtcaagagatggtcacaccgtgcaaatctctttctgcttcgccgaggcgcctgtgatctcatatttctgtgcgcactgctacaatcccagggttaaggttgagttcttcaccgagcccatcatagtggccggggaaggtgcttttgtcgtcctccgcgttcacttatcctcgccgttgctctctgaattcttcatctacagggcgggtccagggttgccatcactagagcgggttcaagatcccacaggttataattctcctatcttttacctttctttgctaggcatagcatcttgtgacaatgatgatgggggaagctgtttacttgttggttttcgcaaccgtttgacccactatgaagtttacgtctacacttccaccaccaagacttggagcacgagaaagttggatctgtctcctggaattagggctattcgacctcaaaaggtgatcaatcttgggaggggtctactaggttgggttgatctttggcatggaattttaattttcaatgcacgtgatgaacaacctcagattcagtatgtcccgttgcctgagcccatgccactcaacaaggaaagttttcgcccatccaatcgctcggaaagctgccctatgttgtttcgggatgtcatttgtagcagcagcggtgagatcaagtttgttgagttggaacaacgacagaggaaaatacaacctattcctcaagagctagaagatgtccgtcaagaatctaaagaagatgtttgtgacagggatgttttagatgattcatacctgatgtcatgtgcacacatggacgatttgcccaaagaggagacaccatcctttgttggtgatggttggagggcagtgacttggagtagattaatttcgtcaaattgctggcagaaaggttacgtgattgacagtgatgacatgcaatcaacatatgaggtgttgacatctacacaaagagacaaaggtgttgagatgttaagattcagggatctcttctcagtttttcccaccctgagcctgaatggtgctggtgatcttctttacctcaagagcactgtgaaatttaaagatttaaatggttgggtgtcttccattgacattggaaaaaagacaataaaagttctcaaaccgtattgtaatggaaggcatatcccatttgtgcagatgttccggtcttgtgtattatgccaccatctgacagtgctacctggtcctgaaaacataggtcggttcatcgaaacaagcagtaatgagaatcatccaaaaactatagcagctagcattatgcctgagtctaactgtttggctggaaacaaaaggtcaagatcagccacgagatggtctcctgcacttcgtggctggccttctgcgagagttgccaaaccagctctgagttggaggtcatgcccaccatcactttctccagtttcgtcgacttatggccttagaaacacagctggttaccatatggcacaaacatgttgctttgaaaatgatccccgtgcaactgcgaacacaaccccgaggcatcctgagaatcaattcactcagcatggatatgagcagcgggaaaatgatttcattttgtctgcacccaactttgttcgctggcataggccgccattctctgctggtggaactctgcctccacctcccccaacgcagcagccctcagcttttggtactctgcctccgccacgcccatcgcagcagttttctgcatgtggtaccatgcttccgccatcctcatcgcagccattctgtccttcggttcgatcgctcgcaatgcagacgttcgctactcctggtccaattctgcctggacctcctgttactccaatgcagtggcctgtttttatttctcctccacagcagcagctttctgcctgtgctgtatggccgcaggcaggtaccctgcagcaggaactgccaccccatatcccgttcagagctcatcagtgcccgtga</cdnaseq>

Protein Sequence

<aaseq>MSRRIMNRESFNPPSLPNLAASRCWPESVILANRAYIADCKNPT TATAQSRDGHTVQISFCFAEAPVISYFCAHCYNPRVKVEFFTEPIIVAGEGAFVVLRV HLSSPLLSEFFIYRAGPGLPSLERVQDPTGYNSPIFYLSLLGIASCDNDDGGSCLLVG FRNRLTHYEVYVYTSTTKTWSTRKLDLSPGIRAIRPQKVINLGRGLLGWVDLWHGILI FNARDEQPQIQYVPLPEPMPLNKESFRPSNRSESCPMLFRDVICSSSGEIKFVELEQR QRKIQPIPQELEDVRQESKEDVCDRDVLDDSYLMSCAHMDDLPKEETPSFVGDGWRAV TWSRLISSNCWQKGYVIDSDDMQSTYEVLTSTQRDKGVEMLRFRDLFSVFPTLSLNGA GDLLYLKSTVKFKDLNGWVSSIDIGKKTIKVLKPYCNGRHIPFVQMFRSCVLCHHLTV LPGPENIGRFIETSSNENHPKTIAASIMPESNCLAGNKRSRSATRWSPALRGWPSARV AKPALSWRSCPPSLSPVSSTYGLRNTAGYHMAQTCCFENDPRATANTTPRHPENQFTQ HGYEQRENDFILSAPNFVRWHRPPFSAGGTLPPPPPTQQPSAFGTLPPPRPSQQFSAC GTMLPPSSSQPFCPSVRSLAMQTFATPGPILPGPPVTPMQWPVFISPPQQQLSACAVW PQAGTLQQELPPHIPFRAHQCP</aaseq>

Gene Sequence

<dnaseqindica>3932..3940#2910..3342#2687..2771#2407..2569#2268..2335#227..1583#tcaagacggcaggcgccccgaccaccagccaccagccaccggcatcggcacccccgatcgcgaccaccccgccgccgaacgccgccgctgccgccgccgcctctctccgccaccgccccagctcgccgccccaccgtcgagcgccaccaacccgccgccaccgtgcgccacttccacgagaggaaaaaggaaaccctaatttccaaatccaccgcttcttccgacaatgtcccgaagaatcatgaatcgcgaatccttcaatcccccctccctacccaatctcgccgcctcccgctgctggccggagtcggtaattctggctaaccgggcgtacatcgccgactgcaagaaccctacaaccgcaacagcgcagtcaagagatggtcacaccgtgcaaatctctttctgcttcgccgaggcgcctgtgatctcatatttctgtgcgcactgctacaatcccagggttaaggttgagttcttcaccgagcccatcatagtggccggggaaggtgcttttgtcgtcctccgcgttcacttatcctcgccgttgctctctgaattcttcatctacagggcgggtccagggttgccatcactagagcgggttcaagatcccacaggttataattctcctatcttttacctttctttgctaggcatagcatcttgtgacaatgatgatgggggaagctgtttacttgttggttttcgcaaccgtttgacccactatgaagtttacgtctacacttccaccaccaagacttggagcacgagaaagttggatctgtctcctggaattagggctattcgacctcaaaaggtgatcaatcttgggaggggtctactaggttgggttgatctttggcatggaattttaattttcaatgcacgtgatgaacaacctcagattcagtatgtcccgttgcctgagcccatgccactcaacaaggaaagttttcgcccatccaatcgctcggaaagctgccctatgttgtttcgggatgtcatttgtagcagcagcggtgagatcaagtttgttgagttggaacaacgacagaggaaaatacaacctattcctcaagagctagaagatgtccgtcaagaatctaaagaagatgtttgtgacagggatgttttagatgattcatacctgatgtcatgtgcacacatggacgatttgcccaaagaggagacaccatcctttgttggtgatggttggagggcagtgacttggagtagattaatttcgtcaaattgctggcagaaaggttacgtgattgacagtgatgacatgcaatcaacatatgaggtgttgacatctacacaaagagacaaaggtgttgagatgttaagattcagggatctcttctcagtttttcccaccctgagcctgaatggtgctggtgatcttctttacctcaagagcactgtgaaatttaaagatttaaatggttgggtgtcttccattgacattggaaaaaagacaataaaagttctcaaaccgtattgtaatggaaggcatatcccatttgtgcagatgttccggtcttgtgtattatgccaccatctgacagtgctacctggtaagtgttgtgcacacctaaatattctctgaactcataagtcagacaatttagatgcatctataattcccactagacaaaagcctactgccaaatggatacctccattgggtcagttgctgaaactaaacatagatggttctttttatgctgaaacaaacaggggtggctggggtgtaattgtgagagattgctaaggtcaacctttcgtggcagcagctggtagtctaatgaatttacaagatgcactacatgcagaagtaatggcttgttttgaagctctcaatttggttatctgttttggtataaatcatgtcattgtagaaactgattctgaacaactagtacaagctcttaaggatgatgaattagataatggtatgaatgctgctgtgattcgtgaagttaggaacttattctctctgcagtttgatgtgacaaaggttgtgtattgtcatagagcttgtaatagtttgatgtgataatgtgccttgggttcctctacacctgtagtttggttaggggaatttcctgagtttgtttgtaacttggtgaacaacgatttagctgtttcatttaagtaatgaagttctcttttcctctaaaaaaaagtgttgagcacacctgatctttgccgatttcctatgattatgattatgcttattagtataatggcttttgcaggtcctgaaaacataggtcggttcatcgaaacaagcagtaatgagaatcatccaaaaactatagcagctgtaagtaacttaatgccacttctattttaaaaaattccgatcacttaattctcccttccttatttgcacagagcattatgcctgagtctaactgtttggctggaaacaaaaggtcaagatcagccacgagatggtctcctgcacttcgtggctggccttctgcgagagttgccaaaccagctctgagttggaggtcatgcccaccatcactttctccagtttcgtcgacttatggtgcttattctgacacttgatcatttctgctaaatgtttaaactttactagtttcctactgaattctttatagtgaggcaatgtgagcataatcatgtataataattgcttttgtaggccttagaaacacagctggttaccatatggcacaaacatgttgctttgaaaatgatccccgtgcaactgcgaacacaaccccgaggtaagttttatctatgtgttatgagagcattgtgctgtttagttttctgcactaatgatattaattttgtttaatttgctgtatatttccaagctctttgctgactattttttctttcttggatttgatgtacttcaggcatcctgagaatcaattcactcagcatggatatgagcagcgggaaaatgatttcattttgtctgcacccaactttgttcgctggcataggccgccattctctgctggtggaactctgcctccacctcccccaacgcagcagccctcagcttttggtactctgcctccgccacgcccatcgcagcagttttctgcatgtggtaccatgcttccgccatcctcatcgcagccattctgtccttcggttcgatcgctcgcaatgcagacgttcgctactcctggtccaattctgcctggacctcctgttactccaatgcagtggcctgtttttatttctcctccacagcagcagctttctgcctgtgctgtatggccgcaggcaggtaccctgcagcaggaactgccaccccatatcccgttcagagctcatcaggtactagaacaatggatcacaaaaacaaaactttcagcaactataacaaaaccacactatttgctgcaaaagcatttcacaaaaccacccaatggatgtacaagcttgaaagaccgtgaacactttgaagcgtctgttttttaagttaatcgattaaaaaagtgttaattttaccaaaggtagcgtgtttttaatatctactcatattaattatatgcattaaaatcatgtaaaaaatgatgaatttcataggaggcaaactagccagctcacaattcttttttcccctaaatttgtaaactttctttttgtcgtttcttaatgaatctcaacattatttaaagggaggcagtgaggaattttaaccaagttttatttttatggcttccatgtcaaattttgctgaattttgttcaaagtttcaagttcaatagagttttgaaatgttgatgatttggtcactttgccgcctccaaatttgtttcataactaaatttggagaaggaaagaatgccatcagatccttatatccagttcatttgtggaatatttgtgttgctataagtatgctaattactcgattttacagtgcccgtgatgatcctattcttaatgaagctggttgaatagacgggcatcttctcattgcaggagaaaatcttctcgtggaccttagttactttatttgttaaatccagaattcagtccgtcttgtgataactattgatatacgaacctttctacgtggaccattgctgatgtgttcttgcttatcatgagttctgtgatgttgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0173700, RefSeq:Os03g0173700