Os03g0227400

From RiceWiki
Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0227400| Description = Glycoside hydrolase, family 17 protein| Version = NM_001055980.2 GI:297600574 GeneID:4332132| Length = 4085 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0227400

Description

Glycoside hydrolase, family 17 protein

Version

NM_001055980.2 GI:297600574 GeneID:4332132

Length

4085 bp

Definition

Oryza sativa Japonica Group Os03g0227400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6733597..6737681

Sequence Coding Region

6734225..6734932

Expression

GEO Profiles:Os03g0227400

Genome Context

<gbrowseImage1> name=NC_008396:6733597..6737681 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6733597..6737681 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cagatctcgaccgtgcattccatggcggtgctctcgtcgtcggacccgccgtcgtcgggcgcgttccacgccgacctcgccgggagcctggacccggtgctggacttcctgaagcagaacggcgcgccgttcatgatcaacccgtacccgtacttcgcctacgcctccgacacgcggccggagacgctggcgttctgcctgttccagccgaacccggggcgcgtcgacgccgggtcagggctcacctacaccaacatgttcgacgcgcagctggacgccatccgcgcggcgctggacgccaaggggtacagcggcgtggacatcgtcatcgccgagaccgggtggccgtacaagggcgacgccgacgagggcggcgccacggtggacaacgccagggcgtacaacggcaacctcgtcgcgcacctcaagtcgcaggtcggcacgccgcggacgccaggcaaatcggtggacacgtacctcttcgcgctctacgacgaggacctcaagggtgggccggagtccgagcggtcgttcggcctctaccggactgacctcacggcgaactacgacatcgggctcgccgccgctcccggcacggcggctccggccaccgttactccagttacggtgcaggtttcatcgatgctcgttgcctaccgattctgcctgcagtctttggatcgaatggaatggacgtccctgatctga</cdnaseq>

Protein Sequence

<aaseq>QISTVHSMAVLSSSDPPSSGAFHADLAGSLDPVLDFLKQNGAPF MINPYPYFAYASDTRPETLAFCLFQPNPGRVDAGSGLTYTNMFDAQLDAIRAALDAKG YSGVDIVIAETGWPYKGDADEGGATVDNARAYNGNLVAHLKSQVGTPRTPGKSVDTYL FALYDEDLKGGPESERSFGLYRTDLTANYDIGLAAAPGTAAPATVTPVTVQVSSMLVA YRFCLQSLDRMEWTSLI</aaseq>

Gene Sequence

<dnaseqindica>2750..3457#gagctcctttgagtcttcgaccatttcactgatcccaagtagtagccataattggactcgaacatctgagaagctgcggcgagattgcatcaagcagtaggattcttgttgctagtagcttggctggcagtggtggcatgggggcgaggaggtggctggatgctgctgtcacctctgggctgctgcaagcgctcctcttccacttggcaagtaagttctttccgcgctagagcgcttctttctcactcaagctgtctcctgcgaattgtgccagtgattcgttgcttcttgtacatcattgacatgctaccttgttgtttcttatcgcggtgaaagttttgatttcgtttttgcattttgttggtagatagatagatgaaatggtatcaccgaatcatcttcagatcatgtttcgctcgctggatgcttattaactggttagcttagttcggttttggaatagtggaacaatggcttcactttcgttgtgattctttgttcctcgaattagcgtactgcactagaatactttagtcagttcagcgaagtggtaggacgaaattctgcgtcgtttttacggatgcaggttactcattcgtgccgagttaccgaaccttttctagcttccggaatggtgagcaaagaagatggcgattgatggcacatttttttttctaataaataggtggggaggatttgatgagatcttacttttttgctccgagaaattgagatttcgccaacacgaggggcaaagtggggagagaaatggagtttctctgccacgactcctgatcatattcccaacgcctagataaagagaggaattattttgggattgcattcaaaagcgacggttaattatacagaacaccatatattgtttgttagagaaaactctttatttaatacctaaagcacttatcagtctacataacgtatgaaatcggttattgtgcccctaaagtacgaaaagcgttccacataaagtattctatagtttctgggaggtacttttaagctagttaaagagatatgatattaggtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtttatagagataagtgcacgcatgtgtatgaatatttacgtttataccgtgttccaaaaaaacaacatatcaaagttgtttggaagttttttttattttctaaagaaacatgtgaggatggtttgtaagtgttcttttaggcggtgatgcgaccgagtggtattgtttgcatgacagacacgttaaccaatttcagccgaatagttcaatcactaactttctccgatcacgttacttctttcctaagccgctatagttaggagtaaaaatgcatttaatcaattacatcctcatgtcactgtgtgttcgtcgtggtcccggtggccaaaaccactctacaggttatttgaaccaatttcatacttttgggagataatttacccggttgttccatactttataggattaatcagactttttcaacgctttattctcaaacggtagaaatggtaagaagccgttgtgctatggctgttgactttgtagctaaacattgcagagacccgaagttgactcttccttttttttgaaaaagaaaaaaagaacagagcaacttggcatgaactgtaatctgcgctagctgcatatgaaccatgctcaatttacattggcctggtgaggtgacttttaccaacgattcgcattgagtacaccaaaagggttggtcaaggaatctagcaaataccaaatcaaatatccaaagcataggagccaacactcgtgggcgcaagatccatcacctaacggccgctagaatagttggaggctttattttgggggagaataattcgaacttgaccaacaggcaacagctctcgccattggccaaacaaagaggaacaatgatcacgcttcacgcccggcagcatttgacagataatggctgccccaaagaggccaaagctgtacaacgcagctcgtcctgttgctatccaactactgctctggaggtagtacgtttgcgtgtgctctcaccactgccatatgcttaacgtgacaattaagtaattattagcagatgctgcgcgtacgaagtttgcgacagcgttggccatgtgaatttgtatgtgaaatgaattttgctgaaattttgtaaacttggatttctcatgcgagtttgattgatatttgcagcgtcgcagtcgttcatcggagtgaactatgggacgatagccgacaacctcccgccgccggcgtcgacggccaacctgctgaagtcgacgtccatcggcaaggtccgcctctacgagccccagccggacctcgtcgccgcgctcgcgggctccaacatctccatcctcctcggcgtcccgaacggcgacgtccccaacctcgcgtcctccccggcggcagcgtcggcctgggctgccgcgaacatcccgaccacggtgcccgtctccgccatctccgtcggcaacgagctgctcaactccggcgatcccaccctcgcgccgcagctcctccccgccatgcagaacctcctcgccgcgctccccgccggctcaaccaccaaggcacgtatctcatcacagcatctctacgtacgcatcgcggtggtttcttgaacgagtttgcggttgactagcagatctcgaccgtgcattccatggcggtgctctcgtcgtcggacccgccgtcgtcgggcgcgttccacgccgacctcgccgggagcctggacccggtgctggacttcctgaagcagaacggcgcgccgttcatgatcaacccgtacccgtacttcgcctacgcctccgacacgcggccggagacgctggcgttctgcctgttccagccgaacccggggcgcgtcgacgccgggtcagggctcacctacaccaacatgttcgacgcgcagctggacgccatccgcgcggcgctggacgccaaggggtacagcggcgtggacatcgtcatcgccgagaccgggtggccgtacaagggcgacgccgacgagggcggcgccacggtggacaacgccagggcgtacaacggcaacctcgtcgcgcacctcaagtcgcaggtcggcacgccgcggacgccaggcaaatcggtggacacgtacctcttcgcgctctacgacgaggacctcaagggtgggccggagtccgagcggtcgttcggcctctaccggactgacctcacggcgaactacgacatcgggctcgccgccgctcccggcacggcggctccggccaccgttactccagttacggtgcaggtttcatcgatgctcgttgcctaccgattctgcctgcagtctttggatcgaatggaatggacgtccctgatctgatctccatgtctttttttggtttttgcagaacacgccgcagccgagcagagggatgacgccgacggggtactgtgtgacggcggccggcgtgccggggacgacgcaggggcagcaggtgccgcagaccagctcgtgctacatccccgcaggcgcggtttcgcggcgagctgacgccgccgtgcgtcggcttgtttggcttggagtgttgctttgcctggtgactttagtccgcaagtagatggctgcgtaggtacactccctccgtccaaaaaaaaagacaaacccgggttgccgtgtctaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaaattaaaaagacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaattataaaaaaatttcatatgagacggacagtcaaagttggacacgaaaattcagggtttgcctttttttctgagacgaagggagtatacgtactaggtacccgtcacctgctaagaggaaaagacacgtactccacatacttttgtgaccaacttggtatcattgtgcatatgaatagtgacatgtcactagataatatttctacgaagttgcacataa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0227400, RefSeq:Os03g0227400