Os03g0207200

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0207200| Description = contains InterPro domain(s): IPR010989| Version = NM_001055859.1 GI:115451446 GeneID:4332002| Length = 2907 bp| Def...")
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Gene Name

Os03g0207200

Description

contains InterPro domain(s): IPR010989

Version

NM_001055859.1 GI:115451446 GeneID:4332002

Length

2907 bp

Definition

Oryza sativa Japonica Group Os03g0207200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5637163..5640069

Sequence Coding Region

5637735..5637763,5638269..5638452,5638556..5639203,5639690..5639846,5639945..5640021

Expression

GEO Profiles:Os03g0207200

Genome Context

<gbrowseImage1> name=NC_008396:5637163..5640069 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5637163..5640069 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgtcgttcgaccgctgggagaaggaccccttcttccccgccgccgaggaggtgcagggatccgccgaccgcatggagtcggtgtacaggatatgggtgcaggacaggagtgggggcgattcggaggcggcggcggcggcggctgctgctgccgtgggtggaggagggctccctgccggcgagctccgccgcgagctgcacactgcgctcggcaccgccaagtggcagctagatgaattggagcgggcaattagatcaaacgacaaggttttctcagctggaaaggacacaaaagcacggcatgatgactttgttgcggcaatcggttgtcgcatacttgaggttgagaacaatttgaaagaatccaatgttgcagagggaaggggtgccctaagctggattgatttggatgaggatgaacggaatgatcttgctaccttcctatctgcaagctcttttcaacagcgagacaaagtagttacaattccatctgttggtgatattgatgtgggcaacaatgcagcaatggttaaaaaggatatgtatgctgacagctccaaggattctggctccgctgagttgagttcagcaagagtaaaggaagaaacgcatcgtgggcacagaagggctgctagtgcccatgctgatatcgggtcatggactatgttatgtccaaatgagagcgagagttctgctgacctaccatatgatgacaagcaccaagaacctttgctgaagatagtgaaaacatgtgcactgacgagtgccttgcaatctaagcctagaacgaagaaaaaaggtggatctgtgaaatgggccgctgttgatcaacaagatgtggaagagacaatccctctcagttctcagatgggtcagggatcggatagatgctttgaaagaagcaagagttgtgtaagtacttgtgatgagagtacatacaataagaaactttatggttgtcttggagccctgcatagacgactgcagaggtcgcgatatcgaattcggtatgggcgtcctgttcaattaattgtgttagcagttgctgccctcttaatattcatgtgtgtattcaagaaaatttggtga</cdnaseq>

Protein Sequence

<aaseq>MATSFDRWEKDPFFPAAEEVQGSADRMESVYRIWVQDRSGGDSE AAAAAAAAAVGGGGLPAGELRRELHTALGTAKWQLDELERAIRSNDKVFSAGKDTKAR HDDFVAAIGCRILEVENNLKESNVAEGRGALSWIDLDEDERNDLATFLSASSFQQRDK VVTIPSVGDIDVGNNAAMVKKDMYADSSKDSGSAELSSARVKEETHRGHRRAASAHAD IGSWTMLCPNESESSADLPYDDKHQEPLLKIVKTCALTSALQSKPRTKKKGGSVKWAA VDQQDVEETIPLSSQMGQGSDRCFERSKSCVSTCDESTYNKKLYGCLGALHRRLQRSR YRIRYGRPVQLIVLAVAALLIFMCVFKKIW</aaseq>

Gene Sequence

<dnaseqindica>2307..2335#1618..1801#867..1514#224..380#49..125#ggccatttccgactttccgttgccctcgtctcccccttctcgctcgcaatggcgacgtcgttcgaccgctgggagaaggaccccttcttccccgccgccgaggaggtgcagggatccgccgaccggtgcgttgccgtctcctcccccgttttgttttttttttcggttgggggttcgtcgcgttcgtatggatctgatggtgattctcggtgtgtctctgtagcatggagtcggtgtacaggatatgggtgcaggacaggagtgggggcgattcggaggcggcggcggcggcggctgctgctgccgtgggtggaggagggctccctgccggcgagctccgccgcgagctgcacactgcgctcggcaccgccaagtggcaggtgaattggttgctctctcgacatccatttctctgctgtatactagcgtctagccatggcacgatcggcggtaattgctcttctgtgtcgtggtgatctgtggttgacgaatgccttttgcccctaattttctaaattattaggatacctagaaacatagttcattgcttagagcaggaagacacgtaacgtggtatgatttgtttgttgttatgagccactgatgtttgcttcttgaaaatcatggtttttaccaattacgaattgtggtaaatgagaacttttttttttattatacaaaacctgcatttatgtagatcatgtcatttaaggtgctttgagccctaagtggaatgtagttcccctcctatctgatctatgtgaatatgagaagccaatttgtcccatatgtgttaatttcaatttcagggattttatattgaaaattgatggcaaaagagtctaatagttgtgttttgtttctagctagatgaattggagcgggcaattagatcaaacgacaaggttttctcagctggaaaggacacaaaagcacggcatgatgactttgttgcggcaatcggttgtcgcatacttgaggttgagaacaatttgaaagaatccaatgttgcagagggaaggggtgccctaagctggattgatttggatgaggatgaacggaatgatcttgctaccttcctatctgcaagctcttttcaacagcgagacaaagtagttacaattccatctgttggtgatattgatgtgggcaacaatgcagcaatggttaaaaaggatatgtatgctgacagctccaaggattctggctccgctgagttgagttcagcaagagtaaaggaagaaacgcatcgtgggcacagaagggctgctagtgcccatgctgatatcgggtcatggactatgttatgtccaaatgagagcgagagttctgctgacctaccatatgatgacaagcaccaagaacctttgctgaagatagtgaaaacatgtgcactgacgagtgccttgcaatctaagcctagaacgaagaaaaaaggtggatctgtgaaatgggccgctgttgatcaacaagatgtggaagagacaatccctctcagttctcagatgggtcaggtacagatggcatccttgaggagtgcaaatattcattgtccaacaatgctttcatttgaatacattctagttctctaatgctgtagggcctttccttctgtagggatcggatagatgctttgaaagaagcaagagttgtgtaagtacttgtgatgagagtacatacaataagaaactttatggttgtcttggagccctgcatagacgactgcagaggtcgcgatatcgaattcggtatgggcgtcctgttcaattaattgtgttagcagttgctgccctcttaatatgtaagtttgttaattgttacatgtttgttatttcattttcattggacgagcaaacagaaaacaaagcctagtattgtcagttgtggtctttgaatgaccagttagcctgtcaattgacatcttgttctagttactgaaccactgaggtactatggattggtttattattcaatatttaaagcatggtttactaaatatatttaatgttgtgatagtcttattgcactcatccaaaatgttgcctgaataaattatgatacaatgctgccatattgttttctttttatatttttctgttgctcatgcattcgccggttggtgcaactgtcctatactggcatgttaggtctaacattttgtttttttagtgtacacaccgttgtaactttttattggcactaacaatcctggagtctctcgactagccgattttctcagttttctgttacagccttctacagtttttcatttgctattataccttacggtttactctaccttgcagtcatgtgtgtattcaagaaaatttggtgaccttttgatgggctcatgatttccatagaagcctcaccacagcagcttgcgaggttctaccatttttgcctgcatagctcatataactggtgttgaacaggcatctgaggcatgaagaatgatcagactggagcagcttatcgcattgactgtacagaagtgtgctgcatcaggatgtcatcggaaatgcagtgtgctgcctgcatgatgcacctcaagatcttgatcctcaccatggcctgttgacatatgcaacaccgtgtagggcccgctttggaaagttggaagagtggtggaatttcctttgtgaaatatatcttctgaacccctcattcatagctggttccatgagaataggttctgaagtgaaatgtgtaagatgctagaacaattgccacacaatcagaagctagcccgggctatccggctctagaattagaattttgatgcctctggcattacgtttgttaggctattaattaaaggagctataaggggtagctaaatgtattgcgatgtttgaaacttctgcactgttcgcgtgttatatgaaagactaatcttcttgagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0207200, RefSeq:Os03g0207200