Os03g0235100

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0235100| Description = Similar to Pg4| Version = NM_001056019.1 GI:115451766 GeneID:4332176| Length = 3409 bp| Definition = Oryza sativa J...")
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Gene Name

Os03g0235100

Description

Similar to Pg4

Version

NM_001056019.1 GI:115451766 GeneID:4332176

Length

3409 bp

Definition

Oryza sativa Japonica Group Os03g0235100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7181892..7185300

Sequence Coding Region

7182115..7182337,7182446..7182552,7183942..7184073,7184216..7184372,7184932..7185053

Expression

GEO Profiles:Os03g0235100

Genome Context

<gbrowseImage1> name=NC_008396:7181892..7185300 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7181892..7185300 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcctctcccgcatcgtcctccgcgacctggactccatcgactcccccgccgcctccatggcgtcctccaagaagctggtgacgcgtgacgagtgggagcggaagctccgcgacgtcaagatccgcaaggaggacatgaaccgcctcgtcatgaacttcctcgtcaccgagggcttcgtcgacgctgcggacaagttccgcgtcgagtccggcacccaaccggatattgacctggccaccatcacggatcggatggaggtgaagagagcggtgcaatcagggaatgttcaggaggccatcgagaagattaacgatcttaatcccacgattctggacacaaatccccaactgtactttcatctgcaacaacagaagctaatagaattgattcgtgcgggaaaaataaatgaagctttggagtttgcacaagaagaactcgctccaagaggcgaagaaaatcaagtctttcttgaagaaatagagaaaactgtagcacttttggtttttgaagatataaagaactgtccatatggggaactattggatgtttcccaacgattgaagaccgcaagtgaagttaatgctgccattcttacaagccaaagtcatgagaaagatccaaagctccctagccttctaaagatgttaatttggactcaaaaccaactggacgaaaaggcagcatatccacgaatcaacaatttctccactgccgcacttgaagatccagcgatttga</cdnaseq>

Protein Sequence

<aaseq>MFLSRIVLRDLDSIDSPAASMASSKKLVTRDEWERKLRDVKIRK EDMNRLVMNFLVTEGFVDAADKFRVESGTQPDIDLATITDRMEVKRAVQSGNVQEAIE KINDLNPTILDTNPQLYFHLQQQKLIELIRAGKINEALEFAQEELAPRGEENQVFLEE IEKTVALLVFEDIKNCPYGELLDVSQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLI WTQNQLDEKAAYPRINNFSTAALEDPAI</aaseq>

Gene Sequence

<dnaseqindica>224..446#555..661#2051..2182#2325..2481#3041..3162#gtcctctcctcgtctctctctccccaacctactctcttctcctgcagtccagctctcggttccttgctcctccaagtctccgtcggatccatcctcccctaccccgcgaaaccctagcctcccgagcccctcgccgccggcggatggcgacggcttgatcggccctggacacccgccccgcctcgcctcgcctctgcctctccccgctccccccgcgcatctgatgttcctctcccgcatcgtcctccgcgacctggactccatcgactcccccgccgcctccatggcgtcctccaagaagctggtgacgcgtgacgagtgggagcggaagctccgcgacgtcaagatccgcaaggaggacatgaaccgcctcgtcatgaacttcctcgtcaccgagggcttcgtcgacgctgcggacaagttccgcgtcgagtccggcacccaacgtatctaatgccgcgcgtaccccgccgtcgcacgctcatctgttcccctgctggggtttcatggatttcttttttagtgaacttttttttttggtgtcccttttgcagcggatattgacctggccaccatcacggatcggatggaggtgaagagagcggtgcaatcagggaatgttcaggaggccatcgagaagattaacgatcttaatcccacggttcgattccattacttactctagcaatttttgtgccacctcgaaatctcgaatgttgaactgcctttggtggtgacggtggaggggcagcaatggtgttgcagaattgggttctacctgagataagaatgtcatagtagcctttgttgttgtttagtaatgctagttttggtgcttccctggggtatgagaattggacaacgagaaggatggttgtttctttctgaaatttagagggccagctagttttggaatcgagggcaaagtccttgaccttgtccgtgttttctgtgcttggcgtctttcgatgattaatgaatactgtttatttattgtattgtgggaattaagtagagatgatggaccacttgatttgtcaaattggattttgccaactggttatttgttcttgcctcttgtcaataactaggttagtgctcctcttgtcaataactaggttagtgctgtctagttaaacacatgcccaaattttagtttccttttctgggtctaaggattattgtggtgtattttatttgacaagttgtttatattttggaatcatgaagcttattcaattttcaaacatgccaaattttttttattcaattggacggggagaaattggaaaagtgaataaccttgaactatgcgaactattcttccctgttttttttttttttttttttttttttttttttttgctttacatgctagttttctgcgataagtttgggaacatttaacttaattggaactgattttggtgagctcctgacataaatcataaagttcagacttgagcactatagtgttattgttcagagtactgacgtgatccccaaggatctaacatattttcataaatatcctgtaacacattggaacaaaatgtctcttgctctattcaccgttaaaatcttcacagtttcttttttcaatgtcccttttaagttcatcaatccaatgatgttgctccattgactcctcggtaccgaggtgtgtctactgtggtaaatggcagctctgatcatgttatttgggaaaaaaagactcaacagattggtcataaatactttttttagtattttactcctttctttaaacaactcagaaaatatctacgggaatccagaaattacatacgtggttgattgacgaactgttcatatcgacagtattggccatcatgtgatgtgcaatcaaatcttctccaagtttgacagtttatgtaccttaaaagagcacctagaagccttgtgaaacaacaccttaaatcaaaagtcattctcttaatgctgtatgttctgctgcgatgaattttgtaaattaacaggaagagttctttaacttctgattcttcatcctgacttaacttcccatgtgcagattctggacacaaatccccaactgtactttcatctgcaacaacagaagctaatagaattgattcgtgcgggaaaaataaatgaagctttggagtttgcacaagaagaactcgctccaagaggcgaagaaaatgtagttttctcaatatttgctacttcagttctgattcagcagttcaaatcacctaattaaaatgttagagagatttctttgaatagttctgttaacatcacactttgctgtgacttttggttcttttctttttattctgcagcaagtctttcttgaagaaatagagaaaactgtagcacttttggtttttgaagatataaagaactgtccatatggggaactattggatgtttcccaacgattgaagaccgcaagtgaagttaatgctgccattcttacaagccaaagtcatgagaaaggttagcacatgtgctttgatatagtattcatattgagacctaatatcacttggttatgttatcatgtatctacattgcaataccagttttgtgcctataataagttttcattacttaaataaataaagatccacaagtgtaaatcttaatcaggaaatgagaatgcacagaatgtggggtgcctgttctcattttatacattgaaacaaatgaatcacccatttatgtgggattttctgccacgttaaaaacaacaaaggcttaactgaaaatctttcagagactaaccacaaagttactaataatactgacaagaatgggttgaagaaagggcactttgcagtgtggtactaacagatctatctattttgatgattttaagatatagtgatcagatttgcactagatttcagttttgttgctcattgattatattttttttcttttttacaatagagttgaagttgatatactgtttggaacttggaatcaataaaatgctggtccggaatgtgacttttactgaagttattttgtatatgtttcccacataatgcagatccaaagctccctagccttctaaagatgttaatttggactcaaaaccaactggacgaaaaggcagcatatccacgaatcaacaatttctccactgccgcacttgaagatccagcgatttgaggccgctcgggaggggatggctaaagaatgtaggcaccataccatgactgttttcacacattgtacttcctggatctgttgtgctcttcacctgcaaggctgcaacagtgaatccagtgctttcttcggtctttgatctcaaatgcaaaaaacgtggaatcagaaaaaaaaatcgctcgtgttgtacatgatgtagaagatgttcatcacattttaatctgtgaaaaatgttcgatttgatttgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0235100, RefSeq:Os03g0235100