Os03g0218500

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0218500| Description = Similar to 70kD heat shock protein| Version = NM_001055932.1 GI:115451592 GeneID:4332080| Length = 3233 bp| Definit...")
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Gene Name

Os03g0218500

Description

Similar to 70kD heat shock protein

Version

NM_001055932.1 GI:115451592 GeneID:4332080

Length

3233 bp

Definition

Oryza sativa Japonica Group Os03g0218500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6271421..6274653

Sequence Coding Region

6271665..6273401

Expression

GEO Profiles:Os03g0218500

Genome Context

<gbrowseImage1> name=NC_008396:6271421..6274653 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6271421..6274653 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactgaacaattatacactgtggcatctgacagtgaaaccactggggaagataagtcgcagatgtcgtttcctgatgttgctattggaatcgacattgggacctcaaattgtagtgttgccgtttggactggccatcaggttgaactcctcaaaaacactcgcaaccagaaagggatgaggtcatatgtgatgttcaaagatgacagcctttcagcaggagttacaggaggagcaacccgggaacatggacatgaggaaagagatattttgtcaggaagtgccatatttaacatgaaacgtttgattgggagaatggacacagatgaagtggttcaagctagcaagagccttccttttcttgtgcagacattgggtattggggtgagaccattcattgcagcactggtgaacaatatgtggcggtctaccactcctgaagaagttcttgccatctttctccttgaattgaaggccttggtagagatgcatctcaaacatccggtgaggaatgctgttcttaccattccagttgcattcagtcggtttcaacagaccaggattgagagagcatgtgcgatggctgggctgcatgtgttacggctcatgccagagccgaccgctatcgcacttttgtatgcccaacagcagcagcaattgctacatgacaatatgggaagtggcattgagaaaattgctctgatatttaacatgggtgctggctactgtgatgctgctgtggctgccactgctggaggtgtttctcagataagagcactttcaggaagcactgttggtggagaggatatccttcagaatgtcatgcgccatctcatgcctgattttgatagtctatatgctggtcaaacaatggacagaatcaagtcaattggcttactccggatggcaactcaggatgcaattcacaaactggctacgcaggagcatgtggagatcaatgtagatttgggggctggccacaaagtgtcaaagatcttggaccgtggagaatttgaaaaggtgaatcagtctatttttgagaaatgtgaagggatcatcaagcaatgcctggctgatgcaaagttaacaccagaggacatcaatgatgtgatattggttggaggatgttccagaattcctaaaatcagaagcgttgtccttggcttatgcaagaaggacgactcttacagtggtatagacccacttgaagctgcagtttcaggggctgctttggaaggagccattgcctcaggagtatctgacccttcagggagcctggatctgttgacaattcaggcaactccaatgaaccttggaattcgtgctgacggcggtaacttcgccgcaatcattccaaggaacactgctgttcctgcgagaagggacatgctctttaccacaacccacgacaatcagaccgaagctctcattgccgtctatgaaggcgaagggaatcaggctgaagacaaccatctattgggatacttcaagatcaccggtattccagcagcagcaaagggcaccgtcgaaatcaatgtctgcatggacatcgacgctggcaatgtcctcagggtattcgccggcgtcgtcaagcctcagggccaggctgttccaccgttcattgaggtgaggatgccaacgctagacgatggccatggctggtgcggacaggctctcgccaagatgtatggcagtacgcttgacctggctactatcccgaagaagctgcatccttga</cdnaseq>

Protein Sequence

<aaseq>MTEQLYTVASDSETTGEDKSQMSFPDVAIGIDIGTSNCSVAVWT GHQVELLKNTRNQKGMRSYVMFKDDSLSAGVTGGATREHGHEERDILSGSAIFNMKRL IGRMDTDEVVQASKSLPFLVQTLGIGVRPFIAALVNNMWRSTTPEEVLAIFLLELKAL VEMHLKHPVRNAVLTIPVAFSRFQQTRIERACAMAGLHVLRLMPEPTAIALLYAQQQQ QLLHDNMGSGIEKIALIFNMGAGYCDAAVAATAGGVSQIRALSGSTVGGEDILQNVMR HLMPDFDSLYAGQTMDRIKSIGLLRMATQDAIHKLATQEHVEINVDLGAGHKVSKILD RGEFEKVNQSIFEKCEGIIKQCLADAKLTPEDINDVILVGGCSRIPKIRSVVLGLCKK DDSYSGIDPLEAAVSGAALEGAIASGVSDPSGSLDLLTIQATPMNLGIRADGGNFAAI IPRNTAVPARRDMLFTTTHDNQTEALIAVYEGEGNQAEDNHLLGYFKITGIPAAAKGT VEINVCMDIDAGNVLRVFAGVVKPQGQAVPPFIEVRMPTLDDGHGWCGQALAKMYGST LDLATIPKKLHP</aaseq>

Gene Sequence

<dnaseqindica>1253..2989#gcttcgggagcccggctccgcactgtcggcgtgcgcgccgcgtgccgcctcccgtcctctccggaaaactccggcgcggctttctttcttcctccgccttcttcaaggctccagtccagctgctcgctcccaccacccttcgcctccccaagcttcgtcttcgcccgcactccctcccagcaaccgccgccccggagagtcccggatttcgtggccatctccgtcgcacgatcgagtggcgaggtatctccgcacaccctgcgcttgccttgttttctttacctgcttcggtttgttccccgtcgtagtgctgtaactgtaagcccggatctgtgaacctgttgtggtcgctgaatactttctcttgatggaagcctaatgcgatgcgatgcgattgtctgctagctagtagctaggtgttactactggaaaatcccgacatttaatcctatcccgttgatgttggatgtgttgttgtcagtgctagaggttggagaaattcctgaaccccggcaaggcatgaaattggcataatcagtggaatcgaagtacgtgacctactaagtcctaagtttgtcttgtcgcagagaactcaactcattacttggttcattggtttttagcaatcttattccttggtcgatccaggatagtgtcatctagttacatgagttgagaccactatatacaactgtactgcaagacaagttacttgtttcaaatacgcgaattggttatctataattcaagctgccttcgcgggtgcatcaagtgagtccgatatgcatggatgaggacagagccagaaaaaaaaaaggaatttctttttatctgtatgtgaaatgtacaagtactgtcaggactcctgaaaaaagaaaaggaaatactgttaggattcagaaaatatcacttgaatggattgcttattttgaaatagtttcatgggtagctcctttaaatggctcgaataggtcatttctgagtcatggacatgtttggtttgctaggatttcacaccgtttcatcgagtgtcattggaattctgttttcttgcttgtttttttgccttatgtattggcttacacttttatgttacattttgcaaatgcaataaaatagtactatcataaacccttggccttaaaactactaattcaaatggcgggcatagtttggattaaccagatctttttccctttttagaacaagaagaatgttaggtacacaatactgacgctgcattgtttgcaggatgactgaacaattatacactgtggcatctgacagtgaaaccactggggaagataagtcgcagatgtcgtttcctgatgttgctattggaatcgacattgggacctcaaattgtagtgttgccgtttggactggccatcaggttgaactcctcaaaaacactcgcaaccagaaagggatgaggtcatatgtgatgttcaaagatgacagcctttcagcaggagttacaggaggagcaacccgggaacatggacatgaggaaagagatattttgtcaggaagtgccatatttaacatgaaacgtttgattgggagaatggacacagatgaagtggttcaagctagcaagagccttccttttcttgtgcagacattgggtattggggtgagaccattcattgcagcactggtgaacaatatgtggcggtctaccactcctgaagaagttcttgccatctttctccttgaattgaaggccttggtagagatgcatctcaaacatccggtgaggaatgctgttcttaccattccagttgcattcagtcggtttcaacagaccaggattgagagagcatgtgcgatggctgggctgcatgtgttacggctcatgccagagccgaccgctatcgcacttttgtatgcccaacagcagcagcaattgctacatgacaatatgggaagtggcattgagaaaattgctctgatatttaacatgggtgctggctactgtgatgctgctgtggctgccactgctggaggtgtttctcagataagagcactttcaggaagcactgttggtggagaggatatccttcagaatgtcatgcgccatctcatgcctgattttgatagtctatatgctggtcaaacaatggacagaatcaagtcaattggcttactccggatggcaactcaggatgcaattcacaaactggctacgcaggagcatgtggagatcaatgtagatttgggggctggccacaaagtgtcaaagatcttggaccgtggagaatttgaaaaggtgaatcagtctatttttgagaaatgtgaagggatcatcaagcaatgcctggctgatgcaaagttaacaccagaggacatcaatgatgtgatattggttggaggatgttccagaattcctaaaatcagaagcgttgtccttggcttatgcaagaaggacgactcttacagtggtatagacccacttgaagctgcagtttcaggggctgctttggaaggagccattgcctcaggagtatctgacccttcagggagcctggatctgttgacaattcaggcaactccaatgaaccttggaattcgtgctgacggcggtaacttcgccgcaatcattccaaggaacactgctgttcctgcgagaagggacatgctctttaccacaacccacgacaatcagaccgaagctctcattgccgtctatgaaggcgaagggaatcaggctgaagacaaccatctattgggatacttcaagatcaccggtattccagcagcagcaaagggcaccgtcgaaatcaatgtctgcatggacatcgacgctggcaatgtcctcagggtattcgccggcgtcgtcaagcctcagggccaggctgttccaccgttcattgaggtgaggatgccaacgctagacgatggccatggctggtgcggacaggctctcgccaagatgtatggcagtacgcttgacctggctactatcccgaagaagctgcatccttgagaaattgcatatcgtcgcatgtagttgtatgactccattatctaaaaaaaatgtagttgtatgactcgtatcatccggtgccgtagttcgtgcatatgtggttcgaccgtgtcatgatggttacttggttcagtagcttgtttgccggactttttacatgtaaacataaagagtgccaatgtcatctctgtacaaaaaatgtgtgtcgcgtgtatagaataaatcaatgttaccggctgttcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0218500, RefSeq:Os03g0218500