Os03g0201901

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0201901| Description = Glycoside hydrolase, family 10 protein| Version = NM_001186375.1 GI:297721880 GeneID:9269764| Length = 4783 bp| Def...")
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Gene Name

Os03g0201901

Description

Glycoside hydrolase, family 10 protein

Version

NM_001186375.1 GI:297721880 GeneID:9269764

Length

4783 bp

Definition

Oryza sativa Japonica Group Os03g0201901, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5358465..5363247

Sequence Coding Region

5358647..5359885

Expression

GEO Profiles:Os03g0201901

Genome Context

<gbrowseImage1> name=NC_008396:5358465..5363247 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5358465..5363247 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccatggcagagcaacgcgacggtggacatatgggtggacaacgtgtcgctgcagccgttctcgagggaggagtggagcgcgcaccacggggcggccatcaagaaggcgaggaagaagacggtgcggctccaggcgagggacgccgcaggcaacccggtcgccggcgcgcggatgcacatcgagcacgtccgcaacggcttccctctggggtcggcgatgagcaaggagatcctgaccaacccggggtaccagcggtggttcacgtcgcggttcacggtgaccacgttcgagaacgagatgaagtggtacagcacggaggcgatcccggggcgggaggactactcggtgcccgacgcgatgctccggttcgccaagagccacggcatcgcggtgcgcgggcacaacatcttctgggacgacccgagcacgcagatggggtgggtgaaggcgctctccggcgagcagctccgccgcgccacggagaagcggatcaagtcggtgatgtcgcggtactccgggcaggtgatcgcgtgggacgtggtgaacgagaacctccacttcgacttcttcgagggccggttcgggtgggaggcgtcggcggcgttctaccgcaaggcgcaccagatggacggcggcgcgctcatgtccatgaacgagttcaacacgctggagcagccgggcgacctgacggtgctccccggcaagtacctccgcaagctgtggcagatcaaggcgttcccggggaacggcaacgccgcccggatgggcatcggcctcgagggccacttcagcgcgcaacccaacatcccttacatccgcgccgcgctcgacaccatggcgcaggccaacgcgcccatctggctcaccgagatcgacgtcgcgccggggcccgaccaggcgcgccacctcgagcagatcctccgggaggtgtacgcccacccggcggtgcacggcatcatcctctggacggcgtggcacccgcagggatgctacgtcatgtgcctcaccgacaacaacttcaagaacctccccgccggcgacgtcgtcgacaagctcatctgggagtggaagacgcgctcccacgtcggcgtcgccgacgccgacggctactacgagaccgagctgttccacggggactacaaggtcaccgtcacccacccggcggcgaactccaccgtggcgcagagcctcagcgtcgacagggagtccgacaacgagttcaccatacacgtctag</cdnaseq>

Protein Sequence

<aaseq>MPWQSNATVDIWVDNVSLQPFSREEWSAHHGAAIKKARKKTVRL QARDAAGNPVAGARMHIEHVRNGFPLGSAMSKEILTNPGYQRWFTSRFTVTTFENEMK WYSTEAIPGREDYSVPDAMLRFAKSHGIAVRGHNIFWDDPSTQMGWVKALSGEQLRRA TEKRIKSVMSRYSGQVIAWDVVNENLHFDFFEGRFGWEASAAFYRKAHQMDGGALMSM NEFNTLEQPGDLTVLPGKYLRKLWQIKAFPGNGNAARMGIGLEGHFSAQPNIPYIRAA LDTMAQANAPIWLTEIDVAPGPDQARHLEQILREVYAHPAVHGIILWTAWHPQGCYVM CLTDNNFKNLPAGDVVDKLIWEWKTRSHVGVADADGYYETELFHGDYKVTVTHPAANS TVAQSLSVDRESDNEFTIHV</aaseq>

Gene Sequence

<dnaseqindica>3363..4601#ggcatgcacagacgacggtgcagttggcgcgcctgcctagcttagcttacaacatctctcgcgcgctcgctgcacctctctctctttccctctcgcttgtgcgaaacatcgtgggtttttttcttgccggaggaggggcaggggagggagccgggcgggattcagccatgaggaggagggcaagcgctgtgttcttgttggcgtggctcgtcgccggcgtggtgaagggtacgtagcagattcatggtcatggagctcgatctctccttctttgcatgttcttgcaatcttgttcttaggatagttaagttaaagaagctcgcgtttctttcatttcaccagctgctgaggcggcttctggcatggcgcgaccgcttgcttacgactactcgtcaagctctgaggtatgcagcctctctctctcgttctctctcaccattatcatcgtcaaatccatgcttcatggtaccaatgtgagcatggtcgttctttgcgtcgcactctcccacagctcatgcgtcatgcagaacctctgttggtcacatagttattggaccccactggaacatggtaccaccagctgctgttgactgctgcttgcacacaacctcgatctgctcagaccagtgcaacaaattaatactatgattaagattgcttagttgcttccctagttggctgagccagcagagatcagattgcactaattcgatcgacctgccttttgatcatgcaagcgtagtatgtgcagctaacaccggccgtcgttagttgggcgagccgatttgttactgacaggtgacacaagtgtgggcgcgctatgcgggccatgcatacatatgccggaatatttttttccttcttgttgttgcagttgcctttgtgtgatctttgccggcctcaccccactcaccagtcaccatcgagaccttctgcatgttgggtttgcgtaggcagggcctccctgacatgtttagtgctaatgtgaacgaagctacaattaggagcaagaatatgactgaagtttaattaaccattgatcatctggtagatggtggaaacagaccaaacaagcatgagggagatgaaatcttgcatgtttcagctgcaagatacctcacttaacaaaagaaaaaaaaaatctgtgaggagcacaccaagaaccgaaagcctcttcaaaagcctcccaaaaccgagccagttgccacagaaaaaaaccaaaagttagttcctcgtacaccgaacttggagaacctcaccacacacgtccatctatcggtctggctcgatcgtttcaacccttcaccatccaatccaaacttccaaatcggtcttctttaccacttcaattcgagcctaacaaaactcccgtctttgaactgtacatgctgcagttagcctaactgagaacccatcgtgcaacgcacccgacccaatcacgcacctatctgtgcttgttgtgaacacgatcttttttattggaaagaatcgttatgagcaccaggagcagcttgatcatggagccggtcaaagcgtgccggagtttgcaggggtagcttttttccggcgaacggcgagcaggagggcgtgtgtaccccattgtccgccacacgctgtattgggcaaatcatgcgctgatgctaacttttctcctggtacttgattagttggttggtgaagatgttgtctgtgttgtcctctgttctgactgtctcatcaccctgcacagtgaaactgcccggccaggataggaaagtcaaatgcttccaaacaagtagctttgtactgttcccgagtaattagctttaaccattgtcttttctgaacttttttctttgggtagtcttatgttagctgcagggttagacatataggtgccgtcacttgggacttttgaaggcaggtcaaagaattttgttgtgataggttcagcttgtggtcagaattagttaccgcacccaagtggaagaccaaatatgtgtaggttttggctttggcctgggtgataccgtaccaaacaaaatctggcatgtccataccgttctcatgctagtttggtcgacggttactgctactaatatcttgataggtacagttctgaagtctgaaccgtacataaccttttggtagtattaccttttactgtgatcttgacaggatcctttggtagttttgacggttattaccacgctgtaaagtgtaaaccaccactgcttctgtaacatttctctgaagtttttacattttcttgtgcaaatgatttatgaacagtgtatttcgttaatcttgattactgtacaaatttcctttatcacagtgaacgggagtggattctaatccctcgaggggatatcccctcatatacctttttctttcaaattcgatgcaaataattgtgaaaaattctgaaaaaaaattaacaatatagagtataatgatacctactagtccaccaaaattcatgttcaaattcgatctacacatcgagaaacaaaaaagacaaatttagatataaacagtacgctactattcatacgctgaatttgtcttttttatatctcgacgtgtgagttgagtttggacttaagattttgtagagttgcatatatgcgttgtatgaatgttgtcaaattttttcagaatttttcataaccgtttagatggtttttaagcaaacgagggaacatcccctcgagagattagaatagtttccccacagtgaacaactattactattttgttaccttcggtaaaatttgtttagctgaacaatgaagctatggactgcagtgcttgcctgagccgatggacgctcactacggtggcggcatcatccgcaacggcgacttcagcgccggactccagggctggtcggccttcgggtacggcagcctcgccgtgggctcgtcgccggcggggaacaggtacgccgtggcaacgaaccggacgcggccgtaccagagcgtcagccagaaggtgctcctccaggacgacacgcactacaccctctcaggtccgtccggcgacaagaaccaccgccgtcttgttcttccttcgccgtgttgtttccggtagctcatggaagctttgtgctcggtctcgtgtgcagcttggttgcaggttagtgacgggatcgccgacgtgagagccgttgtgaagacggccggcggcgacttcatccactccggcggcgtcgaggcgaggtccgggtgctggtccattctcaagggcgggctcaccgccgccgccgccgggcaggctgaactctacttcgaggtaaacgaatcgatcgatctcatcgccatagcaatcaagaattcaagattactctgtttctgacgagacggggatgcaatggtgtgatgccatggcagagcaacgcgacggtggacatatgggtggacaacgtgtcgctgcagccgttctcgagggaggagtggagcgcgcaccacggggcggccatcaagaaggcgaggaagaagacggtgcggctccaggcgagggacgccgcaggcaacccggtcgccggcgcgcggatgcacatcgagcacgtccgcaacggcttccctctggggtcggcgatgagcaaggagatcctgaccaacccggggtaccagcggtggttcacgtcgcggttcacggtgaccacgttcgagaacgagatgaagtggtacagcacggaggcgatcccggggcgggaggactactcggtgcccgacgcgatgctccggttcgccaagagccacggcatcgcggtgcgcgggcacaacatcttctgggacgacccgagcacgcagatggggtgggtgaaggcgctctccggcgagcagctccgccgcgccacggagaagcggatcaagtcggtgatgtcgcggtactccgggcaggtgatcgcgtgggacgtggtgaacgagaacctccacttcgacttcttcgagggccggttcgggtgggaggcgtcggcggcgttctaccgcaaggcgcaccagatggacggcggcgcgctcatgtccatgaacgagttcaacacgctggagcagccgggcgacctgacggtgctccccggcaagtacctccgcaagctgtggcagatcaaggcgttcccggggaacggcaacgccgcccggatgggcatcggcctcgagggccacttcagcgcgcaacccaacatcccttacatccgcgccgcgctcgacaccatggcgcaggccaacgcgcccatctggctcaccgagatcgacgtcgcgccggggcccgaccaggcgcgccacctcgagcagatcctccgggaggtgtacgcccacccggcggtgcacggcatcatcctctggacggcgtggcacccgcagggatgctacgtcatgtgcctcaccgacaacaacttcaagaacctccccgccggcgacgtcgtcgacaagctcatctgggagtggaagacgcgctcccacgtcggcgtcgccgacgccgacggctactacgagaccgagctgttccacggggactacaaggtcaccgtcacccacccggcggcgaactccaccgtggcgcagagcctcagcgtcgacagggagtccgacaacgagttcaccatacacgtctagctagctattagctcaatttattagctcaatgtatacgtatccatgtgcatgattgttgtgtgtgatttcatatgcgcccatggattgatttatcattcctggagaggcgattgattggatgttcatattaaaaggaagaagaaattccatttgttcttctttatatacatacttctcttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0201901, RefSeq:Os03g0201901