Os03g0216800
| Gene Name |
Os03g0216800 |
|---|---|
| Description |
Similar to Polygalacturonase B (Fragment) |
| Version |
NM_001055922.1 GI:115451572 GeneID:4332070 |
| Length |
3069 bp |
| Definition |
Oryza sativa Japonica Group Os03g0216800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:6179450..6182518 |
| Sequence Coding Region |
6179509..6179754,6179874..6180011,6180093..6180263,6180369..6180389,6180463..6180670 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:6179450..6182518 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:6179450..6182518 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggtcccaggaagcttcatctggcctccatttctgccctatcaatctttctctacgtgtttgctcacaccaattcagcacaagccttccccgtcgctgacggcacgtaccctcctgaagctgaaggcccagcagcagaaagttcagacatggacgagcagctggagctcacccctggaccgcagccgagggtcgtcgacgtcgacgactacagagcgagagccgacgccggcgaccacacggaggcgtttcttcaggcctggaaggaggcctgcaactcctccgattacccatccgtgctcctcgtgccggaggggaagacatacctcctgatgcctgtaagcttcaatggcccctgcagagccaccacgatcactgcaacgataagggggacgctggaggctccatcgaatcgatcggtttggctcgatcgcgatctgcaggaatggatcacgttcgacaacatcgatcacctccgtgtcctcggcggcgggacgctcaatggcaatggacaccaatggtggatcaactcttgcaagaccaacagatccatgagatgcgtcaccggcccaacggcgctgtacttcaggaggtgcaaccatctggtcgtggagggcctccagatcagggacagcatgcagatgcacgtcgtgatcgcctactcctggagagtgctggtctcgaggctgctcatcacggcgccaggatggagccccaacaccgacggcatccacgtatccaacagcagggaagtgttgatgagtggctgcatcatcagcacaggtgatgactgcatatcaattgtgaccggctctatgtttatacgggcaactgggatattttgtggaccaggccatggcataagcattggtagtctaggagcaaacaaatcatgggcccatgtttccgacgtgctggtggagaaagctacactggtgggcactaccaacggtgtgcggatcaaaacttggcagggaggagatggccatgcagaaaggattacctttcaagatataacaatgcacaacgtcactaacccggtgattatcgatcagaattactgtgactccatgacaccatgtcatgaacagggatcagctgtcgccataaataacatacgctacaggaacatacgtggaactagttcttcaaaagtcgccatcaacttcgtctgcagcaactctgtccattgtgatggcatagtgatgcaggatgtttctttggttggagaaggatcctacgtttcttgttcgtacatgaatgctagagtggtagagttggggtataacttcccgtattgcagagcggaaatgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MGPRKLHLASISALSIFLYVFAHTNSAQAFPVADGTYPPEAEGP AAESSDMDEQLELTPGPQPRVVDVDDYRARADAGDHTEAFLQAWKEACNSSDYPSVLL VPEGKTYLLMPVSFNGPCRATTITATIRGTLEAPSNRSVWLDRDLQEWITFDNIDHLR VLGGGTLNGNGHQWWINSCKTNRSMRCVTGPTALYFRRCNHLVVEGLQIRDSMQMHVV IAYSWRVLVSRLLITAPGWSPNTDGIHVSNSREVLMSGCIISTGDDCISIVTGSMFIR ATGIFCGPGHGISIGSLGANKSWAHVSDVLVEKATLVGTTNGVRIKTWQGGDGHAERI TFQDITMHNVTNPVIIDQNYCDSMTPCHEQGSAVAINNIRYRNIRGTSSSKVAINFVC SNSVHCDGIVMQDVSLVGEGSYVSCSYMNARVVELGYNFPYCRAEM</aaseq> |
| Gene Sequence |
<dnaseqindica>60..305#425..562#644..814#920..940#1014..1221#1331..1412#1632..1740#2568..2684#2771..2995#atcatcagtaaatcactgggttaatctctcctctcttaagttctagctactgctacaatatgggtcccaggaagcttcatctggcctccatttctgccctatcaatctttctctacgtgtttgctcacaccaattcagcacaagccttccccgtcgctgacggcacgtaccctcctgaagctgaaggcccagcagcagaaagttcagacatggacgagcagctggagctcacccctggaccgcagccgagggtcgtcgacgtcgacgactacagagcgagagccgacgccggcgaccacacggaggtgaacgagaccaccccaactgctctgctctctcgaattgcccgagatttctgccgcaatgctgccccgtgtggcaagaattctctgaacttccctgacgcagctgatgcgcgttacaggcgtttcttcaggcctggaaggaggcctgcaactcctccgattacccatccgtgctcctcgtgccggaggggaagacatacctcctgatgcctgtaagcttcaatggcccctgcagagccaccacgatcactgcaacggtgagtgctccgattgctgttcaactactcatcaggatgaatcctccattgctgttcagatcatgacgtttcagagttcagataagggggacgctggaggctccatcgaatcgatcggtttggctcgatcgcgatctgcaggaatggatcacgttcgacaacatcgatcacctccgtgtcctcggcggcgggacgctcaatggcaatggacaccaatggtggatcaactcttgcaagaccaacagatccatggtacttgcccactgtactcgcttacctctcatgaacatttcctcgacatgatcctggctcactcacaaaactccatttttttcttttctttcaaccacggatcagagatgcgtcaccggcccaacggtaccctgtttgatcagaaaatctttgcatacttgcattgcatgagcaatgtgtttcagctggcgaactgcaggcgctgtacttcaggaggtgcaaccatctggtcgtggagggcctccagatcagggacagcatgcagatgcacgtcgtgatcgcctactcctggagagtgctggtctcgaggctgctcatcacggcgccaggatggagccccaacaccgacggcatccacgtatccaacagcagggaagtgttgatgagtggctgcatcatcagcacaggtaccaatggctgtttatgtagattttcagaatgtatcacaaatgactttatttatctgcaaatgttgttcatcactctgttgtacttttgtgttgtgagttggcgtaggtgatgactgcatatcaattgtgaccggctctatgtttatacgggcaactgggatattttgtggaccaggccatggcataaggtacgttatctctagtaagactctgaacttgtatctttctctctatactcgcctatttccatacacaattgggatttgtggtgtataatggtccacgctgggattcagggctacacgtttcatacttgtcgtttccagtaataatcaatttattaaaaacatgcagtagactgtagatagggttttctgatgttttattggcattggtcgctgttgcagcattggtagtctaggagcaaacaaatcatgggcccatgtttccgacgtgctggtggagaaagctacactggtgggcactaccaacggtgtgcggatcaaaacttggcaggtaatgcacgtccaccttgctggattggcttggatggaaaattggagaaatattctgaatttgaaacagcattgttctcagagtcaccctcttgaaccttctgctcccagaaaagagcgatggcgttgatttccaaattcaacaacgccttgacagatgaatttaattataactacatccaagaacagctaagggcctgtttggtttccagggacttatttcaagttcctgtcacatcagatatttagacactaatttagagtattaaacatacactaattacaaaacccattccataactttggactaattcgcgagacgaatcttttgagtctaattacgccatgattttgacaatgtgatgctacagtaaacttttgataattatggattaattaggcttaaaaaattcgtctcgcggattagctctcatttataaaattagttttttactagtctatgtttaatactccaaattagcgtccaaacatccgatgtgacatgggctaaaaagttttagccccatctaaacaccccctaaatatataatgtagtactacgaaattatactagttataagcagtacttgtagttgtaatattgtagtatcttgctaatgcatttcgtacatataagaggtaatctaatatagataaatccactctccttatatagtgctatatactcctatatttctataggtcatatagaaaaggtagttccaaaagcgaaatgtggtattgttggaaaataagaaattttgtgcctaactgctgaaatgtttgttcctgcaatttatgcttcccctcttatcatccttttgacagggaggagatggccatgcagaaaggattacctttcaagatataacaatgcacaacgtcactaacccggtgattatcgatcagaattactgtgactccatgacaccatgtcatgaacaggtactatcctacaataactccgtctcttcttctagagaccgatcagccaagccccagttaacagtgtttggtaaaacattttgcagggatcagctgtcgccataaataacatacgctacaggaacatacgtggaactagttcttcaaaagtcgccatcaacttcgtctgcagcaactctgtccattgtgatggcatagtgatgcaggatgtttctttggttggagaaggatcctacgtttcttgttcgtacatgaatgctagagtggtagagttggggtataacttcccgtattgcagagcggaaatgtagtgtatctgtagtactgcagagcggaaatattattcattctttcgataaataatactccctccattctaaaatat</dnaseqindica> |
| External Link(s) |
