Os03g0225500
| Gene Name |
Os03g0225500 |
|---|---|
| Description |
Nup133 nucleoporin family protein |
| Version |
NM_001055968.1 GI:115451664 GeneID:4332118 |
| Length |
7372 bp |
| Definition |
Oryza sativa Japonica Group Os03g0225500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:6600575..6607946 |
| Sequence Coding Region |
6600677..6600852,6601057..6601181,6601282..6603057,6603642..6604357,6605391..6605549 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:6600575..6607946 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:6600575..6607946 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttctccccggcgatcaagaagccccacctgctccaccgcagggacaaggaggaggcgtccccctcaccccctcccgctcccgcgcacacgcccgcgcctcgtggatttgccgtccacgaccgccccgccaccggcaccccggcgccgtggacctcctcctccctgctcgccaggatttcaacatcaacacgaacagacaggacaggggattctggccagatccaaccggtgcatgtatccgaatttccccaaatagttcgaaatgctcaagccaaccttctgcaaaagagtttttccggcaagaacatgcttgctggtggcattgataaagaaacatcccttgcatggatgttatgtggaaatgagctttttatctggagttacctggcttctgttgcaaaagactgtcttgtacttgaggtcccttcttctcttatggggaacaaagaagaaaaatctctatgtggtaatcagtgggcagtttgcatagtgagatggggtagtagtggtgcatcaacacggagcagtggagatatattgcatcgaagaagttcgactggttttatcctgtgcaacaaaagaacacaagctatagcttattggtctgatatctatgctgaaagcagtaagagttcagttcttgatttaattggatatggtgatacatcttcaggtgatggcacatctggaaactgcaggattaattctcttattgcagtggcagttccaggaggtattaatgaatgcattgtgattgcttctcagccaacaggcacattatggatgttctggtgttcaccagctgcagttcgtcgaagagaaattcataagggtacattaggagtttataatgctgatcattctcagaaaaatagtggtggaaggtccttggcttggctaccaagtaaagcatcatctaaggctgctgaacggacgttctttttattgactagtcatgagctgcaatgctggagcatctcattcgggcatgatatcaactgcaaaaaaatagggtctcaggaaattgttggtagtgatggtgatatgggaataaagaaagacatagctggacagaaaaacatatggcttttggacatgcagatagatgatcatgggaaagaaattatcattcttgttgctaccttctgcaaagatcgggtgagtgggtcgaactacactcagtattctcttctgacgatgctgtacagacctaaccaaaagttttcatctgaagataatgtgattaaaactgaaaggtttttggagaaaaaagctccttctcaggtgataatccctaaggctagagtagaggatgaagagttcttgttttctatgaggctaaaaactggtggtaagccttctggttctgtaatcatactgtcaggtgatggaacagcaacaatagccatatactggagaggttcaacccgtctctatcaatttgatctgccttgggatgctggaaaggttctcgatgcttcagttatcccatcttccgaggacagagatgaaggagcttgggttgttcttacagaaaaggcaggagtgtgggcaattcctgagaaagctgtgttagttggtggggttgagccaccagagcggagcttgtcaagaaaaggaagttgcaatgaagcagttgctgaagagaaaagaagaaatcaggcattcaatgctagtgttgtacccagaagagctagttctgaggcttggagtgctggagagaggcaaagaccagcattaactggtatagctcagcaggctgtggttgatgaggagtctgaaatgttattaaaccggttatttcatgattttgttttgtccggtacagttcatgaagcacttcaaaagcttagagcagcaggcgcatttgacaaagagggtgagatgaacatatttgttcgaataagcaaatccatcgtaaacactctatctaagcattggacaacaactagagaagctgaatttcttgcttcaacaattgtttcatccctaactgagaagcagcaaaaacacaagaaattccttcagtttcttgtcttgtctaagtgccatgaggaactctcttcaaagcaaagaactgcgatgctaactgtcatggagcatggagaaaagctctctggaatgatccagctcagagaattacaaaatgctcttagccatcaacgctcaagcatacatttatcacctcagtcaaaaaaccaaacaactggtgcattgtggaaccttattcaattggttggtgagcaatctcgaagaaacactgttctcttaatggaccgtgataatgctgaagtgttctacagcagagtttcagatatagaagatctatttaattgcatatctcatcagcttcaatacattataaccggagaagaaaacccttctgttcagatgcaacgtgcacttgagttatcaaatgcttgcatgaccctagttcaggcagcattgcgctacagagaggagcacaaggactggtatccttctcctgaaggactgataacatggaacagccagcctgttgtacgatctggaatctggcgagtagcatcctttgccatggagcttttgagagaaccaggggctgcggacatgtcaatgaagtcaaacctatggtctcagttggaacgactcacagatatcctactggatgcatatattgggttgttaactgctaaattcgagcgtggggatgagcatggtgtgctaatccaagaatactgtgacagaagagatgaacttcttgggtccctctatgacctcgcaaaacaaattgtagatgcaaaatatcaggagacgacagaagtcactgacaatctggaactgaaagaatctatattcagagaagtcacttctccaattttggcaacagctaaacggcatgaagggtaccaaacattgtggcagatttgctatgatctcagtgatacaggccttcttcgcagtcttatgcatgatagtgtaggacctcacgggggattcagtttctttgttttcaaacaactagtcaacaggcgtcaacatgctaagctattaagattaggtgaagaattcccggaagagctagccaattttctgaaagagcgggatgatcttctgtggcttcatgagatatgcttaaatcggttctcttctgcttcgaagactcttcatactctcgtgagtcctgaggaagatgctaaccttacaagcaacaggaaatcactgtcctttgttgaaagaagacgctttctctatctctccaaaattgcagcagcagcaggtaaggatgttgattatgaagtgaaggttgcccatatagatgcagatatccgaattctaaatctgcaggaagagattgttcagcatgacccagagtatgcaccagataaatatactaccaagccatttcgtccattggaactgatcgagatgtgcctgaagggagatcgagagctctctcttaaagcttttgaagtatttgcttggacgagggcctcgttccggagctccaacaaaggccttctagaggcttgctggatgaatgcagccgaccaggacgactgggttagccttcaagaggaatcttcaggaggttggagcgatgaagtcatccaagaatctcttcagggcactgtcctgttcaatgcctccaggctgtgttatagcccagacgccgtggtgtatgacggttcgtttgaggacgtgctgcctgtgaagaaagaagacgtgcatctgagaggcttggagggcagatgtctctcagtggaggaagtgctgatgcagcacaaggatttccctgatgcgggtaaattgatgatgaccgcggtgataatgggcaaggagctaccttatactgtttccacagctgaacctgttgacatggactcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MFSPAIKKPHLLHRRDKEEASPSPPPAPAHTPAPRGFAVHDRPA TGTPAPWTSSSLLARISTSTRTDRTGDSGQIQPVHVSEFPQIVRNAQANLLQKSFSGK NMLAGGIDKETSLAWMLCGNELFIWSYLASVAKDCLVLEVPSSLMGNKEEKSLCGNQW AVCIVRWGSSGASTRSSGDILHRRSSTGFILCNKRTQAIAYWSDIYAESSKSSVLDLI GYGDTSSGDGTSGNCRINSLIAVAVPGGINECIVIASQPTGTLWMFWCSPAAVRRREI HKGTLGVYNADHSQKNSGGRSLAWLPSKASSKAAERTFFLLTSHELQCWSISFGHDIN CKKIGSQEIVGSDGDMGIKKDIAGQKNIWLLDMQIDDHGKEIIILVATFCKDRVSGSN YTQYSLLTMLYRPNQKFSSEDNVIKTERFLEKKAPSQVIIPKARVEDEEFLFSMRLKT GGKPSGSVIILSGDGTATIAIYWRGSTRLYQFDLPWDAGKVLDASVIPSSEDRDEGAW VVLTEKAGVWAIPEKAVLVGGVEPPERSLSRKGSCNEAVAEEKRRNQAFNASVVPRRA SSEAWSAGERQRPALTGIAQQAVVDEESEMLLNRLFHDFVLSGTVHEALQKLRAAGAF DKEGEMNIFVRISKSIVNTLSKHWTTTREAEFLASTIVSSLTEKQQKHKKFLQFLVLS KCHEELSSKQRTAMLTVMEHGEKLSGMIQLRELQNALSHQRSSIHLSPQSKNQTTGAL WNLIQLVGEQSRRNTVLLMDRDNAEVFYSRVSDIEDLFNCISHQLQYIITGEENPSVQ MQRALELSNACMTLVQAALRYREEHKDWYPSPEGLITWNSQPVVRSGIWRVASFAMEL LREPGAADMSMKSNLWSQLERLTDILLDAYIGLLTAKFERGDEHGVLIQEYCDRRDEL LGSLYDLAKQIVDAKYQETTEVTDNLELKESIFREVTSPILATAKRHEGYQTLWQICY DLSDTGLLRSLMHDSVGPHGGFSFFVFKQLVNRRQHAKLLRLGEEFPEELANFLKERD DLLWLHEICLNRFSSASKTLHTLVSPEEDANLTSNRKSLSFVERRRFLYLSKIAAAAG KDVDYEVKVAHIDADIRILNLQEEIVQHDPEYAPDKYTTKPFRPLELIEMCLKGDREL SLKAFEVFAWTRASFRSSNKGLLEACWMNAADQDDWVSLQEESSGGWSDEVIQESLQG TVLFNASRLCYSPDAVVYDGSFEDVLPVKKEDVHLRGLEGRCLSVEEVLMQHKDFPDA GKLMMTAVIMGKELPYTVSTAEPVDMDS</aaseq> |
| Gene Sequence |
<dnaseqindica>103..278#483..607#708..2483#3068..3783#4817..4975#5145..5454#6062..6129#6622..7164#gagcgccgacgccgagacgccgagagcccaaggccggctagtcggagagtgcggccgcgtgcgggtggctgctgcgctgcgcgaactcccccgccgccaaagatgttctccccggcgatcaagaagccccacctgctccaccgcagggacaaggaggaggcgtccccctcaccccctcccgctcccgcgcacacgcccgcgcctcgtggatttgccgtccacgaccgccccgccaccggcaccccggcgccgtggacctcctcctccctgctcgccaggttccgtttattccccatttttctttgattttatcagaatcaccgcatttcatcgtattttcgtccccagttgaggcgccggaagcgagcgattcaaatgagctcgtttgccctttttgcagtagtctagtgcgttaactacaggtcattgtgctgcgatagttttataaactttttattttgaaactttttgcaaactagcaggatttcaacatcaacacgaacagacaggacaggggattctggccagatccaaccggtgcatgtatccgaatttccccaaatagttcgaaatgctcaagccaaccttctgcaaaagagtttttccggtaactattcctgtttgatggtcctgtgctagtttttcctggttattagtttgcttgtaccatactgaacagtagatgcttgttaaatacatccttgtaggcaagaacatgcttgctggtggcattgataaagaaacatcccttgcatggatgttatgtggaaatgagctttttatctggagttacctggcttctgttgcaaaagactgtcttgtacttgaggtcccttcttctcttatggggaacaaagaagaaaaatctctatgtggtaatcagtgggcagtttgcatagtgagatggggtagtagtggtgcatcaacacggagcagtggagatatattgcatcgaagaagttcgactggttttatcctgtgcaacaaaagaacacaagctatagcttattggtctgatatctatgctgaaagcagtaagagttcagttcttgatttaattggatatggtgatacatcttcaggtgatggcacatctggaaactgcaggattaattctcttattgcagtggcagttccaggaggtattaatgaatgcattgtgattgcttctcagccaacaggcacattatggatgttctggtgttcaccagctgcagttcgtcgaagagaaattcataagggtacattaggagtttataatgctgatcattctcagaaaaatagtggtggaaggtccttggcttggctaccaagtaaagcatcatctaaggctgctgaacggacgttctttttattgactagtcatgagctgcaatgctggagcatctcattcgggcatgatatcaactgcaaaaaaatagggtctcaggaaattgttggtagtgatggtgatatgggaataaagaaagacatagctggacagaaaaacatatggcttttggacatgcagatagatgatcatgggaaagaaattatcattcttgttgctaccttctgcaaagatcgggtgagtgggtcgaactacactcagtattctcttctgacgatgctgtacagacctaaccaaaagttttcatctgaagataatgtgattaaaactgaaaggtttttggagaaaaaagctccttctcaggtgataatccctaaggctagagtagaggatgaagagttcttgttttctatgaggctaaaaactggtggtaagccttctggttctgtaatcatactgtcaggtgatggaacagcaacaatagccatatactggagaggttcaacccgtctctatcaatttgatctgccttgggatgctggaaaggttctcgatgcttcagttatcccatcttccgaggacagagatgaaggagcttgggttgttcttacagaaaaggcaggagtgtgggcaattcctgagaaagctgtgttagttggtggggttgagccaccagagcggagcttgtcaagaaaaggaagttgcaatgaagcagttgctgaagagaaaagaagaaatcaggcattcaatgctagtgttgtacccagaagagctagttctgaggcttggagtgctggagagaggcaaagaccagcattaactggtatagctcagcaggctgtggttgatgaggagtctgaaatgttattaaaccggttatttcatgattttgttttgtccggtacagttcatgaagcacttcaaaagcttagagcagcaggcgcatttgacaaagagggtgagatgaacatatttgttcgaataagcaaatccatcgtaaacactctatctaagcattggacaacaactagagaagctgaatttcttgcttcaacaattgtttcatccctaactgagaagcagcaaaaacacaagaaattccttcagtttcttgtcttgtctaagtgccatgaggaactctcttcaaagcaaagtatggattttcttttgtgtcattatttatattcattgatttattattttaggcatatatcatcctagctatgatattaatcgaacacattggttctttgttattcaaaatagcataatgaatgctgatgacaattttgatggtattaaaactataggagctgtctggtaaaaaagaagaagaaaatctagatatgctgctgtaaatcatgaaaaatacaaacttcttagctgattttaaagccgtatacagttgtagaactcttcttaccttcatttctgtatacatgattgttgaaactggtgactgagcatgtaactctattggaatctttacctagcgttatatagggatgctaattttggcatgcctgatgggacacggacatatattatgcactcttagaacagcttgcacctttatttctgctaaaagatggtactgttactaacagtacagtatgagctgtaatattgacaaataaccatacaggttagccacaatttttttcaaaaaataactgccagtgcatcattttgcgtgacaacttctgttggaaaagaagtaatttgattgtcttgtaggaactgcgatgctaactgtcatggagcatggagaaaagctctctggaatgatccagctcagagaattacaaaatgctcttagccatcaacgctcaagcatacatttatcacctcagtcaaaaaaccaaacaactggtgcattgtggaaccttattcaattggttggtgagcaatctcgaagaaacactgttctcttaatggaccgtgataatgctgaagtgttctacagcagagtttcagatatagaagatctatttaattgcatatctcatcagcttcaatacattataaccggagaagaaaacccttctgttcagatgcaacgtgcacttgagttatcaaatgcttgcatgaccctagttcaggcagcattgcgctacagagaggagcacaaggactggtatccttctcctgaaggactgataacatggaacagccagcctgttgtacgatctggaatctggcgagtagcatcctttgccatggagcttttgagagaaccaggggctgcggacatgtcaatgaagtcaaacctatggtctcagttggaacgactcacagatatcctactggatgcatatattgggttgttaactgctaaattcgagcgtggggatgagcatggtgtgctaatccaagaatactgtgacagaagagatgaacttcttgggtccctctatgacctcgcaaaacaaattgtagatgcaaaatatcaggtttggtttaaattaaaatcattgtttgctcaatacttttccttactacagtaaggcgctttaccttttgcaatttcacattgtccagctttttacccgttctgtcatatcaatgtagtatcattcattatattgcccatcattccttgagattttgtggttacatagtaaggcatagtttatttcagcaatcatgtgctgttctacccaaattagtggattgctttatgtcagacacatatgcaattatgtatgcaacagtaaccaaggaacccttttttgtcattattttggtagtcacccattcagtaccgaatctgtgttctccaattccatcctctctctctctctctctctttttctttcttttttttttcatttgttgcttggttggttctctttggttgcttccttatagtgacttagttcactgtatggggtatttactacagtctatatggttattgactttagttattctccgatcttagcacaaatattattgggcagctgccataaatgtatgttcgtggcattttagcatttacatacttgaaacaatactgatgttctagctttggttggatggtgtttagccggagttgtggcttagagtgcctgttttatgctgtaaagtaatgttcatcgttgtaacaatagcggttgtacagctcttagcctccatggtagctgtatttgttgttctagtttgaacctcttctcaatcttaataaacttcggccgcgtatcttacgctggcccggcgaaaagtttctgtaagggtgatctcaaaattcaaattataaggtaacattaaaaagttatttttggatgactggcaattttttaattaaggaggcatattttctggattgtccactggtcaagtattctactgttttcagttcttgacatcatatttacatgaaggcatgtagctgtgtagcactgctgttgaatttgatactgttattttttgtactctttatcttaatgtggaacaactaatatttgtattatgcatatattttaggagacgacagaagtcactgacaatctggaactgaaagaatctatattcagagaagtcacttctccaattttggcaacagctaaacggcatgaagggtaccaaacattgtggcagatttgctatgatctcagtgatacaggccttcttcgcagtcttatggtataatcacaataccatatccgcaatttatcccatttaatctttctagggggtacagtgttgactatgttctgcaggcgataacatgccatgtgttattgcaatcaaattgttctttctaccaagttttattaagggacatggttctaatgttgaacttgtgttgcagcatgatagtgtaggacctcacgggggattcagtttctttgttttcaaacaactagtcaacaggcgtcaacatgctaagctattaagattaggtgaagaattcccggaagagctagccaattttctgaaagagcgggatgatcttctgtggcttcatgagatatgcttaaatcggttctcttctgcttcgaagactcttcatactctcgtgagtcctgaggaagatgctaaccttacaagcaacaggaaatcactgtcctttgttgaaagaagacgctttctctatctctccaaaattgcagcagcagcaggttagctgtttcttctcttttacttcatggtatacctgaacctgattaccttacgctgtgcactgccctgaaacaacaatttgttgaggttgcactgtgttaactgttgtggttgataaggaagttgtcattctccatatatcatgctggctctgtgcaaaattggctccaaacaattttttgaaagaaaattctgactatttgatgatggataacttgtatcgaatgctgcgtagcttgattttaaatcagttcatatgagctgtgaacataagctatagttcactttgcagttctttttctgtgcaaaaggacaggcaaacaatgctacttgccatgcttctcgccaagaggctcagtctttttcatggttcaaagaattaattatcctttgaattgctgttggcagtgcatatgtctcaaagtcatgaacattcaatttgatgggggcacctacacctaggtcctgaaatcccgaattccggaacatagttcctgcaccattcttttgcactaattcttgtttactttaacatagttattgtttttttcttatttcttcccttggataaatgcattcctgatatattgcaattttaacaagcaggtaaggatgttgattatgaagtgaaggttgcccatatagatgcagatatccgaattctaaatctgcaggtttgtcatatttcatgttgtacatttatttttctagtcatgatatttgctttcaaacttttagtgtgatgttatgttctttcatatttgccttcacatgtgcatcactttggtagggcaagtgaacccaaatctacgtatcgatgatgaaatctacatttgtgttctctcatgacttcatatgttccataagaccctgttcttttgtacattcatccatcattccattccttgaaaaagacattatcaaaaccagcacactagataggtgtttaactgtccaatgtaacagcctgaccatatttacaacttttacataattgtataattctgtcttatttagctttacgaaagtgttcaagcagtaaaaagaaggaaaataacccatgcaagatttgcatttaaagatgcattgtcttttagtatcaaataagtaggaatgaacagctaaataaactaagttctacctttttctctttcttctctttacaggaagagattgttcagcatgacccagagtatgcaccagataaatatactaccaagccatttcgtccattggaactgatcgagatgtgcctgaagggagatcgagagctctctcttaaagcttttgaagtatttgcttggacgagggcctcgttccggagctccaacaaaggccttctagaggcttgctggatgaatgcagccgaccaggacgactgggttagccttcaagaggaatcttcaggaggttggagcgatgaagtcatccaagaatctcttcagggcactgtcctgttcaatgcctccaggctgtgttatagcccagacgccgtggtgtatgacggttcgtttgaggacgtgctgcctgtgaagaaagaagacgtgcatctgagaggcttggagggcagatgtctctcagtggaggaagtgctgatgcagcacaaggatttccctgatgcgggtaaattgatgatgaccgcggtgataatgggcaaggagctaccttatactgtttccacagctgaacctgttgacatggactcttgatactgtcacattctgtcagggagaaagacctgcaggttgggacctccaaatctgaaatcagagtcaattttcttttctttgcagcacggaatgtgtgcagttccagatgtattcatattgcgggcgaaactatttgtagagactgcaagattttgtcagttcgtgcccttttttagcatgagctgtggcttgaaacgagtttttctcc</dnaseqindica> |
| External Link(s) |
