Os03g0196800

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0196800| Description = Similar to Cyanelle 30S ribosomal protein S10| Version = NM_001055801.1 GI:115451330 GeneID:4331942| Length = 3463 b...")
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Gene Name

Os03g0196800

Description

Similar to Cyanelle 30S ribosomal protein S10

Version

NM_001055801.1 GI:115451330 GeneID:4331942

Length

3463 bp

Definition

Oryza sativa Japonica Group Os03g0196800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5105584..5109046

Sequence Coding Region

5105738..5106049,5108510..5108566,5108790..5108978

Expression

GEO Profiles:Os03g0196800

Genome Context

<gbrowseImage1> name=NC_008396:5105584..5109046 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5105584..5109046 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtctccacctccgcctcctccaccctcccgctcctctccctccatcgcgccgcggggaaccccaacccggccgcactctccttcccgcctcccctccgcgcgcccccgctccgctcccgcgccgccgctgccgcggcctccgccgcagcaccgcccgccgagaccatccccgacatgcccgaggagacggaggggacggggattccgatgccgtcgtcgattggggatgatggggagcagttggcacccaagcagaagatcagaattaagctgaggtcttactgggtaccattgatcgaggactcctgtaagaagatcattgaagctgcaaaaacaacaaatgcaaagacgatgggtccagttcctctgccaaccaagcgaagagtatattgtgtgctcaattctcctcacgtgcacaaagattcaaggttccattttgagatcagaacgcaccagcgattgattgatatcatgtacccgactgcacaaacaatagattccttgatgcagctccagctccctgccggggtagatgttgaggttaagctatga</cdnaseq>

Protein Sequence

<aaseq>MAVSTSASSTLPLLSLHRAAGNPNPAALSFPPPLRAPPLRSRAA AAAASAAAPPAETIPDMPEETEGTGIPMPSSIGDDGEQLAPKQKIRIKLRSYWVPLIE DSCKKIIEAAKTTNAKTMGPVPLPTKRRVYCVLNSPHVHKDSRFHFEIRTHQRLIDIM YPTAQTIDSLMQLQLPAGVDVEVKL</aaseq>

Gene Sequence

<dnaseqindica>2998..3309#481..537#69..257#agaagcctcccgcacttgctgctctccccttccactctcatccccttcccctcccaccacccttcgccatggccgtctccacctccgcctcctccaccctcccgctcctctccctccatcgcgccgcggggaaccccaacccggccgcactctccttcccgcctcccctccgcgcgcccccgctccgctcccgcgccgccgctgccgcggcctccgccgcagcaccgcccgccgagaccatccccgacatgcccgaggtacgtgggctacccagccccgctacctatgcttagcatctcttttttccatcatttcagactgtttgtgttcctactggaggaggagactgtcagttagttttatatgtgtaggccaaattagtaccccattcgtgaggtgtaattgtgtaagcctgtaataaggaattagtgcagtgtagtgcacatctgttcgctaactgtgctgtgcttatgctttcaggagacggaggggacggggattccgatgccgtcgtcgattggggatgatggggagcaggtaccttatcctagagctaacgttgttaaaacgtctaatgctttattttagtaatgtcattgatgcgagcacttcgagaatttttcgtccttaccatctagattctattccttagttctaattgaatgacgtgcaatccttaattctgttccatagcgattactgagtacgttgtatgtcaatgtggttctcagtaagtgagttgtggcattatgtgaagtaaagtttttcagtcttaatggctttactgttggcacaaacgggttactttgtctttgtgatttggatttggatactagaactccttccatggatgccaccgtagattgtataatgcctttaaccctaatgtttatgagttaatgtgttattatgcatgaggtgacatgaaacagggtgccatatatccttgatttttttaacggaagtggggataataaccaagtcacacacatcaaatgctgtttgtttggaggtcgatggtggtcatgatttccatgctcagcttaatgctagagttcttcctggatgaaatggtctaaccacttgtatttccctgtattactccaatgtttcctgatcattcatgttttgttcctccttggaattggtatacatcaccaaaggcacttttggtgttagtagaaaaaagatgagcccatttgtctatgctaatttaaagatgatatgaaattgccttatcatctctctccgttctgtcgatagctttatcctctcactcttgcgagtttctccatatcaattatccattgaattctatataaccattctcaaccatttttctgttgctctgattatcttctattttgtatgttatacattttgttattccatgtttagtgcatacatgtattgttggtagtgttctactccaatatgcaagaggcaccatttcttctattagcttctgttgcatgttggttcgaaggaatgaatctgactttttggttgtctagtgaaagatagtcgtcactaaagctggcaaatccttttatgtaaaaccgtgcctgctgcatgtttgatgccgtccttggaaccacccctagccctaggtgtgtcctagactcctagctgctggagattttttggcctgttttttccttttttaccttagactattagcatgtgttagtggctactggttactccctatcatctctgtttcttgcttcacgtcttccatgtgttaagcatgtccatcgtgcatatgtatgcagttactttttggtgctactgctggaaaagaaattgttacaaggccttgttcacaattgcactcctcgttaagtgattcctccaatgtatcacaagagaaaatagtgataacaaacagatatggagagaaaatcgttggtcttttgcatgaagctggatctaacgatattgtagttttgtgccatggatttaggtcatcaaaggaaagtagaaccatactatgtctcagtgatgcactaacttcagaaaatattagcgtatttcgttttgatttcactggcaatggagaaagtgaaggcacattccagtatggcaactattacaaagaggtggatgatttgcgtgatgtaattctacatttcaagaaacacaagcgtgacacccgcggtattgctggccacagtaaaggaggaaatgtggtcatcctgtattcatccattcatcgagatgtagctagtattattaacatgtctggaagatttgatctaagacgtggaattgctgatcgtcttggaagtgattatatggaaaagatagaccggtatgggttcattgatgtgggagtgaaaacaggacgttccatctaccgtgtaaccaaagaaagtctgatggatcgccttaagatagatatgaagagtgcatgcatgtctattgatcctaaatgcagggttctgacaattcatggttctgatgatgatattgtgccatcagaggatgccctagaatttgacaaatatataagcaatcatgaattgagtattattgaaggagctgatcatagatattcattgcatcaccttgagttggctaccattgtactgaaatttattaagtatgagtgagagaagattgttaaaataaatgtaaccatggcattatatgttttatttcaataaccttattatggttattcactgattcatttcactgtttatcttttgtttttccaaattctacagaatttaggaaaatatttctacttgagtgtgtactgcttcccacattgtactcaagctaactctgacaatggtagtgaatatgctaagcgtacatgaaatttaaagcttttttttcccatcgacaacttcctaactgtatttcctgtaatcctaccgccaattgcattattccatgttttgcttcagtgtttcttccgtttacctgtggaagttgctattttctggaacactaatgccatttagggtcaatgttttctgttttcagttggcacccaagcagaagatcagaattaagctgaggtcttactgggtaccattgatcgaggactcctgtaagaagatcattgaagctgcaaaaacaacaaatgcaaagacgatgggtccagttcctctgccaaccaagcgaagagtatattgtgtgctcaattctcctcacgtgcacaaagattcaaggttccattttgagatcagaacgcaccagcgattgattgatatcatgtacccgactgcacaaacaatagattccttgatgcagctccagctccctgccggggtagatgttgaggttaagctatgatttcatgattcacgtggagctggagttttaaaatttgctggtgtaatgtaatgctcttttctgatcattttgctatccgagacttgaacaaatgtagagcaacagggaaaaaagttcgtatatgaagtattgaatgagaatgtcactttatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0196800, RefSeq:Os03g0196800