Os03g0219400

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0219400| Description = Glycoside hydrolase, family 20 protein| Version = NM_001055936.1 GI:115451600 GeneID:4332084| Length = 2431 bp| Def...")
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Gene Name

Os03g0219400

Description

Glycoside hydrolase, family 20 protein

Version

NM_001055936.1 GI:115451600 GeneID:4332084

Length

2431 bp

Definition

Oryza sativa Japonica Group Os03g0219400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6307610..6310040

Sequence Coding Region

6308068..6309032,6309138..6309990

Expression

GEO Profiles:Os03g0219400

Genome Context

<gbrowseImage1> name=NC_008396:6307610..6310040 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6307610..6310040 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcattgccggcctatctcctcctcctcctcctcatcctggtgatcctccgaccagcggctgcgcccggcgccgcttcgcagccgcctacctcggagcctcacctcccgccgccgctgcttgctcagaaggtgcaggtgtggcccaagccgacgtccatctcgtggccgtccgcggtgtacgcgccgctctcgccgtcgttcagcgtccgcgcggtgctgtcccacccgtcgctccgccaggcggtagccttctacacccgcctcatccgcgccgagcgccacgcgccgctggttccccccgccaactacaccctctcccgcgtccccgtccgcaccctcacgctctccgtctccgaccccgacgtcccgctcggccccgccgtcgacgagtcctacacgctctccgtgctcccggactccggatcggccgatatctccgccgccacgccatggggcgccatccgcgggctcgagaccttctcccagctcgcctgggccggcggcggcgccgcctccggtggccagccgatcgtccccagcggcatcgagatctccgaccgcccacacttcacccaccgcggcatcctcctcgacaccgccaggaatttctacccggtccgcgacatcctccacaccctccgcgccatggccttcaacaagctcaatgtcttccactggcacatcaccgacgcccagtccttccccatcgtcctccctaccgtccccaacctcgccaactccggctcctactcccccaccatgcgctacaccgagaacgacgtccggcacatcgtcagcttcgccgcctccttcggcatccgcgtcatccccgagatcgacatgcccgggcacacgggttcgtgggcgggagcgtacccggagatcgtcacctgcgcgaacaggttctgggcgccgcacgcggagccggcgctggcggcggagcccggcacggggcagctgaacccgctcaaccccaagacgtaccgcgtggcgcaggacgtgctgcgcgacatggtggccctgttcccggacccgtacctccacggcggcgccgacgaggtgaacacggcgtgctgggaggacgacccggtggtgcgccggttcctcgccgagggcggcacgcacgaccacctcctggagctgttcatcaacgcgacgcgcccgttcgtggcgcaggagctgaaccgcacggtggtctactgggaggacgtcctcctcgggcccaaggtcaccgtcggccccacgattctgcccagggagaccaccatactgcagacgtggaacgacgggccggagaacacgaagcgcgtcgtcgccgcgggctaccgcgccatcgtgtcgtcggcgtcgtactactacctggactgcggccacggcgggtgggtgggcaacgacagccggtacgacaagcaggagaaggagcgcgagggcacgccgctgttcaacgaccccggcggcacgggcgggtcatggtgcgcgccgttcaagacgtggcagcgcgtctacgactacgacatcctgcacgggctgaccgacgacgaggcgcagctggtgctgggcggggaggtggcgctgtggtcggagcagtcggacgagacggtgctggacgccaggctgtggccgagggccgccgccgccgcggagacgctctggtccggcaacaagggctccaacgggaagaagcgctacgcgaacgccaccgaccgcctcaacgactggaggcaccggatggtcgagcgcggcatccgcgccgagcccatccagccgctctggtgctcgctccaccccggcatgtgcaacctgtcgcagtag</cdnaseq>

Protein Sequence

<aaseq>MAALPAYLLLLLLILVILRPAAAPGAASQPPTSEPHLPPPLLAQ KVQVWPKPTSISWPSAVYAPLSPSFSVRAVLSHPSLRQAVAFYTRLIRAERHAPLVPP ANYTLSRVPVRTLTLSVSDPDVPLGPAVDESYTLSVLPDSGSADISAATPWGAIRGLE TFSQLAWAGGGAASGGQPIVPSGIEISDRPHFTHRGILLDTARNFYPVRDILHTLRAM AFNKLNVFHWHITDAQSFPIVLPTVPNLANSGSYSPTMRYTENDVRHIVSFAASFGIR VIPEIDMPGHTGSWAGAYPEIVTCANRFWAPHAEPALAAEPGTGQLNPLNPKTYRVAQ DVLRDMVALFPDPYLHGGADEVNTACWEDDPVVRRFLAEGGTHDHLLELFINATRPFV AQELNRTVVYWEDVLLGPKVTVGPTILPRETTILQTWNDGPENTKRVVAAGYRAIVSS ASYYYLDCGHGGWVGNDSRYDKQEKEREGTPLFNDPGGTGGSWCAPFKTWQRVYDYDI LHGLTDDEAQLVLGGEVALWSEQSDETVLDARLWPRAAAAAETLWSGNKGSNGKKRYA NATDRLNDWRHRMVERGIRAEPIQPLWCSLHPGMCNLSQ</aaseq>

Gene Sequence

<dnaseqindica>1009..1973#51..903#actgctgcactcgcggaggcgaccaggattgctcgtcgtcctccacggagatggcggcattgccggcctatctcctcctcctcctcctcatcctggtgatcctccgaccagcggctgcgcccggcgccgcttcgcagccgcctacctcggagcctcacctcccgccgccgctgcttgctcagaaggtgcaggtgtggcccaagccgacgtccatctcgtggccgtccgcggtgtacgcgccgctctcgccgtcgttcagcgtccgcgcggtgctgtcccacccgtcgctccgccaggcggtagccttctacacccgcctcatccgcgccgagcgccacgcgccgctggttccccccgccaactacaccctctcccgcgtccccgtccgcaccctcacgctctccgtctccgaccccgacgtcccgctcggccccgccgtcgacgagtcctacacgctctccgtgctcccggactccggatcggccgatatctccgccgccacgccatggggcgccatccgcgggctcgagaccttctcccagctcgcctgggccggcggcggcgccgcctccggtggccagccgatcgtccccagcggcatcgagatctccgaccgcccacacttcacccaccgcggcatcctcctcgacaccgccaggaatttctacccggtccgcgacatcctccacaccctccgcgccatggccttcaacaagctcaatgtcttccactggcacatcaccgacgcccagtccttccccatcgtcctccctaccgtccccaacctcgccaactccggctcctactcccccaccatgcgctacaccgagaacgacgtccggcacatcgtcagcttcgccgcctccttcggcatccgcgtcatccccgagatcgacatgcccggtgagtgagaaatcccagactccctctgctgctcctgcatttcaattccattgctctccgaataaacagtatactcaaggctaagtgtcgcgcgcttcggatcagggcacacgggttcgtgggcgggagcgtacccggagatcgtcacctgcgcgaacaggttctgggcgccgcacgcggagccggcgctggcggcggagcccggcacggggcagctgaacccgctcaaccccaagacgtaccgcgtggcgcaggacgtgctgcgcgacatggtggccctgttcccggacccgtacctccacggcggcgccgacgaggtgaacacggcgtgctgggaggacgacccggtggtgcgccggttcctcgccgagggcggcacgcacgaccacctcctggagctgttcatcaacgcgacgcgcccgttcgtggcgcaggagctgaaccgcacggtggtctactgggaggacgtcctcctcgggcccaaggtcaccgtcggccccacgattctgcccagggagaccaccatactgcagacgtggaacgacgggccggagaacacgaagcgcgtcgtcgccgcgggctaccgcgccatcgtgtcgtcggcgtcgtactactacctggactgcggccacggcgggtgggtgggcaacgacagccggtacgacaagcaggagaaggagcgcgagggcacgccgctgttcaacgaccccggcggcacgggcgggtcatggtgcgcgccgttcaagacgtggcagcgcgtctacgactacgacatcctgcacgggctgaccgacgacgaggcgcagctggtgctgggcggggaggtggcgctgtggtcggagcagtcggacgagacggtgctggacgccaggctgtggccgagggccgccgccgccgcggagacgctctggtccggcaacaagggctccaacgggaagaagcgctacgcgaacgccaccgaccgcctcaacgactggaggcaccggatggtcgagcgcggcatccgcgccgagcccatccagccgctctggtgctcgctccaccccggcatgtgcaacctgtcgcagtagcagtgtcagtttgctccatcgcttcgcctcgctgtcgcctgcacagtgcgaaggaatgttcagaaatccaagtgacagaagaagaatccgcatcgatcttgggggcgtgacgtcgtacactgattgctgaagaaaccaagaacagaataaacgaatgcctactaaacaaatgttctgttctgatgccctcttccggagggaacccgccgattgcgaattgttcaagaaagtcgcggacttatgccgtgcagaaaagaaagttttctttgtgagtagtttctgcacttgatgctgaacagatttttgcactgtttattccttcattttcacaataacacgggtagatagagtagtagtagtatttggctagtgcaatagatgaacaaggttgtagtagaagtgcagaaccatctggttgtagttttgtacgaagggtatcttaatagaaaaaagttggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0219400, RefSeq:Os03g0219400