Os03g0178500

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0178500| Description = Alpha/beta hydrolase family protein| Version = NM_001055688.1 GI:115451104 GeneID:4331818| Length = 5756 bp| Defini...")
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Gene Name

Os03g0178500

Description

Alpha/beta hydrolase family protein

Version

NM_001055688.1 GI:115451104 GeneID:4331818

Length

5756 bp

Definition

Oryza sativa Japonica Group Os03g0178500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4115296..4121051

Sequence Coding Region

4115617..4115731,4115856..4115923,4116724..4116819,4120305..4121018

Expression

GEO Profiles:Os03g0178500

Genome Context

<gbrowseImage1> name=NC_008396:4115296..4121051 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4115296..4121051 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcagcggcatgccaccgccaccgcctcggcgctcttcgcgctgctcccgctgtcgctgctgctcttccggctgctcgtcctcctcgtgcggctccgcctcgccgccttccgcgacgccgcgctgtccctccacttcctcgcccgcctccgcatccgccccgtccacctccgcctcccgggcaccgacgccaccacggtccgcgtctggtgccccgcggcgccgtccgccaagccgccgctgctcctcctccacggcttcggcggtgactccaagtggacgtgggcgcgcaacctcccggcgctgtcgcgccacttccacgtctacgcgcccgacctcctcttcttcggcgcgcactcccgatccgcctcgccgctccgcaccgtcgcgttccaggcccggtgcgccgccgaggccatgcggctcctcggcgtcgaccgctacgacgtggtcgggatcagctacggcgggttcgtggcgtaccggctggccgccgtggagggcagggaccgggtgccgagggtggtggtgatgaccagcggcgtggcggcgacgccgggggagatgagggagatggcggcgcgggaggagagggccgtcgaggagtcgctgctcccggagaccgccgacgggctgcgccgcctcgtccgccggtccatgcaccgcccgccgccatggatgcccgacttcgtgctcgacgatttcatcaagttgatgtgcgtggttcagaggaaggagagggccgagctgctacacgagcttctcaagaacggagctggcatcgatcccctccccgttctcactcagaaaacgttgattctgtggggtgacaaggaccaggtgttcccgttggatctcggccacagactgcaaaggcatctgggagacgtgtcacggctagagatcatcaaggacgcagggcacgcgttgcagttggagggagccgaccaagtgaaccgcttcatcaagtctttcctcctggactcgtga</cdnaseq>

Protein Sequence

<aaseq>MKQRHATATASALFALLPLSLLLFRLLVLLVRLRLAAFRDAALS LHFLARLRIRPVHLRLPGTDATTVRVWCPAAPSAKPPLLLLHGFGGDSKWTWARNLPA LSRHFHVYAPDLLFFGAHSRSASPLRTVAFQARCAAEAMRLLGVDRYDVVGISYGGFV AYRLAAVEGRDRVPRVVVMTSGVAATPGEMREMAAREERAVEESLLPETADGLRRLVR RSMHRPPPWMPDFVLDDFIKLMCVVQRKERAELLHELLKNGAGIDPLPVLTQKTLILW GDKDQVFPLDLGHRLQRHLGDVSRLEIIKDAGHALQLEGADQVNRFIKSFLLDS</aaseq>

Gene Sequence

<dnaseqindica>5321..5435#5129..5196#4233..4328#34..747#gtgtgcacgcacagtgcaccgcgtgtccgcgccatgaagcagcggcatgccaccgccaccgcctcggcgctcttcgcgctgctcccgctgtcgctgctgctcttccggctgctcgtcctcctcgtgcggctccgcctcgccgccttccgcgacgccgcgctgtccctccacttcctcgcccgcctccgcatccgccccgtccacctccgcctcccgggcaccgacgccaccacggtccgcgtctggtgccccgcggcgccgtccgccaagccgccgctgctcctcctccacggcttcggcggtgactccaagtggacgtgggcgcgcaacctcccggcgctgtcgcgccacttccacgtctacgcgcccgacctcctcttcttcggcgcgcactcccgatccgcctcgccgctccgcaccgtcgcgttccaggcccggtgcgccgccgaggccatgcggctcctcggcgtcgaccgctacgacgtggtcgggatcagctacggcgggttcgtggcgtaccggctggccgccgtggagggcagggaccgggtgccgagggtggtggtgatgaccagcggcgtggcggcgacgccgggggagatgagggagatggcggcgcgggaggagagggccgtcgaggagtcgctgctcccggagaccgccgacgggctgcgccgcctcgtccgccggtccatgcaccgcccgccgccatggatgcccgacttcgtgctcgacgatttcatcaaggtcagtgccttgcctctgtccgatcgatggcccgtgtcgtcttgtgtgtttgcttggttttttaggcgcagttttgtttgctactcccatggatcgagcagatgctgtgctatgcgcgctagctcagcatgcacgtgctttgcttcagctcagcacattccagcacctactaccacactcgctaatccatccaataatgactagcctgtgcaaggcaagagtacatcttgccgttttcaaataattaactggcacgattaactttcactactaaagccttgtcttaattacaggccccgttcttttctttttattaatatgtgtatttaccaaggttttcattagcacgttttttagctagaaattagcgtcagataattagcacgtttttttaaactagcaaacgctattttcttaaaataacttttcatatagaagctgcctttaaatattagcaaatagaagttatttttatgtttgtaataattaaaacttacatgtgcttcattttgcatgcactaattttatcttatattttagtctatctcaaacatcaagataagaaaatgaataaaaatcatgtgggacaaatttaacttcgtgatgttgtatatagtatcgtcatcgggttttaaatatataagttaacttttagaaatggtgtccgatcatttatcttatttaataaaattatacaagtattatttactccctccgtctcataaaaaactaatctagtaccatatataacataattgttattgtaagactgtcactagaaaattacaaaaatatcactaaaactatcattcgggtggtattcttgcaaaattgaaaaaaccggtggcaaatttgcagatgcccctactatgaatgggacatacatttgtttagattcgtagtactagaatatgtcacatccgattctagattcgtttttatgggacagagggagtatgttgcattgatatgaagatacttaaaatctgacttgtatttttatatttgtactaaatccattttaataatccgaaacaggcaaacatcttgtttttaaaaatcaccagtgacgtatatttaaaattggggagcaatttaattgttcctgcaagattcacatgcaacatttccacttactgatagaatggaacaagcctcttaaggaaaacctcgttaattggtacaaaaacagtacggggaacttgcactctttgtacggtggcgtatatgcatgtgttgtgcacgtgccggattgtgatgcagaaccccctaagtttctttctcacgaaaaacatgtacattgatcggtttttgagcaatcttgccggtcgagcgaggttagtagagtttatatacgaaactccagcttagactggagtgttcgtttagatcgtactgtatatacatatgcgtttgacttttaagtataagcctaattgagatctccacgagtttgaatataaagttaggccaaacatggtagcaggaattaagcgagaacaattgataacagtgccatataaattgcatggtcaggtggacacatccaaattaagccagagtagaacacgctatcctttgcatgtgagcaattccagaatcagatcgtacagcaccatacggcaccaccagagattaatttggatttgcatttagtagcaaatttgaaaaatactagagtaaaatatagatcggcaattcagtactcctacacgtgtagtgctggaggagagtggcacgggcacgtaaaggtaaagtgctccggtagatctggactgacgtggcggtgatgccgtacgttacgtcaaatctcgtggattctgtcatgggcgctgggcccttacgtggcccacgtgtcgtcttcaggaatactactcgaaaagggaccacctatacatttgtcgacaaattttctactaaaaatttgacagatgtaattatagtataatcgtagtgtaattacaatataacttgtatgtaattacactgtaacttgcatgtaactacagtgtaacttgtatgtaagtttcacgtaattttgaatcgttagatctattacaagatttgttctatggaggaagaaaaaaatcacatcacacacatatatgaaagaatttgttcccacgacctctattttactgaaataacatgttaccgagagattcttgaaagttacatacaagttacattatagttacagtgtaattacatgcaagttacagtgtaattacactacgattgtactgtaattacatctgacaaatattagggggagaaatttgatgacaaatatctagcaaaatcgactcgaaaattaggcgagggccagccccaaaataatgttgctgctccactagctgccacttactcgtattttgtttttttttgttttttttttggtggatgtaacaccgatcaagcactccaattaaagtatggcctcgaactttggcgtgtgattcgagctggtctaggacggtgaaagcgtaaccttttcttattgcaagcttgcaacacgacagcaccaatctgcactacacgaacttgtagcacaagatctcacatttctcgtaactttctttgatttttcaatggagggaaaaagctttgcctcattttaactttgcaaaacagaacaaacaaaaccccatgtatggacaccattgacgtggatccgaccaagtcaaagggtataagatgaagacgccatgccgtgcgccgccgtgcgtaataacgtcgggggtgggggaagcgaagaacgaccagctctcgaccgcgcgcgtacgccagctggtgcacgcactgaatgtatacaacggcaaagtacagtagcacatagtaactccaagagcagagcatatgcaggggacatatcagcaactagcacggacgatagaatgtccctcggtatggagggatacgatcttcgcgatgaactcgatcctacatgggatacgccgcttggatcgagcaatgaattgcatgtgcacccacctctatcagccgtgtgcccctttccgagttggtcgccaatcagcagatcaatgcgtactctactcctttttgttgtttgggagatttggaaggagagaaatcagcgtatcttcaaatataaagagtggttcctaggctgttggctaaaatgaaggaagaagcacgaacttgggttctcgctgaagcaaaaaaaaatagcgagtttctttctccacacgtatagtctgtatagttttttttttctttctttctttagaggttgtatttttctaccgctatatttaataaaatagtacaatctcgtactgattgcattaaaaaaagtataggggactcacgtgtgcttccctcccttaacgatgagcatttgatcaggagttcaggacatatgcagttcgaactggactcgattctaaacggggagatatatggcatttcagtatgtcagaatgtaattttgtactgactctgttttttttttttttgcacagttgatgtgcgtggttcagaggaaggagagggccgagctgctacacgagcttctcaagaacggagctggcatcgatcccctccccgttctcactcaggtatgccacatccacatttccagtgtatgggctgtgtatacatacatacgccaatatggttatagaggccggataatttttttttcaaaaaatagcatacatatatcatgtttttaaaaacgagatttagagaaagaaacgtcccaccacattgaaaattgaacacaggattttagggttaaaatcacacccatcttatcactgtactttaagtgcatctcatatgccatgctttcacagcactcaacaaaagaaaataaatactctaatgcaaatgatctgattgccgggccaaaaaaaaaaaggtgatctgatcgatcgatatcccatgatcgtttgtctagtcatcaatctcaaacggagtccacacagaaagcgtcatcatcccgtactgttgctgtaatgctgttcattacttcattctgtcatatgcgtgtctacactgtactttctctctcttcttctgtactgttgcccgatcgatatcttcccttggaccctttatttaattttattgtttgtaagcaactaagggagctttcggcaggaggagattgtgagtgagtttgtctcgtttcccgcgctcacgtttcccgaactactaaacggtgtgttttttgcaaaaagtttctatacgaaagttgctttaaaaaatcatattaatccatttttaaaatttaaaataattaatactcaactaatcatgctctaatagctcacctcgttttgcgtatcttctcaatcttctcaatctcctcccactcaaactcagcctaaataagttttggtgtgcaccacagaaaacgttgattctgtggggtgacaaggaccaggtgttcccgttggatctcggccacagactgcaaaggtaaaattggacatcaagtacctaatttcaccacttcggtataccgcattaatgcagaattgatggacgcttgattgcaaaaaaaagcagtgatcactgtgccttcgcatggctgtggctgcaggcatctgggagacgtgtcacggctagagatcatcaaggacgcagggcacgcgttgcagttggagggagccgaccaagtgaaccgcttcatcaagtctttcctcctggactcgtgaaatgggccggaagttgggagtggcccagtactagagccctgctaagaagtactagaagcaggagctctcggaaaggcccaaaccaatccaactgtaacccggatttgccctctatcctcagatgccgatagtgtaatgaccctatttgggatgtaaaaaatatataccgtgaactattgattaattgtcaaatatgaaatctcccaataaaaaaatgtgatgctcacggactctgttttttcctcttgactatggaactgcaggcagatggcagtaccactaaagtggctaatttattgttgtgatcattctgagatcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0178500, RefSeq:Os03g0178500