Os03g0226400

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0226400| Description = Similar to Cation diffusion facilitator 8| Version = NM_001055974.1 GI:115451676 GeneID:4332125| Length = 4876 bp| ...")
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Gene Name

Os03g0226400

Description

Similar to Cation diffusion facilitator 8

Version

NM_001055974.1 GI:115451676 GeneID:4332125

Length

4876 bp

Definition

Oryza sativa Japonica Group Os03g0226400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6664011..6668886

Sequence Coding Region

6664012..6664321,6666308..6666480,6666562..6666760,6666941..6667119,6667212..6667362
,6667701..6667834,6667930..6668109

Expression

GEO Profiles:Os03g0226400

Genome Context

<gbrowseImage1> name=NC_008396:6664011..6668886 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6664011..6668886 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gagacagggagagaagagagagagagagagagagagagcggaggagagaggcggctcgccggctcgagctcgactgctccccactcgcggccgggagggagggagggggagagaaaggagagaggtgattcgatggaggcgaagggggagaatgacgcgcgggcgccgctcctggcggagcggcggcgcaactcggtcgggtcgatgcgcggggagttcgtgtcgcggctgcccaagaaggtgctcgacgccgtcgaccccgagaggccgtcccacgtcgacttctcccgctccaagggcctccgcgaaggagagaaagaatactatgagaaacaatttgccaccttgagatcctttgaggaagttgattcaatagaagaatccaatgtaatgagtgaagaagatgatattgcggagcaaaagcagagtgagtttgccatgaagatatcaaactatgcaaacatgattcttttggcgttgaagatatatgctacaattaaaagtggatcaattgctatagctgcctcgacattggactcgctgcttgatctcatggctggtggtatcctttggttcacacatctctcgatgaagagcatcaacgtctacaagtatcctattggtaaactgagggtgcagcctgttggaatcatcatctttgctgctgtaatggctacattaggattccaagtatttgttcaagctgtggaaaagctgatagtgaacgagactccagataaattgactccagtgcagctcacatggctatattctatcatgatttttgcaacagtagttaagctagccctctggctctactgcagaacatctggtaacaagatagtccgtgcctatgctaaggatcattattttgacgtcgtcacgaatgttgtgggtttggctgctgctgtccttggtgatatgttctactggtggattgacccagttggtgcaattgcccttgcagtgtacacaattacaaactggtctggaacggtgtgggaaaatgcagtgtcactagtgggtgaatcagctccgccagaaatgctgcagaagttgacatatttggccatcagacatcatcctcaaatcaagcgtgtcgatacagttcgagcatacacctttggggttctttactttgttgaggttgacattgagctgccagaggaattgccccttaaggaggcacatgctattggagaatcacttcaaataaagatcgaggagctcccagaagtcgagcgggcatttgttcaccttgatttcgagtgtgaccacaagccagagcacaacattctcagcaagttgcctagcagccaaccatga</cdnaseq>

Protein Sequence

<aaseq>ETGREERERERESGGERRLAGSSSTAPHSRPGGREGERKERGDS MEAKGENDARAPLLAERRRNSVGSMRGEFVSRLPKKVLDAVDPERPSHVDFSRSKGLR EGEKEYYEKQFATLRSFEEVDSIEESNVMSEEDDIAEQKQSEFAMKISNYANMILLAL KIYATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQPVGII IFAAVMATLGFQVFVQAVEKLIVNETPDKLTPVQLTWLYSIMIFATVVKLALWLYCRT SGNKIVRAYAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVW ENAVSLVGESAPPEMLQKLTYLAIRHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELP LKEAHAIGESLQIKIEELPEVERAFVHLDFECDHKPEHNILSKLPSSQP</aaseq>

Gene Sequence

<dnaseqindica>2..311#2298..2470#2552..2750#2931..3109#3202..3352#3691..3824#3920..4099#ggagacagggagagaagagagagagagagagagagagagcggaggagagaggcggctcgccggctcgagctcgactgctccccactcgcggccgggagggagggagggggagagaaaggagagaggtgattcgatggaggcgaagggggagaatgacgcgcgggcgccgctcctggcggagcggcggcgcaactcggtcgggtcgatgcgcggggagttcgtgtcgcggctgcccaagaaggtgctcgacgccgtcgaccccgagaggccgtcccacgtcgacttctcccgctccaagggcctccgcgaaggtaccacgctggacagccctccccgcattacttctttgtaaagcgcgttctgatctttcccccgttttcgatctgtcctttgtccttttaggtttggctgtggcaacgttgcatgaaagttgtgattctttttaggctctcctttttgttagtcatcacttgggtgttggtgagtttgtctttggggtttggctgtagtagcttttcagaattacggtggataatgccgttcttgctggtgatcgcgcggtcgatgttgttgtatggatggaaatcgccttctattcttgattcaccatccacttgcgcgtgcttggtagttgtgtgtcgtcctttggtataccgtttgacggtgacggatcaagttcgtgggtttactatcttttggttcgcatttttacggtcttttcatatggttttagcgattgtaacatattgaatgactcctaatagaatgacacgcagatctccttctggttctaaagaataacaggtggcgatttatcccgactataatgttttcatgcatgctcctaggcaaaggtcattcgttatatgttctttaaaaaatgctaagcagctatcaattgtgtacgaaaaatctttcaggacaatgttatttctttcttgctctgatgctctctctaacggacatgctcttttttttttagccaaagggggaagaagagtacatagttcaagagatacaaccaatataaagaaaaggcggtagcttgggtagggggagggctatctcgcagcccatctagagttcttttttttaaaaaaaaaatctaaattgctagaaaggaaactgttgtcgaagttaaaggaattacacatcaaggagaacatctccgtttgatctttctgtctcctctgcatttcttctttgtccaggagaaccaggacttccactgttccacagtctatttcctccaccagaacagtactttttctccggtcctggtcaacgtaatacaaaacatgggtataccggcctttgtttacctgaaattttagctgtgccttttttaattctgcctgcctgccgttcaattcattttagcactatatacttccctttccaactttggtctttatgtcttttgaaattgtagcttagatactaaaacacgtcaagactaaattacagtttgtcaaaccgaggtgatatgtagattatacaaaaaccagccggcgttggctgttaataccaatatatttgtaaggatgttctgcatctaccagtggaaatttttgacttctctaccaatagcatgtactaaaaatttggttacgagatttcattggttgtacatttaattattgtattgccattttgttccctgtctctttctttaaaataagtgaggtgggtgggatgtattttatttatttttaatccacgatttgatgtaaccctgcctagctgtatcaggattgtgagactgtcaattgtcgctaagtggaaaaacatacacctttacttttcataaacgactacaaactgtgttaaaaatggtgggatgaaaacacttaatgcaaatattacgaaataagtaatactctttgtatcagggagagaaatatagaagtataatgtggtgtttactctttagtatttcttatgcagtaagttctcagttgtatgaatcaccacatatctttcttgtactgacattaagtatagagataagatttgcaaatcctggactataataaactagtttttattgttcctatattcacatcattttttagagtttgttcttattaataattttttcactacaaactcttaatataactgttaagataaggtgtgcccaatgtgttatacggcttattcctaatatttcataaccctggacaaactccccatgatccatatgaagggtaacaccaattaaattctctctttttatatgctcaaaagacactgctttccttcatgtgatatggttaccttttgggctaatataggagagaaagaatactatgagaaacaatttgccaccttgagatcctttgaggaagttgattcaatagaagaatccaatgtaatgagtgaagaagatgatattgcggagcaaaagcagagtgagtttgccatgaagatatcaaactatgcaaacatgattcttttggcgttgaaggttgtactttcccgattcattttaatcccttttttaacattcatctaggctgactttattatacttccacaccatcattagatatatgctacaattaaaagtggatcaattgctatagctgcctcgacattggactcgctgcttgatctcatggctggtggtatcctttggttcacacatctctcgatgaagagcatcaacgtctacaagtatcctattggtaaactgagggtgcagcctgttggaatcatcatctttgctgctgtaatggctacattaggtatgcttgcaactttgccaggacaagaatggacaatcaattcatgtctttacttgctttctttgtatatgcaacagtattgttgtcttcaaactacaaaatttattactcaacttagtatggtctttgtgccaaaattatgcattaacacagcaatgtgctttttatttgcatttccaggattccaagtatttgttcaagctgtggaaaagctgatagtgaacgagactccagataaattgactccagtgcagctcacatggctatattctatcatgatttttgcaacagtagttaagctagccctctggctctactgcagaacatctggtaacaagatagtccgtgcctatgctaaggtttagatctttctccatgttttaatttcaatagatgctttgaaaggcaaatgagtgcagtttcccaaagtttgttgggttggtattcacaggatcattattttgacgtcgtcacgaatgttgtgggtttggctgctgctgtccttggtgatatgttctactggtggattgacccagttggtgcaattgcccttgcagtgtacacaattacaaactggtctggaacggtgtgggaaaatgcaggtttgcagtactccagcatctgttgcattcgtttataattggcctacccccctcccacatccattatctgttgtcgtagtaaaaagtttcataccagaactcttgttaggatcaattgctttgataggcctaatggacatggaaatctgatgaactaaacccatgcaagaagcaggattgtagggaacatgtttttccgaaaaaaaatatataaattgactcaccatataagtgtaattcctgcacaattccttatgtgttctgaaagttacttactagattaactggcagatagtcgtatactgaattaatgatgcttattgctatccttgatgcagtgtcactagtgggtgaatcagctccgccagaaatgctgcagaagttgacatatttggccatcagacatcatcctcaaatcaagcgtgtcgatacagttcgagcatacacctttggggttctttactttgttgaggttggtacctcagtttttctgttgccttgctgtttttttcccttttaggtaaatatatatgctcttcccagctaatttgatcaacggactggcaggttgacattgagctgccagaggaattgccccttaaggaggcacatgctattggagaatcacttcaaataaagatcgaggagctcccagaagtcgagcgggcatttgttcaccttgatttcgagtgtgaccacaagccagagcacaacattctcagcaagttgcctagcagccaaccatgaccaccaacttgaattccaccgtgaaacgaattagctggcttgttcgcttgccatgcaggatgtgctacagtacgtgccgcattatgctatatgaaacggctgaagacaaatgagattgtctggccatcatttctgaaagtaggcctaagagaatactgtattagttaagtacctatattagagattatgtggactgaacttgtgcatccctctgtttaagagttttgttgtgaggaaagttcagcacaaaggggaaatcacgttctggatgatctcaagcaatttttttgttctgaaattcaggtcagttgtaaatattgtctggtttgcttaacaatggtgtgtaagtgccctacattgctgggaaggtcaaggtgtatgtgctaaaagaaactcattttaacaaatgtggttttgcctttttcagcccaacatcaggcccagcactctttccaaattgagaaaggaaaacagaactggcccagtaggtgtaaactggatgcaaagcaatgcacccggcaaacatccagcaaacaacaagcagtaaaaatttacaacgtaaagcctcttcgatagaccggatattttcatttattgaatttgaaattcttttgaaatttcttcacagtgcaagtacttctattaggattgtaggatgattcttctgcagttgtaccctttgtcactagtggttgtaccattgcagtccgtagtacggccgtgggactgtctgtaagccacgcattattggctgaaatgctgaattttagtagatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0226400, RefSeq:Os03g0226400