Os03g0206100

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0206100| Description = Protein of unknown function DUF566 family protein| Version = NM_001055852.2 GI:297600511 GeneID:4331995| Length = 48...")
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Gene Name

Os03g0206100

Description

Protein of unknown function DUF566 family protein

Version

NM_001055852.2 GI:297600511 GeneID:4331995

Length

4876 bp

Definition

Oryza sativa Japonica Group Os03g0206100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5574187..5579062

Sequence Coding Region

5574187..5574204,5574782..5574913,5575018..5575125,5575695..5575784,5575872..5575988
,5576103..5576222,5577878..5579062

Expression

GEO Profiles:Os03g0206100

Genome Context

<gbrowseImage1> name=NC_008396:5574187..5579062 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5574187..5579062 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggctgctgcggcagcggctaccgcgccagatccggcgcaccccgcgcgcccgccgctcacgccggccctcgacaagcccaactccgcccccgccgcgcgccgccccgcgcgctccagcaagccggtctcgtctcgctacctgtcggcggccgcgtcgccgacctcctccacctcgtcgtcgtcgtcgacgtcgtcgtcgtccgcgccgtcgtcgaaccgccgctcgctctccgcgcagcgcgcgaggtcgtccacccccccgccgcagcactcgacgtcgcccaccccggcccccgcggcggcggcggcggcggtggcggtggcttcggggggcttgacggcgaccacgatgcggagcctctcggtgtcgttccagggggagtccttcttctaccagacgtcgcgcgcgccgcgggcggcgtcgccgtcgtccccaggcgggcggcgcgggcccacgccggagcggcggaagagcgtgtcgtcggtgcccgaggccgagaacacgcggccgcagcaccgatggccggcggcgaagcccaaggcgtcggaccccctcgcccgcagcctcgactgcagcctggaccgcaaggactccatcctggctgccgtccacctgctccgccgctccatggcgttcgactccaccacatccctctccccttcggacccggccgccgccgccgccgcggcccacgacctctctgcatcctccgacaccgacagcgtttcatccggcagcaactcgggggccggtgatcccccacgccgcggcatcagcgtgccggcgaggttctggcaggagaccaacagccgccttcgccggcttccagaaccagggctaccgctaccatcatcctctggcaggagatcgttctcagacagtcaaatgtcaccgagactgcctggccgctctccatctccaagccgcggaagcaggggcatggcgagcccagcaagagggcggagtggggaggcatcacccaatggtcacacaatgcaggcgccggcaaatgcgccatctatcatcagctttgctgcagaggtgaggagggcgaaaaagggggagaacagaattgaggaggcacacaggctgcggctgctcgataatcgacatttgcagtggcgatgcatcaatgctcggacagatgcagctctcctggtgcagagcttcaatgctgagaaaactctgcacagtgcatggaaggaaatatcaaaattacgagacaatgtcagttctaaaaggagcaaactccagcttctaaaacaaaagctcaaactgttcgctattcttagaagacagatatactatctagacgagtggtctcatattgaaaaacatcattcaagtgctttgtcagcagcaatcgaagcactgaaggctagtactctccgtcttccagttgttggtggtgcgaaggctgatgcccaaggtgtgaaggaagctgttaactcagcggtggacgtgatgcacacaatggcatcctcaatgtgtactttgttgtctaaggtggaaggaacaagctctgtggtgtctgagcttgccaaacttgcaacacaagaacaaatgttgttggatcaatcaagagatctcttgtccatggtcgcagcaatacatcttgcaagctcatatgctacaacgaaagcaaaagcagagccagacacgggtgtagatcagtttgtcttgccacattggtggtcaactaacatcacacggcctcatcttttcacactggagactgtgctacagacttggttggcggcgtga</cdnaseq>

Protein Sequence

<aaseq>MVAAAAAATAPDPAHPARPPLTPALDKPNSAPAARRPARSSKPV SSRYLSAAASPTSSTSSSSSTSSSSAPSSNRRSLSAQRARSSTPPPQHSTSPTPAPAA AAAAVAVASGGLTATTMRSLSVSFQGESFFYQTSRAPRAASPSSPGGRRGPTPERRKS VSSVPEAENTRPQHRWPAAKPKASDPLARSLDCSLDRKDSILAAVHLLRRSMAFDSTT SLSPSDPAAAAAAAHDLSASSDTDSVSSGSNSGAGDPPRRGISVPARFWQETNSRLRR LPEPGLPLPSSSGRRSFSDSQMSPRLPGRSPSPSRGSRGMASPARGRSGEASPNGHTM QAPANAPSIISFAAEVRRAKKGENRIEEAHRLRLLDNRHLQWRCINARTDAALLVQSF NAEKTLHSAWKEISKLRDNVSSKRSKLQLLKQKLKLFAILRRQIYYLDEWSHIEKHHS SALSAAIEALKASTLRLPVVGGAKADAQGVKEAVNSAVDVMHTMASSMCTLLSKVEGT SSVVSELAKLATQEQMLLDQSRDLLSMVAAIHLASSYATTKAKAEPDTGVDQFVLPHW WSTNITRPHLFTLETVLQTWLAA</aaseq>

Gene Sequence

<dnaseqindica>4859..4876#4150..4281#3938..4045#3279..3368#3075..3191#2841..2960#1..1185#atggtggctgctgcggcagcggctaccgcgccagatccggcgcaccccgcgcgcccgccgctcacgccggccctcgacaagcccaactccgcccccgccgcgcgccgccccgcgcgctccagcaagccggtctcgtctcgctacctgtcggcggccgcgtcgccgacctcctccacctcgtcgtcgtcgtcgacgtcgtcgtcgtccgcgccgtcgtcgaaccgccgctcgctctccgcgcagcgcgcgaggtcgtccacccccccgccgcagcactcgacgtcgcccaccccggcccccgcggcggcggcggcggcggtggcggtggcttcggggggcttgacggcgaccacgatgcggagcctctcggtgtcgttccagggggagtccttcttctaccagacgtcgcgcgcgccgcgggcggcgtcgccgtcgtccccaggcgggcggcgcgggcccacgccggagcggcggaagagcgtgtcgtcggtgcccgaggccgagaacacgcggccgcagcaccgatggccggcggcgaagcccaaggcgtcggaccccctcgcccgcagcctcgactgcagcctggaccgcaaggactccatcctggctgccgtccacctgctccgccgctccatggcgttcgactccaccacatccctctccccttcggacccggccgccgccgccgccgcggcccacgacctctctgcatcctccgacaccgacagcgtttcatccggcagcaactcgggggccggtgatcccccacgccgcggcatcagcgtgccggcgaggttctggcaggagaccaacagccgccttcgccggcttccagaaccagggctaccgctaccatcatcctctggcaggagatcgttctcagacagtcaaatgtcaccgagactgcctggccgctctccatctccaagccgcggaagcaggggcatggcgagcccagcaagagggcggagtggggaggcatcacccaatggtcacacaatgcaggcgccggcaaatgcgccatctatcatcagctttgctgcagaggtgaggagggcgaaaaagggggagaacagaattgaggaggcacacaggctgcggctgctcgataatcgacatttgcagtggcgatgcatcaatgctcggacagatgcagctctcctggtgcagagcttcaatgctgaggtaaattatgttgacctatctggttttaagctataacattccaaaatcctcttactgttggttactcatagtatccaattatccactctatgtataaaacaattaatgttctactagtttcacttttattattgtgtttatttcacttcctaaatgcaaatgtgtgggggtacatttgggcctctggggtatctgtaatcagcaactgcacattctgtttcattatttgtttgaattcagaacaatttacaactcaatgggggtgcttgatcaatatgattactgaggtcatagtatttgttatatctcgcagacgaggaaagaatacaaaagttccatttttattgtgagatattagtctttgaggactgtagaagcctgataagtaagttggtatttgtagactactaaaaaggttgggactggttagctgcttatttactagtcctcacgatagttgcattgtaaactagggtgtgttatgctgcaagcgttgcatgcaaatcttgactaaaggagaaccaatggagctgctaatcacttgctccctgattttgaagaattgagttttgaatattcaccttcaacccatacctatcgattgtttatgatccattcagaagtcccatgaagcgtattaataaaaatagcactgtggggttcagtgcttgtagtggacttagtttggtgggcaaatgggcatttgggtgtcatattacgagagaatctactctatattgtatatagataaatttcagtagtcctttaattacttggttcacatcaaatatactgaaactgtaagatattttcacgtccgcagtcatgtcttgattattttatttaaaccatttttttctgtatgtaccacttcaaacaaccagtgctgtagcgcatttcaatcgcattcagtagctttagggtgtgtttagttcatgccaaaattggaagtttgattgaaattggaacgatttgacggaaaagttggaagtttgtgtgtgtaggaaagttttgatgtgatggaaaagtttgaagtttgaagaaaaagttgggaactaaaccaggccttacatttcaaagaaatgttatggcagatttgcccaaggagacttcttttagtattagtgtgaatggttggacccatacccctttgtttctgtactgttaggttacaaaaggatactggcgcgatgttgctagggatgttggcagtgtcaggatttagatgacttaactcgtaaatcgtagtctagtgacttgtcaactttattgcactattagcggctgataacttgattgaaattatttcttggtcaataaagtcatctgggatatatcacctaggtccttgtactgcctttgattaatgagagaaacagcctagataccaaattttacatttctccatctttggttccaatttggcaatgcctttgaatcaaatgtattgttttagattccagatatggatttatgtgaaggtgcactgttttgttatttttctttgatagctgtgtacattggaataaaccatttgttttcaaatgtatttgttctgacacttaatacattgagctgtatgctccatagaatgaaaatctaaaaagggttgagctactattctaactaatgttgcttatttcactatttttcagaaaactctgcacagtgcatggaaggaaatatcaaaattacgagacaatgtcagttctaaaaggagcaaactccagcttctaaaacaaaagctcaaactgttcgctattcttagaagacaggtaaaagagattatatctattattgttttagctatttatgcagtttgcactaggatttggtagcatttctggcaaagttgattgtatctaagtgcttctatttgacatgttcagatatactatctagacgagtggtctcatattgaaaaacatcattcaagtgctttgtcagcagcaatcgaagcactgaaggctagtactctccgtcttccagttgttggtggtgcgaaggttaggatttttttcataatacaatatagttatctgatatgatttgatatacccctttggatagttttaatgtttctctctgagcaggctgatgcccaaggtgtgaaggaagctgttaactcagcggtggacgtgatgcacacaatggcatcctcaatgtgtactttgttgtctaaggtgcatatgtcctatccttcttctccttgatatctcttttatcaagaatgtaattttcatatctaaattgcaaagtacgtagattctttaggtccatcctgatgggtagctatggtcatacataattgtgtactcttccggcatatatatttttgtagctataaaatctgagagataagacaatttccttgtggccaattacctgagtggacagctaacaactgcaaatctttcatgaatgatatatttgatccagcgtgcattcaaatctattgaggtatttacaggtttatggaaagttggaatcctagaatcccaaggaaaacatgcctattttttatgtttatatcgaacttgaatcactgcattgaatataagctggctaaccagaaccgcgatttgtctgtaaacataagctaggtgtactgcaggtgtttgcctgttatgtgaacattacttgatttgtaaggccttggacaatgaggcgactcttacatgggcatgcatttcatgtaattcatggcgtatttgctgtggcaacctctgaatcatgttttattggtcttcaggtggaaggaacaagctctgtggtgtctgagcttgccaaacttgcaacacaagaacaaatgttgttggatcaatcaagagatctcttgtccatggtcgcagcaatacatgtatggagaatttctgtaatacttttatttgattgtacccttgtatattgttgtttggctcattgtgttaattatatatttgaaaaacaggttaaacagtgtagcttgcaagctcatatgctacaacgaaagcaaaagcagagccagacacgggtgtagatcagtttgtcttgccacattggtggtcaactaacatcacacggcctcatcttttcacactggagactgtgctacaggtaataaaagctgtaaccatttgttgggtgtgaagtgtgtcctaatctgctttgatctcaccgagtgtagctgattcatgtaattttttgagtgcatatcaccatagaaatggccccttttacctgcaacagttgctgcagtggatgtatacagagaacctagtgttgaccaaggatgagctttctgtagatatgaaaaaagcttgtcgtttgcgtgcctagctttgctgtgttgcgtgcctcgcgtgttgatgattggtgttttgtattctggaatggaaacagttgttagtttgatacgggtgttttcatggcaaattaacatgcaagttgttcattctaacttgctccggggcagtatacagacgttatatgtatgtctcatgcttatcctggaactaattcgtagcgcactaaaccttgttgtgattgctgttgttgagtcgtgccttgtgcgacgtgtattggtccttagttttggggattccgagaagtccctagaacacacaattcacctacatgttgaactacactgaaatccaaaatttcattttgagacgtgcaatgcagagtctagacttggttggcggcgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0206100, RefSeq:Os03g0206100