Os03g0209600

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0209600| Description = Similar to MEtRS (EC 6.1.1.10)| Version = NM_001055871.1 GI:115451470 GeneID:4332018| Length = 7478 bp| Definition ...")
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Gene Name

Os03g0209600

Description

Similar to MEtRS (EC 6.1.1.10)

Version

NM_001055871.1 GI:115451470 GeneID:4332018

Length

7478 bp

Definition

Oryza sativa Japonica Group Os03g0209600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5748440..5755917

Sequence Coding Region

5748491..5748769,5749232..5749378,5749471..5749620,5750036..5750203,5751176..5751300
,5751756..5751849,5752686..5752784,5753572..5753752,5753893..5754008
,5754600..5754755,5755068..5755196,5755396..5755560

Expression

GEO Profiles:Os03g0209600

Genome Context

<gbrowseImage1> name=NC_008396:5748440..5755917 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5748440..5755917 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgggcgggccttcctccgcgccgccccctcctcgctggccgccggcgccggacgcttcgccttcgcgtgcccgacggcccttcccctcactgccgccgccgcggcggcgaccgggccacaccgtcgcggccgcggccgatgctactgctccgcctccgatgcgccgccgccgccgccatacgtgctcaccacgccgctctactacgtcaacgccccgccgcacatggggagcgcctacaccaccattgccgccgacgccatcgcccgcttccagaggttgctggataagagggtcgtatttattaccggaacagatgagcatggcgagaaaattgccacttcagcagaggcttgtggtagaaacccaaaggatcattgtgatacaatttccaattcatataagatgctttgggctgatctagacatagagtatgacaagtttatccgcacaactgatcgtaagcatgaggcagttgtcaatgacttctattccagagtgctagatagtggtgacatatatagagcagattatgaaggactttactgtgtgagctgtgaggagtacaaggacgaaaaagagcttggggaaaacaaatgttgcccagtgcatctaaagccttgtgtaccaagaaaggaagacaactatttctttgccttgtcaaaataccagcatcaactggaagatctactgacaaaaaatcctaattttgtacggccatcacatcgcttgaatgaggtccaaggatgggttaaaagtggattaagggacttctctatttcccgtgcatctgtagagtggggtattccggtgccaaatgacaccaaacagacaatatacgtgtggtttgatgcattattagggtacatttcagcattactagatgatggggagaaggcaagtttacaacaagcagttgaacgtggttggcctgcctccctacacttgataggaaaggacatattgcggtttcatgcagtatattggccagcaatgttaatgtcagcaggaataagtgttcctgatgcagtttttggtcatggatttttgacaaaggatggcatgaagatgggaaaatcattaggcaacacacttgaaccaaaggatctggtaaacagatttggagtagactctgttaggtacttcttcttgcgggaagtggaatttggcaatgacggggactattcagaggaacgctttatcaatatagtcaatgcgcatcttgccaacaccattggaaacctcctcaatcgcacacttgggctgctaaagaagaattgtaaatccacattagcttttgactcgattgctgccgcagatggaatttcattaaaggataatgttgaaaacttggtggacaaggcaaaggatcagtttgaaaatcttttgctgtcatcagcatgtgaaactcttatggagattggtaacttaggaaacttgtacattgatgagcaagcaccatggtcttgtttcaagcaagggggtgagagtgctgaaaaggcagcgaaggatcttgttattattttggagactatgagaataattgcaattgcactatcaccgatcaccccaagcctttctttgaggatttatacacagcttggtttcacagaagaccaatttagaacattgagatgggaggataccaaatggggaggtctaaaggcaggtcaggtaatgatggagccaaagccagtttttgcaaggatagaaacagagacggacgagaaagatcaatcaagttcgaaggcaacaaaaggcgggaagaagaaggcaagaagtcaaggacttgtggaagcatga</cdnaseq>

Protein Sequence

<aaseq>MAAGRAFLRAAPSSLAAGAGRFAFACPTALPLTAAAAAATGPHR RGRGRCYCSASDAPPPPPYVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLDKRVV FITGTDEHGEKIATSAEACGRNPKDHCDTISNSYKMLWADLDIEYDKFIRTTDRKHEA VVNDFYSRVLDSGDIYRADYEGLYCVSCEEYKDEKELGENKCCPVHLKPCVPRKEDNY FFALSKYQHQLEDLLTKNPNFVRPSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPND TKQTIYVWFDALLGYISALLDDGEKASLQQAVERGWPASLHLIGKDILRFHAVYWPAM LMSAGISVPDAVFGHGFLTKDGMKMGKSLGNTLEPKDLVNRFGVDSVRYFFLREVEFG NDGDYSEERFINIVNAHLANTIGNLLNRTLGLLKKNCKSTLAFDSIAAADGISLKDNV ENLVDKAKDQFENLLLSSACETLMEIGNLGNLYIDEQAPWSCFKQGGESAEKAAKDLV IILETMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWEDTKWGGLKAGQVMMEPK PVFARIETETDEKDQSSSKATKGGKKKARSQGLVEA</aaseq>

Gene Sequence

<dnaseqindica>52..330#793..939#1032..1181#1597..1764#2737..2861#3317..3410#4247..4345#5133..5313#5454..5569#6161..6316#6629..6757#6957..7121#aacgcgacccaaccaaaaacccctcctcctctcgccgcggcctccatcgccatggccgccgggcgggccttcctccgcgccgccccctcctcgctggccgccggcgccggacgcttcgccttcgcgtgcccgacggcccttcccctcactgccgccgccgcggcggcgaccgggccacaccgtcgcggccgcggccgatgctactgctccgcctccgatgcgccgccgccgccgccatacgtgctcaccacgccgctctactacgtcaacgccccgccgcacatggggagcgcctacaccaccattgccgccgacgccatcgcccgcttccaggcaagcaactaaagcgagcaagcctatgcgcgcgcgtttgcgttccattgctgctcgcgttctaatcccagtctagggattttgagtacgtcaaactgttgataccttagaaatctatggagttctaacacgtccaattgtttaaatgtctcaagtgaggccactcaagtgcatatatgaactgagcaattcatatgggttgtagagaacgatatgccattgtcaggtactagtatgagtgcatatcgtgtcactttctattcatgcccttaatctcgatgaatttcatatggggttacaataaaaatacgacaacttaaacctgtgcagttttgatgcacgttttgtctgttcaatgatctggccaccaatttttgattaatattattggaatgaaatgtgtagtatctgttgatcagctctcgcaatctaagtgtgttaatgctacttttatggtcgcagaggttgctggataagagggtcgtatttattaccggaacagatgagcatggcgagaaaattgccacttcagcagaggcttgtggtagaaacccaaaggatcattgtgatacaatttccaattcatataagatgctttgggctgatgtatgtccacaattctaggtgttttcattcaccacatggaataaatgctgagctcatttttttcttccaactttgttacacatttcttgcagctagacatagagtatgacaagtttatccgcacaactgatcgtaagcatgaggcagttgtcaatgacttctattccagagtgctagatagtggtgacatatatagagcagattatgaaggactttactgtgtgagctgtgaggagtacaaggtaagcttctgtttttacttccccatgtagtagtactacactacttcttccttttaggggaatatagaagggcacttacctaataaaaaaatatgattaatgtaggtatttgataatgatgttcagcatgcaatcttgcgaacaacatcctgtgcctacagatgttttaggttttaactttataattttggtccttcagaaaccagacacaaaatatgtgagttttgttaaaaaaaaaactatttggggatttttttttctctcgaaaatgccggaggacatacttttaggggaattatttttctgtattttcgttcttttcatgctttacagttgttgccatattcacttatagatcatccttctttttccaacattggtaattgtgcaaattctggttttgtttgaagtacaggacgaaaaagagcttggggaaaacaaatgttgcccagtgcatctaaagccttgtgtaccaagaaaggaagacaactatttctttgccttgtcaaaataccagcatcaactggaagatctactgacaaaaaatcctaattttgtacggccatcacatcgcttgaatgaggtgatgctataatcctcattcttatgaatcaaaatttgttttcaatctattttattttatcaatttattgcacattgctggtgtattgagttaacacacatcgttggtttattgagtcattgtacttcgctgcaaactgtggtgaagtgtaaaactgtccgttggaatgttgactctaattatatgagttgattattgacaaataaaggacaaaataactaggttacacatatgtgcttggaggtctgccacagtcatgttaaagaatatctgtgttacagagtatcaaatatgtacagttacaaaccaaactacgtctgtttcgttaggcctttctttttgctaccaggaagtactgttcgcatactgaacaaacaaccttgtaatttattttcttatgaaaaacttatcaaactgttattcagatggcatcctaaccagttaatgatatggtcaactcattcatcatatctccaggacttgaaaagggcctgaatttggcctactcacatgtgcctttagtttctacagtaatataaatgactgtgaagctaagtgcataacgcttgaaatttagtcattgtgtgattccttttcttttgacttctcaatgtgcatatgtggagaagtgcatgccagaagcaaggactgatgtgactcttaacatttctaaattaaaaccttctattgtttcctgaagaaagccagaaagggctgtgcttcttcttaagtcacaaatattgcgcttactattagaatcttatgggaatcaacttgccagggaaacacatgttccttttttactgtaataatataaacaggcaattatcatgtagtgtatttgtattgttcaagattcatattgatgttttatatcatatgtttatggacagtctttcagtatgcatatgatttttgtttgtgttttcaaatatagttgttctttaccctttctgattaagacagttgtaggtccaaggatgggttaaaagtggattaagggacttctctatttcccgtgcatctgtagagtggggtattccggtgccaaatgacaccaaacagacaatatacgtgtggtttgatgcattattagggtatgtttctctgcttctttacatgatattcattaatgtgtgctcctgtttactagtcttgctgggaatttattatactagtcgtgcttttatttcttcgaactcacaactttctataaataaatgaagactgcttctgtttctaacttttagttgttgtccatgtttacattttcgtagttcattgaattcttatgattcgtcgttcctggatgtattactgcctgtagtgtttcactctactctctgttaaactctgatttctctgaatcttcagaagtgttctgatatcttatctctaatggcactcctgatatacctcatgaatgtttgttatccatttcaccattactactaaagatcctatgcctataaatgaatacataatcttatatattatcccactctcttttttttttcagactgattgttttattttcatatgttgtgtttaggtacatttcagcattactagatgatggggagaaggcaagtttacaacaagcagttgaacgtggttggcctgcctccctacacttgataggaaaggtggatttcaggcgtattaacagtttcaaccattcatgctccttctcatttctagcaaattctgtttgcttctcttctcatctacccttagtttatttgttcacgttgcttgatatgttcttgcgatgataaggataactctggcgtgggctgataactaagcactgatgatgcttgagtctcagaataatcatcaactaagtattaaaaaaactgtggttctattgggttaatcatcaatccagattattgggttttttcattctataatatttttaatcatgtgttattacagttttccatgctctaaccttatattgggcactgtgaacatttccttttaaatttttatctccttggtctgtgcacagatagagatggtaggtggaaaattattctggagtggattggatgttaattttgaaaataatcgttgacaaattcttgttcggcatgccttagttgaaactgttttgacagaattaggccctgataaaaattgacagaaataggattagctaggacatcaatgataatcggccttcttctaatacgataaatctgattattttcacatttttcctgactcttataatgccaagacacactttacttctctttatctactgctttgagtatttgtactattccttctccattgtaatatagggctgtagttaatgctgacagatttatctggcatcacctatgcagtggacattgatatttatgtccagtgtacaggcaagaatgttggatgaacttcttgagttttatttctattttttattttgttataatatggtttatgatgattctttgtacatctacctcaggacatattgcggtttcatgcagtatattggccagcaatgttaatgtcagcaggaataagtgttcctgatgcagtttttggtcatggatttttgacaaaggtgatcctacctattttcatcgttattatttccatttctacagatcgatgacagcatagcactgtaccataagtaaacagtaatggaacctgtttttcctgcaactcatgttcattttcctgatccgaacatttggatgtccatgctggatgatgattattattatttatcctaatgttctgtttacagctttaacatcccttcttaaaaataaactctccaggagcatgaagaagctatatacttcaattctatattaaaaaaaaatcctggactaccctcttatagatctttacaaaatatcatctctatgactctaccgtagcatgcaccgtgttttgctttagatagcagtctatgttttctgctgattatagtgtatatgggctttcctcttatgttggttggtatctcaaatatagtcatacaggtagcagcaatgtagcttatagaaaatattatgtggtttttttgccacatgttccgtggtgttaaagttttatttatttatttatttttgccgggtcggccgaaagattcggtcgaccaatttcattaagagagagagatagatgtggtgttaaagtttgtaactctcgtacgcgaccttccagttgtaactattatgtcttctacattatctggaaacaaatatcaatcttatattccatgagaaaggtttcagtggtgaacataaagaactgtttacaggttctctgtttgctacttatctcatccagtcacttttatttcatgcagcaatgctttttattttgaaaaattttaggatggcatgaagatgggaaaatcattaggcaacacacttgaaccaaaggatctggtaaacagatttggagtagactctgttaggtacttcttcttgcgggaagtggaatttggcaatgacggggactattcagaggaacgctttatcaatatagtcaatgcgcatcttgccaacaccattggtatttctactcaaagcacctttgtttctggagtataaaacgtcttgatggcttttagatttttctttagctggtgtagaagtttttcaccaatgcgcatctttatttgttgttaatgatcattctctcatcttaaacaggaaacctcctcaatcgcacacttgggctgctaaagaagaattgtaaatccacattagcttttgactcgattgctgccgcagatggaatttcattaaaggataatgttgaaaacttggtaagtcctcttggcatctataaactacaattggcggagtcaaggaataacattttaaatgacaaatcttttgttaagttcttgttgggcatggcatgctcaaaatcgctttagtaaaagactttgcagaaaataattctgaatgtacattaaaaatcttgaattcttgaacatgtagcagttgctcctcaactgaattataatatgcatatgttttggaggtcacttcaagtccatttgtgcttttaatgtgtatatcattgagataaactgatcatttattgctgtgtagtatcttccaaatttttatttatcagcctacatgctacaaccaaataaacggaccgacttttaccatgctagctaaactgattcatgatttatgcatatgctattcattatattagcacgtgatggcaaggacttcacatgatttttgtcagtgatatattggtttcatttgttcttccaaatctgttttgcatctggatatttcagaacaccacctgccatccatttactcttatccggatctttgcatgctctgttgtgtatatgttggtttgcagatgtataaacttttttatgcaggtggacaaggcaaaggatcagtttgaaaatcttttgctgtcatcagcatgtgaaactcttatggagattggtaacttaggaaacttgtacattgatgagcaagcaccatggtcttgtttcaagcaagggggtgagagtgctgaaaaggcagcgaaggtaattatttaaaattgtcacagtttgtcttacttgtttcagatttcagatgcctgcatgagtctgaatgtaccgaccagcatcaataaataaaatttgcaatatattttcttctggtgctattagatataagccacaaaatctgatctcatgtggaataatcgttataggaatttgaagcattgaactcatatttatggacctatttttttgcctgtattttggattggattgagactaatcacattgttgtttggtttgtgattttgagatataacttgttcagttaattctgcctccaactatcttcaggatcttgttattattttggagactatgagaataattgcaattgcactatcaccgatcaccccaagcctttctttgaggatttatacacagcttggtttcacagaagaccaatttagaacattgagatgggtatgctcttaagactaagtgatatttctctttatttatatttcccagtatttcatggttattatcctcgaatatatataatccaacacccttgcagaaaatacaaggtttgcacactagtattgtgaacctggaggttgggttttcctatggtatgactagacaacctagcatataatttgtcaactatgccctgcaggaggataccaaatggggaggtctaaaggcaggtcaggtaatgatggagccaaagccagtttttgcaaggatagaaacagagacggacgagaaagatcaatcaagttcgaaggcaacaaaaggcgggaagaagaaggcaagaagtcaaggacttgtggaagcatgagtcaagtttgtgatggtgtacatagcataaaactacctgcgaccttgtcgcttggtgacaaagaaggcctgaagcattttcttggggcgaattggtttctgcaattttgttctaacactggctttccaattccaagtagtacatactgatactgatagctgagttaattccccactcccgcaatgttttattccagtgaacgcagctattgcttctgtttgttattggaataatggagcatcctgagctcatccatctttatcgaatttagattaaatcttttgtacgattcctaacatgacatttatggaattgggagcaccctatttaagagggaaaagatgcatttgatggagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0209600, RefSeq:Os03g0209600