Os03g0215000

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0215000| Description = Conserved hypothetical protein| Version = NM_001055909.1 GI:115451546 GeneID:4332057| Length = 4039 bp| Definition ...")
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Gene Name

Os03g0215000

Description

Conserved hypothetical protein

Version

NM_001055909.1 GI:115451546 GeneID:4332057

Length

4039 bp

Definition

Oryza sativa Japonica Group Os03g0215000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6040497..6044535

Sequence Coding Region

6040922..6042031

Expression

GEO Profiles:Os03g0215000

Genome Context

<gbrowseImage1> name=NC_008396:6040497..6044535 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6040497..6044535 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctaatctatcagagccctcaaaagaagctgcatcagctgatgattcaagtgctgtccagaaaactggagcatggagtaacacgttgaacattcttctgcaacaagcttcagtctatggtgtggctgctggttattgcctgtcagcatccctgctctccattatcaacaaatgggcagtcatgaaatttccataccctggagcattgacagctttacagtacttcactagtgttgttggagttctcttatgtggacaactaaagcttattgagcatgatggccttaatttgaggaccatgtggaagttcttgcctgctgcggtgatgttctacatctccatcttcacaaacagtgaacttctactccatgccaatgtggacactttcatcgtgtttcgctcagctgtgccaatttttgtggccattggagagaccctttatcttcaccaaccatggccatcactcaagacatggctttcactttcaactatacttggtggaagtgtgatctatgttttcacagacaaccagttcactgtgactgcttacacctgggcagtggcatatcttgcaagcatgtccattgactttgtctacatcaagcacgttgtcatgaccattggcctgaacacatggggccttgtgctttacaacaatctggaggctttgatgctcttccctcttgagatgcttctaatgggggagcttaatcagatgaagggcgacagcgctaaagtgacaaactggctttcatctgatgtcattcttcctgttgctctgtcttgcttgttcgggctatctatatccttcttcgggttctcctgcagacgggctatctcggcaactggatttaccgtgctcggtatagtgaacaagctcctgactgttgtgattaatctccttatctgggacaagcatgcctcctttgtgggaacaattgggctcttgatctgcatgtccggtggtgttctctaccagcaatccaccacaaaaccaaaggcccccaaggctgagccaaaagaggagaatgatgaggagcagcagaaattgctggagatgcagcaagggctcgaaagtagctcaactcagaagcaagcgtcatcttaa</cdnaseq>

Protein Sequence

<aaseq>MSNLSEPSKEAASADDSSAVQKTGAWSNTLNILLQQASVYGVAA GYCLSASLLSIINKWAVMKFPYPGALTALQYFTSVVGVLLCGQLKLIEHDGLNLRTMW KFLPAAVMFYISIFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLHQPWPSLKTWL SLSTILGGSVIYVFTDNQFTVTAYTWAVAYLASMSIDFVYIKHVVMTIGLNTWGLVLY NNLEALMLFPLEMLLMGELNQMKGDSAKVTNWLSSDVILPVALSCLFGLSISFFGFSC RRAISATGFTVLGIVNKLLTVVINLLIWDKHASFVGTIGLLICMSGGVLYQQSTTKPK APKAEPKEENDEEQQKLLEMQQGLESSSTQKQASS</aaseq>

Gene Sequence

<dnaseqindica>2505..3614#cccatcgcatccgcatctcggcatctcgcgtcgcgacccgcgacccgcggcggcgcgtcccgaatggcggccgatcgcccgctcgcgagggttgatgagatagcaaggcgccatttccaaatatttcgatccgcagcgtaatctctctcgcgtgcgccggtgcgcgatcccctccctccctcctcctcaatcccccagatcgcgtgcgccgcgggctctccccgcgttgactctccagcatctagatccgcgcctgcgctcccgacgaggtcggccggtctacggtcaccctcgtggtttccattgacttgtttttctcttctttttctttttttcccctcttctccccaacctcgcaacaaaatcggcggctatcctcgtgtttcttcttcgctccgtggccgcagaatccccccaccgctgttcttgcggcgccggtgttcgtttgaaaggtgaggactcgatctgcttgccgtttctccttctgggcaggggcaggtaggcatggaatgcgatcttgggtggtccatggagggattgatggattgatagttacatggagtttattggtgtacttagattggtgggggatcaattatttcttgagttctggttgtgcacgaaacctctatttaaatcgaagttttcctattcatggtgatggggttgctcctacctaacaaatcgatactccttgctctgcttattctcgctttttatttaatgggcagcatgtatttcatgacgcatccgtcggcggcgacgaactaattttcagttctttatgttattcagcagttggctgcgctgtcctgggaggcctcagcagcagcagcagcgagctttgctcttgtgagcgcttcgtgtgcttgcagctgcgttttattattgcgtcttggagctgtcacgacgtggttgttgagaggaatctatcatcccttcacagttgcgaggaaagcttcctgtggtatgtgttgtgctttgttttcttgtgggcaactggcagattgcaatggcattattaggaccttgtccaccttgacttagacaaactgcgaattaggtggtgtgacatgtgttgatattttcttttccaatcctctgatgcttacaacccggttgtgcttgtgacgtgcccctacctttgtttgacttcaatgtgtagtataacatggttgtcctgggcaagctcattacgtattccccatgagctatttagttgattgggcgatgtggtagttgcatactagtcgtcctttcttcccttgtcacctttggcggcctcggcttgcttaaaaggatacatatgcttttgtaactagaacatttgttgttgaatttggattatttgatcccatggcgaattctcgggctagccgtttcaaggtatttctttatcttgccttggattcctcagttgtgatctttctttggttgtcatcagtttgatgtgttcttactcctttcttgaagtatttctgttcttgctgttcagttctgtgattttgtctgaaaactttatctttgtgcttatcatctgcctgctgtttaatttaatccttgaccttcttgagtcctttcaatgcttgtactgagttttttgttaatataccgtagaaaaacatatggaagcttagagatcaatgttgagcgagttatttttatgaatcatgcttttcttgtgtgtctgtaaagttgaaacagggacatcttttttgctaaatatagcttaaagagggatggtatgacatgtgactagagttccatgatttctttttctgtatcttctcagtgttgtaaactcatattagaatgaacatcatttgacgagcacactttgttctgtgtggtaaattagcatcttacatctcacatattgtggatcaggccatataacttatttattttttgcaatatgtatgaattgaaagtgcttttttttttcttcttgcatacttgattctagctaatctagagagtttgatcactcagtattggatatgtctacagctatatttagctggtgttcagagcactattatgttgatgtacattttagctttctgctaacaatttttgtactatttctagtccaaagtagagatctttttaataagccaagtctatataactgtgtgagtggagctaaaatgatgagtatggtgtagtatgaagctttgattgggatgtgaaaatccatgggtggaatcaggtgcatggggtctatcaagaaattagataattattgttagtaaacattttttaagtgttcctctgctttgtccagtaccatggtatattgtcacattgctattaactctaagagcaagataagggctaaagatcaaataggttccagcaatgccaaatatttcaccatgttacaaacaccaagatcgattaaagtttctaagtattttggtttgttccatttgttttttggcagcttcagtatggtttttgtgaggtaactttttattgaatttttttctttacattgccagatgtctaatctatcagagccctcaaaagaagctgcatcagctgatgattcaagtgctgtccagaaaactggagcatggagtaacacgttgaacattcttctgcaacaagcttcagtctatggtgtggctgctggttattgcctgtcagcatccctgctctccattatcaacaaatgggcagtcatgaaatttccataccctggagcattgacagctttacagtacttcactagtgttgttggagttctcttatgtggacaactaaagcttattgagcatgatggccttaatttgaggaccatgtggaagttcttgcctgctgcggtgatgttctacatctccatcttcacaaacagtgaacttctactccatgccaatgtggacactttcatcgtgtttcgctcagctgtgccaatttttgtggccattggagagaccctttatcttcaccaaccatggccatcactcaagacatggctttcactttcaactatacttggtggaagtgtgatctatgttttcacagacaaccagttcactgtgactgcttacacctgggcagtggcatatcttgcaagcatgtccattgactttgtctacatcaagcacgttgtcatgaccattggcctgaacacatggggccttgtgctttacaacaatctggaggctttgatgctcttccctcttgagatgcttctaatgggggagcttaatcagatgaagggcgacagcgctaaagtgacaaactggctttcatctgatgtcattcttcctgttgctctgtcttgcttgttcgggctatctatatccttcttcgggttctcctgcagacgggctatctcggcaactggatttaccgtgctcggtatagtgaacaagctcctgactgttgtgattaatctccttatctgggacaagcatgcctcctttgtgggaacaattgggctcttgatctgcatgtccggtggtgttctctaccagcaatccaccacaaaaccaaaggcccccaaggctgagccaaaagaggagaatgatgaggagcagcagaaattgctggagatgcagcaagggctcgaaagtagctcaactcagaagcaagcgtcatcttaagcctggtaggaaatttggcgtcgatatcttactctcaacctcaagacggcttccctgtatcatattatgggatgctaaagaagaatcatttggccaaaggatgtttgttcgtcatgctagaatcctgtaatgctgttggcatgaaaaatctcagagaaaacttaatgtcactttaaaattctttgtttagtggtataccgtaattcatttgttagacctgtggtagggtatcaattatcaaagaatcctgaaacatactcgaacagaatactccgtatacaatatgctgtttcattgataatacagggtggttacccttttccatgcagtatatttgtttttgcttttcgttttgtgatgaaggaaaattatcttttgtactcaaattgcctgtatattatgtattctgtattgtgttgaaggct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0215000, RefSeq:Os03g0215000