Os03g0199100

From RiceWiki
Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0199100| Description = Protein of unknown function DUF677 family protein| Version = NM_001055818.1 GI:115451364 GeneID:4331959| Length = 35...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0199100

Description

Protein of unknown function DUF677 family protein

Version

NM_001055818.1 GI:115451364 GeneID:4331959

Length

3540 bp

Definition

Oryza sativa Japonica Group Os03g0199100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5241451..5244990

Sequence Coding Region

5242185..5243351

Expression

GEO Profiles:Os03g0199100

Genome Context

<gbrowseImage1> name=NC_008396:5241451..5244990 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5241451..5244990 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaacagcagcagcagcggcagccaccggcctccccggccggcgagctcggagtcggcgctgccgcccgcggcggcggcggcggaggagctgagctcgtacgaggcggcgtgccgatcagacccggagctgcgcacgttcgacaccacgctgcagcggcgcacgagccgcgccatctcgacgctggcggtgggcgtggaggtgcgttcgctgtccctcgagtccctccgcgaggtcaccggctgcctcctcgacatgaaccaggaggtggtgcgcgtcatcctcgactgcaagaaggacatctggaagagccccgagctgttcgacctcgtcgaggactacttcgagagcagcctccacaccctcgacttctgcaccgcactcgacaagtgcctcaagcgcgcccgcgactcccagctcctcctgcacgtcgcgctccagcggttcgacgacgaggaggacaacgacgccgccgccgccggccaggaggacgccgctccctccgcccggtacgcgcgcacgctccacgagctgcgccagttcaaggcggccggggaccccttcaccgaggagttcttcagcgccttccaggccgtgtaccggcagcagctgaccatgctggagaagctgcagcagcgcaaacaccggctcgacaagaaggtcagggcgatcaaggcgtggcgccgtgtgtcgagcatcatcttcgccaccaccttcgcggccgtgctcatctgctcggtggttgccgcggccatcgctgccccaccagtcgcggcggcattggccgcagctgcttccattccggtgggatctatggggaagtggatcgattctctactgaaagggtatcaggacgctctccgtggacagaaggaggtggtgagcgcaatgcaggtggggacgttcattgccatcaaggatttggacagtatcagggtgctcatcaaccgggtggagttggagatcagctcgatgatcgactgcgtagagttcgctgagcgagatgaggaggcggtcaagtttggggttgaggagatcaagaagaagctggaggtcttcatgaagagtgtagaggatctaggagagcaggcagatcggtgtagccgggatattcgtcgggcaaggaccgtcgtgctacagagaatcatccggcatcctagctga</cdnaseq>

Protein Sequence

<aaseq>MGNSSSSGSHRPPRPASSESALPPAAAAAEELSSYEAACRSDPE LRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRVILDCKKDI WKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEEDNDAAA AGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQRKHRL DKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMGKW IDSLLKGYQDALRGQKEVVSAMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVEFAE RDEEAVKFGVEEIKKKLEVFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS</aaseq>

Gene Sequence

<dnaseqindica>735..1901#ctctctctctctctcgccaaaagctttggttgcttgctcgcttcacccaaacaaactcatcgatccgggcaaaaacacgcgcaaatcgctgtgctacacctcctcgcgttcgctcgctacagcgcaccacatccacacacacgctcccagccccagcgatcgatggagtgagacgcatcaggttgcttccggcgacggccattgccgcctccctctccctccctccgcccgcgcgccgccacacccccccatcgcttcttcctttcgtcatgcgtacaagccatccccacatcaccaccaccacctcgcctgacaacagcagcaggagcgacgctccacaaaaccaccccccaaatccctccgtcccgtagcgcctactacccccgcctcctgcattcttctccttgcttctccgtaacctcgcgctttcttggccgcttcgcccgcgacgcaacgggggggagaggccttcctccgtttccttggataggataaagctcgcggatctccgctcaatccagttcttcattctcctctcccggttctgttcttggttcttggaaagccggtggggtgcgggtggctcgtggcgatcagtgctcgctcgtttgatccatcctagttgctgagacgtttcgtttcttgatcttggtgttactttccccaaaaatccaatacaaagatccggtggaggtctgatctgtgagcgacgcctgcccggtttccttccggcaatggggaacagcagcagcagcggcagccaccggcctccccggccggcgagctcggagtcggcgctgccgcccgcggcggcggcggcggaggagctgagctcgtacgaggcggcgtgccgatcagacccggagctgcgcacgttcgacaccacgctgcagcggcgcacgagccgcgccatctcgacgctggcggtgggcgtggaggtgcgttcgctgtccctcgagtccctccgcgaggtcaccggctgcctcctcgacatgaaccaggaggtggtgcgcgtcatcctcgactgcaagaaggacatctggaagagccccgagctgttcgacctcgtcgaggactacttcgagagcagcctccacaccctcgacttctgcaccgcactcgacaagtgcctcaagcgcgcccgcgactcccagctcctcctgcacgtcgcgctccagcggttcgacgacgaggaggacaacgacgccgccgccgccggccaggaggacgccgctccctccgcccggtacgcgcgcacgctccacgagctgcgccagttcaaggcggccggggaccccttcaccgaggagttcttcagcgccttccaggccgtgtaccggcagcagctgaccatgctggagaagctgcagcagcgcaaacaccggctcgacaagaaggtcagggcgatcaaggcgtggcgccgtgtgtcgagcatcatcttcgccaccaccttcgcggccgtgctcatctgctcggtggttgccgcggccatcgctgccccaccagtcgcggcggcattggccgcagctgcttccattccggtgggatctatggggaagtggatcgattctctactgaaagggtatcaggacgctctccgtggacagaaggaggtggtgagcgcaatgcaggtggggacgttcattgccatcaaggatttggacagtatcagggtgctcatcaaccgggtggagttggagatcagctcgatgatcgactgcgtagagttcgctgagcgagatgaggaggcggtcaagtttggggttgaggagatcaagaagaagctggaggtcttcatgaagagtgtagaggatctaggagagcaggcagatcggtgtagccgggatattcgtcgggcaaggaccgtcgtgctacagagaatcatccggcatcctagctgaaaaaaaaaaggaaaaagagagaggaaggatgcaaggtatggatgtgttagctacaaatcatgttctctttgatgatattgtaatgcaatgtacataaaaatacaccccatgtagaaagtgtgaatgagtcatttggtatgaattattatctgcttcattttattcatttttatgatatctgccttgttgttttgtttttatcaattgtaactatgtctaaatatatcccaaactagtagttgctagtgacagtcgcaatctgtcagccattgtcataatcatcacaatatcacacttggtccttagtcagatcatatctatctagcacttacccagaagtgttctaaggtccaagtttgttctcagagtaaaaaagaaaggaagtcattgtctactcttcatggtttttattgcattttagacgtgtaagtattggcttgtttctggaagtcgtctataattctaacttctaagtgaaggaaaaaaattaatttagaagatctggtttgtaagatatcatctttcagtgatgtaccaagttttgcttctgttcaaaacaataggtagaatcatgatataatatcatactctccaccatataatattatgtcatgtcgatcaccgttaatattctgtcatgctgatcactgttgaatttatcttttggatgttttagtccctgggctataagttcacttgtttctttagcattagtactaggttatatcgtttctttcataaaacatgagacattgctcagtctcaaagaccaaggatatatgcatttttcctcagagatataatatttttattttgggtgcttctattttgaataatactacatcgggatgaaatatggagcaagcaacttagcacattaaagtggttgtaagcagggtttgtgttaccggcctgttaccaagcaaaaatgacgaaaactacaaattttatcaaaaatttaaaattttgtttatttttttattaacttggtcgatatattggacgtttctgttgctgcacctcggcggtaagtctggcaatcacggtaactgaggataacgcaaaccctgattgtaaaatgctagctatttcatgaatgatgagtttaggtattgagcttctgcaaaattatactctggaacaattgttattctgaagaactgttgtagcagttcgttcagaaatcacattttaagctgatctagtatactagaaaagaatattgaagacctcttgtgacagcagggaatcggttgttaacttgatatcatcattcagaattaatattcgaagctgcacaagttttataaatcccatggaatccctctttgtttttaaaatctcaatgaaattatggaacttcatcctatagtatgaagttagcttgcgatgaagtgcagtttgataaagaaaacattgaattctcaccatgtttcccactgtttttgcaggaatttggtgatggcgatgcacttgaaagggtctatgacctagacaagcaagcaaacgatgtgatcagtggcctaaagcaacaaataatgctgtcagacttctgtgagccatcactattactgactttatttatcacctgtcctgatctccatagtttatcaatgtgtttggcgttctgtttttcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0199100, RefSeq:Os03g0199100