Os03g0180700

From RiceWiki
Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0180700| Description = Glycosyl transferase, group 1 domain containing protein| Version = NM_001055700.1 GI:115451128 GeneID:4331831| Lengt...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0180700

Description

Glycosyl transferase, group 1 domain containing protein

Version

NM_001055700.1 GI:115451128 GeneID:4331831

Length

4994 bp

Definition

Oryza sativa Japonica Group Os03g0180700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4201766..4206759

Sequence Coding Region

4202314..4202325,4202488..4202616,4202732..4202807,4202909..4202961,4203043..4203104
,4203173..4203283,4203362..4203528,4203638..4203743,4203831..4203894
,4203963..4204029,4204147..4204236,4204322..4204470,4204916..4205050
,4205124..4205179,4205339..4205372,4205958..4206068

Expression

GEO Profiles:Os03g0180700

Genome Context

<gbrowseImage1> name=NC_008396:4201766..4206759 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4201766..4206759 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtggcactagaggcagggaggaggaagcgagcggcggtggtagttctgggagacattgggcgcagcccgcgcatgcagtaccactccctctccctcgccaaccaggctggtatggaagtggacattgttgcaaatggaggaagtgacccgcatctattattgagagaaaatccatcaattcacatccatgaaatgaaatcagtgcagttaacaggaatattaaagatatccggtgccctgacactgctacttaaagctgccatccagtttatcatattgatttggtacctttgtttcaagattcctcgccctgatgtcttcattgttcagaatccaccctctgttccaacattggctgctgtaaaactggctagctggctaagaggtgctaagtttattgtggactggcataactttggatatacactgcttgggttgtctcatggcagaagccatatcattgttaaaatctacttctggttcgagaagcattttggacggatggctgatggtgccttctgtgttacaaaagcaatgaaacacgagcttgatcaaaaatggggaatcaacgcaacagttctttacgatcaatctcctgaatttttccatcctgcttcattgacagagaaacatgagttgtttagcaggttggggaattccatttgtagtgctatgggcaatgacgattgcatttctgttgagaaagaagtggaagacaggaacactactgtatttacaagctgggtcgatggtgaaattttcttgaagcctaatagaccagctcttgttgtcagcagcacaagctggacaccagatgaagatttcagcatacttctggaagcagcacttatgtacgatagacgtgttgctgcaactttaggagaagatgattcaatggacgagggaaagctttggattgatatcaagaacgggaagcaatttgtctacccaagactgctattcattatcactggcaaaggacctgataggatgaagtatgaggagcaaataaagaggttgaaactgaggcgtgttgccttccggactatgtggcttgcatcagaggactaccctcttttgcttggatcggctgatctaggtgtatcattgcatacttcctcttcagggctagacctacctatgaaggtggttgatatgttcggttgtggattaccagtttgtgctgcttcattctcctgcattgatgagcttgtaaaaataaataataatggacttcttttttcaacatcttctgagcttgccgatgaacttatgatgctctttaaggggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgccttgaatactgggtcatcttccaaatggtcgacagaatgggaacgttatgcactccccttggtgaaccaggtcataggttga</cdnaseq>

Protein Sequence

<aaseq>MAVALEAGRRKRAAVVVLGDIGRSPRMQYHSLSLANQAGMEVDI VANGGSDPHLLLRENPSIHIHEMKSVQLTGILKISGALTLLLKAAIQFIILIWYLCFK IPRPDVFIVQNPPSVPTLAAVKLASWLRGAKFIVDWHNFGYTLLGLSHGRSHIIVKIY FWFEKHFGRMADGAFCVTKAMKHELDQKWGINATVLYDQSPEFFHPASLTEKHELFSR LGNSICSAMGNDDCISVEKEVEDRNTTVFTSWVDGEIFLKPNRPALVVSSTSWTPDED FSILLEAALMYDRRVAATLGEDDSMDEGKLWIDIKNGKQFVYPRLLFIITGKGPDRMK YEEQIKRLKLRRVAFRTMWLASEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG LPVCAASFSCIDELVKINNNGLLFSTSSELADELMMLFKGFPEECDDLKSLKVGALNT GSSSKWSTEWERYALPLVNQVIG</aaseq>

Gene Sequence

<dnaseqindica>4435..4446#4144..4272#3953..4028#3799..3851#3656..3717#3477..3587#3232..3398#3017..3122#2866..2929#2731..2797#2524..2613#2290..2438#1710..1844#1581..1636#1388..1421#692..802#ggaggaatcgtcccgtcgtccggcgtccccccctgtatccccctcccctcgcacggcgatcggatccagcgcacgggtggggaagcaggcggcgccgctctcccccacgcacccgaagtgcggcggcggagcaggtatgcccacccaccccaaccctagaaactcgcccctcttccgctcgattttgcccattccagatcaatgtcagaacaacctgacttgactttaggacaatgaaattcatgtatgttcctaagcgattgctgatgattaggactagtcccctttgctacttgtagaactgtggaatacacagtaccgatactatccgagtgttggttgccaatcattcgtacaaactaatgaatctccagttgcgttcaacaatatgcgaaacaacgaattaatttacatgagtataaactcactagcatatattgcatccctacattcttgttccgtcaacagaacattgttgtattgatgtaaaatagtacagacgtattctctaattgagcataaatgcggtgaacagaaaaataaccaagagaaccgttgtccattttttatctactcctcccttcctggatgtttggagctaatacctagctaaattaaatgccttttcaggaacctcacttcttggtggcggttgaatctgaaatttccaaactcggaaggctagtaggcaatggccgtggcactagaggcagggaggaggaagcgagcggcggtggtagttctgggagacattgggcgcagcccgcgcatgcagtaccactccctctccctcgccaaccaggtattgatccccttcccaaacccatcatctcatattagttctgttttgttttgattgggaaagcttagtccctccagctagctgtaggtgtatttcgatgtgctgtgatagttaatattccttcatgaattttgcacttaattcatcacttctctagtgtagcatatggtcctcggttagatagcagggtaataactagtaaagaaaggagatgtggtgtgtgtcagttgtgcgattgcacagatgaagtaactaatgcagtggtggtcatttgcaccccctgaaagcgtgagcggacatagcttcgggttgattaatgcccttgatttttggttctcccttaaaaatgtgtcttttttttctccctgaaagtgtgattacacgtgcaaatattagtcctgttagataagacaggttttgaaatgaagagaagaaaattgccttgcatttactaagcatatatattttcttcaagtggcaaaaaaattgtgatattgggacatgctatgtgttgggaagaaccaactctatgtgcatatgtctctatgttttagttaattagtcattctttatttttcttgacaggctggtatggaagtggacattgttgcaaatggaggtattattctttttgcagtttcattgtacttttggattttattcatttataccttccacttagtgcacatcatacaggctgagtttccaacaactttcgaccttctgttgcgtcttttgttgaaatttgacctatgttctgctttgggtaaatgagcaggaagtgacccgcatctattattgagagaaaatccatcaattcacatccatgaaatggtactgattgtttgaaagcattacgctgttctctaattttgtgtactattaacttttgaattgtaccttctagaaatcagtgcagttaacaggaatattaaagatatccggtgccctgacactgctacttaaagctgccatccagtttatcatattgatttggtacctttgtttcaagattcctcgccctgatgtcttcattgttcaggtcagttttcacaaaattgcattgagcttctttagtcgcatgcatggttcagaattacatggacaatttatagttttctgcaattactatcagtcaatagtgtggaattcttctatagttcatcatctatcaatcacgctagtaaatccatggtcttaccaaagtattgcacagcttaattagcaagtcatgctgtagacttatacttatgcagtacctattcattacaccattttcaattcaaaatttcagctatgataagtgcagcctttacttaggcgaagttttgtcattttgtatagtatcttttggccttactaactgacatagacttttattacctagaaatccttctatttgatacttacaatttatttgttaattcgaaaatctcacacactagcatggaactgattcttttattcgatcatcttctgtccaacagaatccaccctctgttccaacattggctgctgtaaaactggctagctggctaagaggtgctaagtttattgtggactggcataactttggatatacactgcttgggttgtctcatggcagaagccatatcattgttaaaatctacttctggtaattcctgtcctgtttgtttatctgctagatgtagcatactgattgtgtgtgttaatatagtggtgtgttctttgcattctaggttcgagaagcattttggacggatggctgatggtgccttctgtgttacaaaagcaatgaaacacgagcttgatcaaaaatggggaatcaagtaagatcaaactttcaggcacttttcatgtttaaggctgttgtgttagcacacaactacttttatttttgaagtcgctagctacagtttatattaacttaactggttggatttcagcgcaacagttctttacgatcaatctcctgaatttttccatcctgcttcattgacagagaaacatgaggtgagcatctgttttcatttatttcctcatctttgctgtactgcctatctgaccattagatgaaatagttgtttagcaggttggggaattccatttgtagtgctatgggcaatgacgattgcatttctgttggtatgttctccagccactctaaatatttgattgctgtaagaaaatttcactttgatatagtttctactgtttgctcttacaacacagagaaagaagtggaagacaggaacactactgtatttacaagctgggtcgatggtgaaattttcttgaagcctaatagaccagctcttgttgtcagcagcacaagctggtctgttctcttgatctgggtgatcctagttgtatcattatttatactcagcacatgtggttaaaatgaaagtaaaattaagaatcttttcctttgccacatatttcaggacaccagatgaagatttcagcatacttctggaagcagcacttatgtacgatagacgtgttgctgcaactttaggagaagatgattcaatggacgagggaaagctttggattgatatcaagaacgggaagcaatttgtctacccaagactgctattcattatcactggtttgtgcattctgctaattagctccagtaaccagtttttgagtattgttatgatatccatgaatatcaattttgaaggcaaaggacctgataggatgaagtatgaggagcaaataaagaggttgaaactgaggcgtgttgccttccggactatgtggcttgcatcagaggactaccctcttttgcttggtaaactagttgattgccaaaagaattccatgttgtagcataaatgctgattctttgaataattacaggatcggctgatctaggtgtatcattgcatacttcctcttcagggctagacctacctatgaaggtataactcataagcatccgctctgttgaaaaaataggcattttttatctgttgcgtgtaacttgacgattttgcttttaggtggttgatatgttcggttgtggattaccagtttgtgctgcttcattctcctggtaatccatgtttcccgtatgtttgatttgttacatttgggctttgaccttcatgtcgtttgaattaaaagtatgtcctaatttttttttcgtatgtgcagcattgatgagcttgtaaaaataaataataatggacttcttttttcaacatcttctgagcttgccgatgaacttatggtgatgatcacttttaattatttatttccatattttatgttcatatcttttttttaaatacttgttgaaagtgctgtgtctagattttaattgttgcaatcgcaaatccatgcagatgctctttaaggggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgccttgaatactgggtcatcttccaaatggtcgacagaatgggaacgttatgcactccccttggtgaaccaggtcggatcttgaacctaaatgactaaatatggtcattacagtcacctgagtatgccttaccaatttctttcgtaaggaaatttgcagttgcaggtcataggttgaaatgcatgacagcattccatagattataagccttaccttccctttctcaaattgcaggtcataggttgaaatgcatgataacattcgacaggtaggcaaatcatgtatttgttacagcttgcttgaacatctgttcattccagagattataggcgcactgtgcacttgagtgagcatatggcatatgtacatttgaaggttggggagagaccatatcatatttttgtttgcttacaccaaggcaggatgtatgacaactagaactgaccctttagtttgatataggacctgactcgaatctcctttgatattttatttggtaagcaaaagggaaacccttttttgtaatagaagttgacaacacgttttgtaaacagacatgtacatgtactgaagtacggtcgtacaaaaaagaaacgctagtctcctctctcaagaaaagaaaaaaaaatccaggaaattgttcttgttgcctctttactgccaccgggggtgtctatatctccagatccaacacaatgtctggggaatgaattcaaggatgtaaaacatcagattctatatatgttagcctgcaagaaccgctacaatatactattctcattttctgtcagacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0180700, RefSeq:Os03g0180700